- Table of contents
- GRSF
GRSF¶
Task 2 in WP5 is to deliver the Global record of Stocks and Fisheries.
The (dynamic) GRSF VRE plan is available in the BlueBridge project wiki
The relevant deliverables are:
Objective¶
Providing scientists with an innovative environment supporting a collaborative, efficient and effective production of a comprehensive and shared global reference set of unique stocks and fisheries information that will boost regional and global environmental status monitoring as well as responsible consumer practices.
Requirements¶
- GRSF records, an overview - overall requirements
- GRSF stock status descriptors
- GRSF area standards
- GRSF Model-Traceability Unit
Competency questions are used to inform the developers on the need of the intended audience for the retrieval and representation of data stored in the KB.
End user delivery
The UI, reports, and other required user delivery is described hereGRSF KB
FORTH - Tools and Services for supporting the construction of the GRSF Knowledge Base
Expectations¶
RAM
- main focus on data downloading & filtering, rather than on data viewing for a single species/stock (or both). I.e. don't want to make users download data one stock at a time.
- ability to download data under a set of filter criteria, including the ability to download some data types for all stocks (or fisheries) at once. E.g. quickly filter to obtain data of a particular type for all stocks in a particular region, ocean, taxonomic group, country, etc.
- for every stock, have a list of the FAO area(s) and other area delimiters in which it is located (I know some of this will be in the unique identifier, but I'm thinking about area codes that are not in the unique identifier)
- if there is a stock-by-stock page, ability to link to the RAM Legacy and/or FishSource sites, as well as the webpage for the original assessor agency and the stock in particular, for further information about the stock
- if there are any ambiguities, e.g. time series or other information that do not match perfectly between RAM and FishSource, flag those for internal inspection as well as so users are aware they may need to visit the original source materials.
- similarly, ability to link to FishBase, SealifeBase, IUCN, FAO species pages, etc.
- if there is a stock-by-stock page, have a summary figure showing all data types available and (for time series data), the range of years available for each data type
- ability to download stock metadata and names in other databases. E.g. this would contain the Latin name used in the assessment, in the FAO landings database, and in FishBase (which are not always the same), same thing for common names, would also give the FAO 3-letter species code, the FishBase numerical code, etc.
- ability to search the text inside of PDF documents that are linked to each stock
FishSource
Many stakeholders from industry, NGOs, technology companies, etc believe the success of technology companies to develop seafood traceability solutions to meet the future global demand is based on standardized fishery identifiers. To that end, SFP is collaborating in BlueBRIDGE with the following expectations (broken down into 'must-haves' and 'nice-to-haves'). In addition, we share many of the same expectations listed under RAM (which we do not repeat below).
Must-haves (ie, as part of v1 of the GRSF)
- A standardized and globally-accepted identifier system that could be used by managers, scientists, the seafood industry, and will help support (and evolve with) increasing demands and trends towards traceability, including a database of machine-readable unique identifiers for individual fisheries that other systems can pull from (eg, via API)
- Ability for other systems to submit ‘new fisheries’ for inclusion into the GRSF and unique identifiers database (perhaps starting with RAM/FishSource and then others)
Nice-to-haves (ie, as part of v1 or v2, depending on time/resources available?)
- Enhanced or newly created source lists/databases to support/strengthen the use and applicability of the unique identifier (ie, for the GRSF to draw from):
- A standardized list of fishery management units
- A standardized list of management organizations and assessment organizations
- A more complete and detailed coverage of the FAO Fishing Areas and Sub-areas
- Automated sharing of data back and forth across systems (eg. if RAM uploads most recent biomass and landings data for Barents Sea cod, FishSource would get an alert to review and approve the data to be automatically pulled into its database). We believe this links with RAM’s 5th bullet
Meetings¶
- 23-07-13 FishSource captures misassigned to Fisheries rather than Stocks in GRSF (FAO, SFP)
- 23-07-07 Discussing operators in semantic codes and the GRSF namespace (FAO, FORTH?, SFP)
- 23-05-26 Discussing GitHub and other area related issues (FAO, FORTH, SFP)
- 14-15-16 February 2023 - BC2026, side events to discuss the ongoing developments and future engagement for the GSRF, Tuna Atlas, and the Fisheries Atlas. (CNR-ISTI, FAO, FORTH, IRD)
- 12 January 2023 - New year call discussing the SFP Area database and the GRSF (FAO, SFP)
- 10 November 2022 - Discussing the SFP Area database and the GRSF (FAO, SFP)
- 13 October 2022 - Discussing the GRSF github vocabulary (FAO, FORTH)
- 12 October 2022 - Improving area standards and news from the developments (FAO, FORTH, FishSource, RAM)
- 1 July 2022 - Discussing traceability units and area codes (FAO, FORTH, FishSource)
- 17 June 2022 - Discussing representations of area codes and polygons in maps(FAO, FORTH)
- 30-31 May 2022 - Discussing new GRSF developments with CNR and FORTH (CNR, FAO, FORTH)
- 4 April 2022 - Adding new area codes in GRSF KB (FAO, RAM)
- 29 March 2022 - GRFS Import New Records (FAO, FORTH, RAM)
- 23 March 2022 - Discussing the new concept Traceability Unit (FAO, FORTH, FishSource)
- 1 March 2022 - Discussing area code standards (FAO, FORTH, FishSource)
- 21 December 2021 - Testing GRSF UUIDs for traceability (FAO, FishSource)
- 2 December 2021 - Discussing area code standards (FAO, FORTH, FishSource)
- 24 September 2021 - Preparing the FIRMS TWG on GRSF (FAO, RAM)
- 22 September 2021 - Preparing the FIRMS TWG on GRSF (FAO, FishSource)
- 5 July 2021 - Switching to Polygons (FAO, FORTH)
- 22 June 2021 - Outcomes from the FAO internal seminar on GRSF (FAO, FishSource, FORTH, RAM)
- 20 May 2021 - Blue Cloud in FAO - intro for MSC (FAO, MSC)
- 6 May 2021 - GRSF - Additional requirements for fisheries traceability (FAO, FishSource, FORTH)
- 11 March 2021 - FishSource to GRSF workflow (FAO, FishSource, FORTH)
- 22 February 2021 - Preparing GRSF webinar (CNR, FAO, FishSource, FORTH, RAM)
- 16 February 2021 - Discussing area standards (FAO, FishSource, FORTH, RAM)
- 11 February 2021 - Discussing issues with FishSource (issues on area, e.g. ticket 19744, approval workflow, (FAO, FishSource)
- 7 October 2020 - Finalizing the new data harvest workflow (FAO, FORTH)
- 9 June 2020 - New developments from FORTH (FAO, FORTH)
- 5 June 2020 - GRSF Service migration to gCat (CNR, FORTH, FAO)
- 2 June 2020 - New developments from FORTH (FAO, FORTH)
- 26 May 2020 - New developments from FORTH (FAO, FORTH)
- 19 May 2020 - New developments from FORTH (FAO, FORTH)
- 5 May 2020 - Discussing GRSF topics with FishSource (FAO, FishSource)
- 24 February 2020 - Triggering new activities (FAO, FORTH)
- 11 December 2019 - FishSource follow-up on the GRSF pilot release (FAO, FishSource)
- 16 October 2019 - Towards pilot release (FAO, FORTH)
- 3 October 2019 - Towards pilot release (FAO, CNR, FORTH)
- 20 September 2019 - Towards pilot release (FAO, FishSource)
- 13 September 2019 - Towards pilot release (FAO, RAM)
- 11 September 2019 - Towards pilot release (FAO, RAM)
- 26 March 2019 - Towards pilot release (CNR, FAO, FORTH)
- 20 March 2019 - GRSF Tickets (FAO, CNR)
- 25 February 2019 - Training on GRFS VRE (FAO, RAM)
- 21 February 2019 - Discussion on actions needed for the pilot release (FAO, FORTH)
- 13 February 2019 - Training on GRFS VRE (FAO, FishSource)
- 7 February 2019 - Training on GRFS VRE (FAO, FishSource)
- 16 January 2019 - Training on GRFS VRE (FAO, FishSource)
- 8 January 2019 - Training on GRFS VRE (FAO, FishSource, CNR)
- 19 December 2018 - Training on GRFS VRE (FAO, RAM)
- 14 December 2018 - Towards pilot release (FAO, FishSource)
- 11 December 2018 - Towards pilot release (FAO, RAM)
- 16 November 2018 - GRSF bugs check (FAO, FORTH)
- 19 October 2018 - GRSF approvals of records (FAO, FORTH)
- 7 June 2018 - Traceability aspects (FishSource, RAM, FAO, FORTH, CNR)
- 18 May 2018 - GRSF webservices (Agrocampus Ouest, CNR, FAO, FORTH)
- 9 May 2018 - Traceability aspects and towards the GRSF pilot release (FishSource, RAM, FAO, FORTH)
- 9 May 2018 - Towards the GRSF pilot release (CNR, FAO, FORTH)
- 15 March 2018 - Finalizing GRSF requirements (RAM, FishSource, FAO, CNR, FORTH)
- 26 February 2018 - Reviewing the competency queries (FAO, FORTH)
- 26 February 2018 - Reviewing the implementation of the GRSF management panel (FAO, CNR, FORTH)
- 18 January 2018 - Discussing the matter on GRSF business model with IATTC colleagues (FAO, IATTC)
- 16 January 2018 - Discussing with CNR and FORTH data policy aspects including citation credits and disclaimer examples (FAO, CNR, FORTH)
- 12 January 2018 - Discussing the matter on GRSF business model with CNR and FORTH colleagues (FAO, CNR, FORTH)
- 11 January 2018 - Discuss the implementation of the GRSF management panel (FAO, CNR, FORTH)
- 10 January 2018 - Discuss the status of work and way forward (FAO, CNR, FORTH)
- 10 January 2018 - Discuss the ToC for Public Consultant Report and Doc pre EAB TWG3 on GRSF (FAO, N. Bailly)
- 22 December 2017 - Discussing with FishSource data policy aspects (FAO, FishSource)
- 21 December 2017 - Discussing with RAM data policy aspects (FAO, RAM)
- 20 December 2017 - Discussing with Mr Yann Laurent data policy aspects regarding the RDB use case (FAO)
- 13 December 2017 - Discussing the matter on GRSF business model with FishSource colleagues (FAO, FishSource)
- 11 December 2017 - Reviewing the pending issues with FishSource (FishSource, FAO, FORTH)
- 5 December 2017 - Introducing the matter on GRSF business model to RAM colleagues (FAO, RAM)
- 30 November 2017 - Reviewing the work done on GRSF Knowledge (FAO, FORTH)
- 29 November 2017 - Feedback on GRSF Admin VRE (FAO, RAM)
- 17 October 2017 - GRSF governance & sustainability (FAO, FishSource)
- 26 September 2017 - Discuss the status of work and way forward (FishSource, RAM, FAO)
- 20 September 2017 - Planning improvements for the GRSF for the next TCom (CNR, FAO, FORTH)
- 10 August 2017 - GRSF governance & sustainability (FAO, FishSource, N. Bailly)
- 05 August 2017 - Review GRSF catalogue and UUIDs (CNR, FAO, FishSource, FORTH)
- 02 August 2017 - Discussion on GRSF validation & Workflows (CNR, FAO, FORTH)
- 26 July 2017 - Discussion on GRSF validation & Workflows (CNR, FAO, FORTH)
- 11 July 2017 - Review Management Entity logic and mapping (FORTH - FAO)
- 26 May 2017 - Review FishSource data extraction according to the new GRSF rules and standards (FishSource - FORTH - FAO)
- 11 May 2017 - Review RAM data extraction according to the new GRSF rules and standards (RAM - FORTH - FAO)
- 5 May 2017 - Review FIRMS data extraction according to the new GRSF rules and standards (FORTH - FAO)
- 11 April 2017 - GRSF development work plan is discussed following the 4th TCom and the circulation of the report for the EAB TWG2 on GRSF meeting (CNR - FORTH - FAO)
- 14 February 2017 - Preparing the BB EAB Technical Working Group Meeting on GRSF with FORTH, Agenda item: GRSF Standards and guidelines (FORTH - FAO)
- 14 February 2017 - Preparing the BB EAB Technical Working Group Meeting on GRSF with FishSource, Agenda item: Governance and Sustainability (FishSource - FAO)
- 7 February 2017 - Preparing the BB EAB Technical Working Group Meeting on GRSF with FORTH, Agenda item: GRSF Standards (FORTH - FAO)
- 26 January 2017 - Presenting the GRSF Catalogue and the VRE GRSF-Admin: application and content related issues, and how to move forward (RAM-FishSource-FAO)
- 26 January 2017 - GRSF sustainability and business model for the stock/fishery unique ID service for seafood industry. (FishSource-FAO)
- 19 December 2016 - GRSF Implementations, where we stand, what is missing for the first release (CNR-FORTH- FAO)
- 7 December 2016 - GRSF Implementations, where we stand, what is missing for the first release (CNR-FORTH- FAO)
- 6 December 2016 - GRSF KB: cross-check competency queries (FORTH-FAO)
- 1 December 2016 - GRSF Implementations, where we stand, what is missing for the first release (CNR-FORTH- FAO)
- 30 November 2016 - GRSF KB: cross-check competency queries (FORTH-FAO)
- 22 November 2016 - GRSF Implementations, where we stand, what is missing for the first release (CNR-FORTH- FAO)
- 13 October 2016 - GRSF merger: provide clarifications on logic and criteria to identify similar stocks or fisheries (FORTH-FAO)
- 28 September 2016 - Data Source: FishSource, further clarification with FORTH - (FishSource-FORTH-FAO)
- 27 September 2016 - GRSF requirements on geospatial standards - (FAO)
- 12 September 2016 - FORTH reporting on GRSF implementation progress and questions - (CNR-FAO-FORTH)
- 6 September 2016 - GRSF overall architecture - (CNR-FAO-FORTH)
- 4 August 2016 - GRSF requirements wrap-up - (RAM-FishSource-FORTH-FAO)
- 14 July 2016 - GRSF elements of the database and UUIDs - (RAM-FishSource-FAO)
- 6 July 2016 - GRSF elements of the database and UUIDs - (RAM-FishSource-FAO)
- 29 June 2016 - GRSF overall architecture - (CNR-FAO-FORTH)
- 23 June 2016 - GRSF UUIDs - (RAM-FishSource-FAO)
- 9 June 2016 - GRSF elements of the database and UUIDs - (RAM-FishSource-FORTH-FAO)
- 31 may 2016 - GRSF elements of the database and standards - (RAM-FishSource-FAO)
- 19 May 2016 - Data Source: RAM, further clarification with FORTH - (RAM-FORTH-FAO)
- 6 May 2016 - Data source: FIRMS, further clarification with FORTH - (FIRMS Secretariat-FORTH)
- 15 Apr 2016 - GRSF overall architecture - (CNR-FAO-FORTH)
- 15 Mar 2016 - GRSF overall architecture - (CNR-FAO-FORTH)
- 16-03-01 Report of the FIRMS Technical Working Group Meeting (FIRMS-TWG5) - 5th Session. Rome, Italy, 29 February - 4 March 2016 http://www.fao.org/fishery/docs/DOCUMENT/FIGIS_FIRMS/TWG5/FIRMS-TWG5-Report.pdf
- 9 Feb 2016 - Data source: FishSource, further investigations - (FishSource-FAO)
- 1 Dec 2015 - Data source: FishSource - (FishSource-FAO)
- 23 Nov 2015 - Data source: RAM Legacy Stock Assessment Data Base - (RAM-FAO)
- 23 Oct 2015 - Data source: FIRMS - (FIRMS Secretariat)
Governance and Sustainability¶
- Governance and Sustainability
GRSF Value proposition https://docs.google.com/document/d/1tzt09sYaJp_3yv2l2sVsOy-3z5hog2Db1FugaZrM0XI/edit?usp=sharing (VIEW ONLY)
TOC: https://docs.google.com/document/d/11m_kIk0An1A7kLm1P1LlxaTSsgar2MQgQ89VVpM-aRs/edit?usp=sharing (VIEW ONLY)
GRSF - The legal interoperability perspective: https://docs.google.com/document/d/1Oe14G9aHfKQSZnYQKxSOI-SlHjDM0IpPaiacsTDx19c/edit?usp=sharing (VIEW ONLY)
Definitions¶
Resources¶
GRSF Pilot release
- GRSF Catalogue https://i-marine.d4science.org/web/grsf/data-catalogue
- GRSF Map Viewer https://i-marine.d4science.org/web/grsf/map-viewer
Reports
- FIRMS FSC12 Report https://www.fao.org/3/cb8334en/cb8334en.pdf
- FIRMS TWG7 on GRSF https://www.fao.org/fileadmin/user_upload/faoweb/FI_Meetings/FIRMS/FSC12/4e.pdf
- EAB TWG3 - FIRMS TGW6 on GRSF report http://www.fao.org/3/CA1566EN/ca1566en.pdf
- FIRMS FSC10 Report http://www.fao.org/fi/static-media/MeetingDocuments/FIRMS/FIRMS_FSC10/FIRMS_FSC10_Report.pdf
- EAB TWG2 on GRSF report http://www.fao.org/fi/static-media/MeetingDocuments/BlueBRIDGE/EAB-TWG2-GRSF/EAB-TWG2-GRSF_REPORT.pdf
- EAB TWG1 on GRSF report http://www.fao.org/fishery/docs/DOCUMENT/FIGIS_FIRMS/TWG5/FIRMS-TWG5-Report.pdf (See Global Record of Stocks and Fisheries - Agenda Item 7) - See also EAB report at https://goo.gl/ZxD2V6
GRSF documentation
- GRSF records, an overview - overall requirements
- GRSF stock status descriptors
- GRSF Maintenance
- GRSF Validation plan
FORTH - Documentation GRSF Data Catalogue https://wiki.gcube-system.org/index.php?title=GRSF-services
GRSF VRE Plan https://support.d4science.org/projects/bluebridge/wiki/GRSF_VRE_plan
GCube Data Catalogue for GRSF https://wiki.gcube-system.org/gcube/GCube_Data_Catalogue_for_GRSF
Working files
- GRSF Key Concepts & Minimum Data Requirement (Excel file): http://goo.gl/C1y2PX
- GRSF List of Stocks and Fisheries, comparison on pilot cases (Excel file): http://goo.gl/YNa6XE
- GRSF - PPT 1st TCom Jan 2016 http://goo.gl/3gDqTo (iMarine gateway)
- GRSF - PPT Kickoff meeting Sept.2015: http://goo.gl/kvofS5 (iMarine gateway)
Data providers
- Fisheries and Resources Monitoring System (FIRMS) http://firms.fao.org/firms/en
- RAM Legacy Stock Assessment Data Base http://ramlegacy.org/
- FishSource http://www.fishsource.org/ [http://www.fishsource.com/ is an old URL that redirects to .org]
- FishSource APIs https://www.fishsource.org/apipie/
GRSF VREs
- "GRSF Admin":https://i-marine.d4science.org/group/grsf_admin
- "GRSF VRE":https://i-marine.d4science.org/group/grsf/data-catalogue
- GRSF catalogue
- GRSF GeoServer https://grsf-admin.d4science.org/geoserver/web/
Catalogue services
- Catalogue restful service https://wiki.gcube-system.org/gcube/Catalogue_restful_service
- GeoSpatial search for datasets: via API or Search Widget https://wiki.gcube-system.org/gcube/GCube_Resource_Catalogue#GeoSpatial_search_for_datasets:_via_API_or_Search_Widget