Activity

From Nov 18, 2018 to Dec 17, 2018

Dec 17, 2018

07:11 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: This issue has to be analyzed by FORTH. As reported, GRSF misses an information that is key for its users. This infor... Pasquale Pagano
03:00 PM D4Science Infrastructure Incident #13053: DataMiner does not show computations: There seems to be a problem with the folders shared with the old HL. @lucio.lelii@isti.cnr.it please, can you invest... Giancarlo Panichi
01:29 PM D4Science Infrastructure Incident #13053 (Closed): DataMiner does not show computations: The user marco.palma does not retrieve any computation from the DataMiner interface. The check the computations page ... Gianpaolo Coro
02:51 PM D4Science Infrastructure Task #13054 (Closed): Infrastructure-monitor: The new VO D4OS is not shown anymore: The new VO D4OS is missing on every infrastructure-monitor.
Please could you re enable it on Production and PreProdu... Roberto Cirillo
11:40 AM D4Science Infrastructure Incident #13051: Unable to add Generic Resourec to Scope: you are welcome Roberto Cirillo
11:11 AM D4Science Infrastructure Incident #13051: Unable to add Generic Resourec to Scope: Thank you Luca Frosini
11:07 AM D4Science Infrastructure Incident #13051 (Closed): Unable to add Generic Resourec to Scope: Added. The problem was due to the ResourceManager service. Roberto Cirillo
11:01 AM D4Science Infrastructure Incident #13051 (In Progress): Unable to add Generic Resourec to Scope: Roberto Cirillo
09:10 AM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines: > * mysql should only on the backend server
mysql is used by d-net and by the portals; if you prefer a single instal... Anonymous

Dec 15, 2018

10:41 AM D4Science Infrastructure Support #13052 (Closed): Please allow postgres database connection to gcat service: This task was already done. I created a ticket for future references Luca Frosini
10:38 AM D4Science Infrastructure Support #13052 (Closed): Please allow postgres database connection to gcat service: The database is ckan_prod_aginfra which is hosted on ckan-pg-d4s.d4science.org.
The gcat service is hosted on gcat.d... Luca Frosini

Dec 14, 2018

06:38 PM D4Science Infrastructure Incident #13051 (Closed): Unable to add Generic Resourec to Scope: I'm not able to add the resource with id '23d827cd-ba8e-4d8c-9ab4-6303bdb7d1db' to the scope '/d4science.research-inf... Luca Frosini
05:34 PM D4Science Infrastructure Task #13050 (Closed): Try to improve CKAN 2.6.X performance by adding fixes released for CKAN 2.7.X: We know that the CKAN system 2.6.X (currently installed for the gCube Catalogues) degrades its performance after a ce... Francesco Mangiacrapa
05:22 PM ISTI Open Access Feature #11601 (In Progress): Migrate the OpenPortal services to production machines: Michele Artini wrote:
>
> 1. backend.openportal.isti.cnr.it (solr 5.5.x + mongo + mysql)): 4 cpus, 16GB Ram, ~64G... Andrea Dell'Amico
02:36 PM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines: Vm created (and now running):
dnet-openportal.isti.cnr.it (146.48.87.206), alias dnet.openportal.isti.cnr.it
... Tommaso Piccioli
04:41 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Hi all,
The field ***refers_to*** is used to automatically create the field ***Database Source*** and to add the G... Luca Frosini
02:08 PM StocksAndFisheriesKB Bug #13026 (Closed): Approved records loose some information and data: I made an automatic procedure to check the records which fixed the ones with missing information.
Everything should ... Luca Frosini
12:24 PM D4Science Infrastructure Task #13043 (Closed): Provide a cronjob for removing old access.log files on IS-Registry instances: cronjob added to all the Registry instances. Roberto Cirillo
12:10 PM D4Science Infrastructure Task #13043 (In Progress): Provide a cronjob for removing old access.log files on IS-Registry instances: Roberto Cirillo
11:50 AM D4Science Infrastructure Task #13043 (Closed): Provide a cronjob for removing old access.log files on IS-Registry instances: Roberto Cirillo

Dec 13, 2018

05:48 PM D4Science Infrastructure Task #12527: Undeploy FARM/AquaMaps VRE: The Aquamaps VRE has been dismissed and all the related resources cleaned. I'm going to assign this ticket to @lucio.... Roberto Cirillo
04:31 PM D4Science Infrastructure Upgrade #13039 (Completed): Infra-gateways fourth update to gCube 4.13.0: Massimiliano Assante
03:42 PM D4Science Infrastructure Upgrade #13039 (In Progress): Infra-gateways fourth update to gCube 4.13.0: Massimiliano Assante
02:49 PM D4Science Infrastructure Upgrade #13039 (Planned): Infra-gateways fourth update to gCube 4.13.0: Massimiliano Assante
02:47 PM D4Science Infrastructure Upgrade #13039 (Completed): Infra-gateways fourth update to gCube 4.13.0: This update fixes the Incident #13013, it contains the Messages portlet only:
* messages-2.2.0-4.13.1-174717
On... Massimiliano Assante

Dec 12, 2018

05:52 PM D4Science Infrastructure Task #9115 (Closed): VRE Modeler fails to undeploy VREs under gCubeApps: Resources cleaned Roberto Cirillo
05:02 PM D4Science Infrastructure Task #9115 (In Progress): VRE Modeler fails to undeploy VREs under gCubeApps: I'm going to run a script in order to clean all the ServiceEndpoints and GenericResources under gCubeApps. Roberto Cirillo
05:38 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Thanks, sorry but I think there is a misunderstanding, that list is for GRSF records and those groups should be there... Aureliano Gentile
05:26 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: @aureliano.gentile@fao.org about the point 1.
I'm going to remove the legacy groups from GRSF Catalogue (they will b... Francesco Mangiacrapa
05:37 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE: Giancarlo Panichi wrote:
> The problem is that there is no resource on the IS and it is also missing the SecondaryTy... Massimiliano Assante
04:36 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE: The problem is that there is no resource on the IS and it is also missing the SecondaryType:
~~~
<SecondaryTyp... Giancarlo Panichi
04:32 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE: Look this morning I have not republished in RPrototypingLab for sure (and it says .... Simple method that sort words ... Massimiliano Assante
04:18 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE: Looking on svn it seems that SAI and DMPoolManager have correctly published the algorithm on svn, and for what I see ... Giancarlo Panichi
03:24 PM D4Science Infrastructure Incident #13029 (Closed): Private algorithm disappeared in SoBigDataLab VRE: On Monday 10 Dec, I could see my method named SortWords (Python Examples category), also took the screenshot attached... Massimiliano Assante
04:28 PM D4Science Infrastructure Task #12252 (Closed): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: Massimiliano Assante wrote:
> > > There is a confusion here Roberto, look at the VO!, at the time of the ticket (Jun... Roberto Cirillo
04:07 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: > > There is a confusion here Roberto, look at the VO!, at the time of the ticket (June 2017) we moved the 3 VREs abo... Massimiliano Assante
04:01 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: Massimiliano Assante wrote:
> Roberto Cirillo wrote:
> > Roberto Cirillo wrote:
> > > This is the list of all the ... Roberto Cirillo
03:52 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: Roberto Cirillo wrote:
> Roberto Cirillo wrote:
> > This is the list of all the VREs that are present only on infra... Massimiliano Assante
03:45 PM D4Science Infrastructure Task #12252 (Feedback): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: iMarineBoardVRE is back.
Finally, all the VREs have been successfully restored. I'm going to re assign this ticket ... Roberto Cirillo
03:21 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: iLKNAK_Aquaculture restored Roberto Cirillo
02:38 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: SustainableBlueEconomy restored Roberto Cirillo
12:35 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: STRATOS_AQUACULTURES restored Roberto Cirillo
12:13 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: NHREUS_Aquaculture restored Roberto Cirillo
11:21 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: MARKELLOS_Aquaculture is back Roberto Cirillo
04:00 PM StocksAndFisheriesKB Bug #13026: Approved records loose some information and data: We will fix the issue asap. @luca.frosini@isti.cnr.it is working to fix it Francesco Mangiacrapa
12:37 PM StocksAndFisheriesKB Bug #13026 (In Progress): Approved records loose some information and data: The data published in the two VREs are exactly the same. You will see that Catches for example are included (under St... Yannis Marketakis
10:33 AM StocksAndFisheriesKB Bug #13026 (Closed): Approved records loose some information and data: In example
Sebastes mentella East Greenland (Subarea 27.14) Iceland Grounds (Division 27.5.a)
by comparing the r... Aureliano Gentile
10:11 AM D4Science Infrastructure Task #11522 (Closed): Provide a cronjob for removing old access.log files: The job works properly Roberto Cirillo

Dec 11, 2018

06:01 PM D4Science Infrastructure Incident #13007 (Closed): The maven disk is full and a first try to cleanup the space failed: The scheduled activity "empty basket" has released ~200 GB of disk.
It will run every day and likely it will take mu... Tommaso Piccioli
05:05 PM D4Science Infrastructure Task #11522 (Feedback): Provide a cronjob for removing old access.log files: Roberto Cirillo
05:04 PM D4Science Infrastructure Task #11522 (In Progress): Provide a cronjob for removing old access.log files: Roberto Cirillo
04:48 PM D4Science Infrastructure Task #11522 (Closed): Provide a cronjob for removing old access.log files: Added also on root-vo collector. I'm going to set to feedback this ticket in order to check tomorrow if the job works... Roberto Cirillo
03:58 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: Added to the following hosts:
collector-d4os.d4science.org
collector-parthenosvo.d4science.org
collector-opena... Roberto Cirillo
03:46 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: Added to:
~~~
collector-d4research.d4science.org
node24.p.d4science.research-infrastructures.eu
collector-sbd.d... Roberto Cirillo
12:54 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: The cronjob have been properly installed on collector-pre. I'm going to install it on the other hosts.
Roberto Cirillo
12:32 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: Ok. I'm going to run it, in order to test it, in preproduction environment, on collector-pre.d4science.org host. Roberto Cirillo
03:49 PM D4Science Infrastructure Task #12599 (Closed): Is it possible to install rJava on RStudioLab?: Andrea Dell'Amico
11:36 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: GRSF restored and GRSF_Admin was already present Roberto Cirillo
10:55 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: Roberto Cirillo wrote:
> This is the list of all the VREs that are present only on infrastructure-monitor and that s... Roberto Cirillo
10:50 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: GALAXIDI VRE restored Roberto Cirillo

Dec 10, 2018

07:23 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: See https://support.d4science.org/projects/aginfraplut/wiki/GCore_based_services for the documentation on how to conf... Andrea Dell'Amico
10:33 AM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files: Again the same problem on collector-d4research and collector-openaire. This time I'm not going to remove the logs man... Roberto Cirillo
07:15 PM D4Science Infrastructure Task #12384 (Feedback): Provide a cronjob for restarting VREModeler service: The wiki entry is here: https://support.d4science.org/projects/aginfraplut/wiki/GCore_based_services . I also added a... Andrea Dell'Amico
07:04 PM D4Science Infrastructure Task #12384 (In Progress): Provide a cronjob for restarting VREModeler service: Andrea Dell'Amico
06:17 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: ForkysVRE restored Roberto Cirillo
05:08 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: EllinikaPsariaVRE restored. Roberto Cirillo
04:42 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: EMPHASIS VRE restored. Roberto Cirillo
03:51 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: D4STeam has been restored Roberto Cirillo
03:33 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: CollabResearch is back Roberto Cirillo
12:47 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: CWP_Secretariat is back Roberto Cirillo
12:29 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: CFE_DATA restored Roberto Cirillo
12:04 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: Aquamaps removed (it was still present on infra monitor) and Aquabiotech restored. Roberto Cirillo
11:15 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: AlieiaVRE is back. Roberto Cirillo
04:58 PM D4Science Infrastructure Incident #13013 (Closed): Upgrade the Messsages Portlet to gCube 4.13: The fix will be released with gCube 4.13.1 Francesco Mangiacrapa
04:38 PM D4Science Infrastructure Incident #13013: Upgrade the Messsages Portlet to gCube 4.13: Your analysts is correct can you release the fix on 4.13.1? Thank you Massimiliano Assante
03:32 PM D4Science Infrastructure Incident #13013 (Closed): Upgrade the Messsages Portlet to gCube 4.13: The Messages Portlet is not updated to gCube 4.13. We need to upgrade it.
The last build is available at http://et... Francesco Mangiacrapa
01:20 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: Andrea Dell'Amico wrote:
> The plugin is installed everywhere.
Great! Thanks a lot! Lars Valentin
01:18 PM D4Science Infrastructure Incident #12894 (Closed): Update of FSK plugin failed: The plugin is installed everywhere.
Andrea Dell'Amico
01:08 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: The installation of the plugin is ongoing. Andrea Dell'Amico
12:34 PM D4Science Infrastructure Incident #12894 (In Progress): Update of FSK plugin failed: Lars Valentin wrote:
> Hey Andrea,
>
> could you please point me to the parts where you check if any KNIME proces... Andrea Dell'Amico
12:17 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: Hey Andrea,
could you please point me to the parts where you check if any KNIME process is running, before removin... Lars Valentin
12:15 PM D4Science Infrastructure Incident #12894 (Feedback): Update of FSK plugin failed: I changed the playbook and the cron job configuration. The plugin installation still fails:
~~~
eclipse.buildId=u... Andrea Dell'Amico
12:11 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: 1: indeed if no legacy records are published it make sense get rid of that group (but to be kept in the GRSF Admin VR... Aureliano Gentile
11:43 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Yannis Marketakis wrote:
> The publishing of the records was completed a couple of hours after updating the ticket. ... Francesco Mangiacrapa
08:24 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: The publishing of the records was completed a couple of hours after updating the ticket.
However, I still see that ... Yannis Marketakis

Dec 09, 2018

01:28 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: Thank you Andrea,
since we have combined our repositories, `https://dl.bintray.com/silebat/fsklab_icpmf`
does in... Lars Valentin
12:36 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: Here is the ansible knime role, anyway. I've not reworked it to supporto multiple knime versions yet.
Andrea Dell'Amico
12:31 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: The daily update is performed by a cron job that runs a shell script:
~~~
#!/bin/bash
RETVAL=
RETVAL_WF=
DATE=... Andrea Dell'Amico
10:26 AM D4Science Infrastructure Incident #12894: Update of FSK plugin failed: Hi Andrea,
The problem was in the update site of FSK_Lab which cause problems in the cache of P2 repository of KNIME... ahmad swaid
01:23 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed: Yes, the deleted items was in the trash.
I scheduled a "empty trash" activity, on a daily schedule it will check a... Tommaso Piccioli
12:38 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed: Agree. At this point we should wait for the upgrade to a newer release. We'll try to work it out ASAP. Andrea Dell'Amico

Dec 07, 2018

09:40 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: thanks, no one was imaging the need to purge the grsf vre again, or at least nobody warned me. Anyway thanks a lot an... Aureliano Gentile
04:03 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Thanks Luca.
I am re-publishing right away Yannis Marketakis
03:21 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: We cleaned the catalogue.
@marketak@ics.forth.gr can you republish the records? Thanks a lot Luca Frosini
12:46 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: This task is critical since Aureliano already sent the invitation to the GRSF colleagues for reviewing the content of... Pasquale Pagano
09:01 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: As soon as there's no other way we will republish them Yannis Marketakis
06:31 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed: I think the "empty trash" scheduled task should be added to our nexus. Roberto Cirillo
04:26 PM D4Science Infrastructure Incident #13007 (In Progress): The maven disk is full and a first try to cleanup the space failed: The file system check did not have any effect. There are ~20GB of free space right now, if I find a way to expand the... Andrea Dell'Amico
03:47 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed: We brought down the server and I'm running a file system check on the maven data disk, it will take some time.
Andrea Dell'Amico
03:46 PM D4Science Infrastructure Incident #13007 (Closed): The maven disk is full and a first try to cleanup the space failed: @tommaso.piccioli@isti.cnr.it followed the procedure described here: https://support.sonatype.com/hc/en-us/articles... Andrea Dell'Amico
06:25 PM D4Science Infrastructure Upgrade #13010 (Completed): Infra-gateways third update to gCube 4.13.0: Massimiliano Assante
06:05 PM D4Science Infrastructure Upgrade #13010 (In Progress): Infra-gateways third update to gCube 4.13.0: Massimiliano Assante
05:54 PM D4Science Infrastructure Upgrade #13010 (Completed): Infra-gateways third update to gCube 4.13.0: This update features improvements and bug fixes on:
* statistical-algorithms-importer-1.13.1-4.13.0-174674
* wor... Massimiliano Assante
05:40 PM D4Science Infrastructure VM Creation #12989 (Closed): Please create a VM for new gCat Service: I just added the nagios check too. Andrea Dell'Amico
05:17 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: Do I have to close the ticket, or do you want to leave it as is until you add the Nagios Check? Luca Frosini
05:16 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: It seems working now. Thanks a lot Luca Frosini
05:15 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: Luca Frosini wrote:
> @andrea.dellamico@isti.cnr.it I forget to ask to allow gcat.d4science.org host to be able to c... Andrea Dell'Amico
05:08 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: The nagios check can only run GET or POST checks, at least the version that we run right now.
Andrea Dell'Amico
04:58 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: Also
~~~
OPTIONS https://gcat.d4science.org/gcat/profiles
~~~
which should be faster Luca Frosini
04:57 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: You can use this REST API for Nagis Check:
~~~
GET/HEAD https://gcat.d4science.org/gcat/profiles
~~~ Luca Frosini
04:49 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: @andrea.dellamico@isti.cnr.it I forget to ask to allow gcat.d4science.org host to be able to connect to the postgres ... Luca Frosini
03:59 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: I'm going to test it. Thank you Luca Frosini
03:43 PM D4Science Infrastructure VM Creation #12989 (Feedback): Please create a VM for new gCat Service: The service is up. Andrea Dell'Amico
05:01 PM StocksAndFisheriesKB Bug #13008 (Closed): GRSF Item URLs are not working properly: The Item URLs published for the GRSF Items (at https://bluebridge.d4science.org/group/grsf/data-catalogue?path=/datas... Francesco Mangiacrapa
04:27 PM D4Science Infrastructure Incident #13002 (Closed): Files corrupted on the WS: I have replaced the storageId with the correct one, It works now Lucio Lelii
04:15 PM D4Science Infrastructure Incident #13002: Files corrupted on the WS: The remotepath is present on MongoDB but the related id is the following: 5b1a6f7c02cadc2f6a3e0ad4 Roberto Cirillo
03:29 PM D4Science Infrastructure Incident #13002 (In Progress): Files corrupted on the WS: The id is not present in the Storage
Roberto can you check in Mongo DB ? :
~~~
data "/Home/gianpaolo.coro/Wor... Lucio Lelii
03:21 PM D4Science Infrastructure Incident #13002: Files corrupted on the WS: the link you pasted return a strange error not related to storagehub : javax.servlet.ServletException: Error retrievi... Lucio Lelii
11:10 AM D4Science Infrastructure Incident #13002 (Closed): Files corrupted on the WS: Some files cannot be downloaded through the DM portlet
Workspace / Datasets / Multi-Image 3D Reconstruction Test C... Gianpaolo Coro
03:44 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: ARDAG_Aquaculture is back Roberto Cirillo
11:40 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: > Pleasecould you check if all these VREs should be restored on VREManager? Maybe there are some VREs that have be... Massimiliano Assante
11:36 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: This is the list of all the VREs that are present only on infrastructure-monitor and that should be restored on VREMa... Roberto Cirillo
11:13 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: >
> Now I'm going to restore the VREs under FARM VO. what expiration date do you suggest?
Thanks, i suggest an e... Massimiliano Assante
11:09 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: preVRE and Dorne VRE have been fixed properly.
Dorne was not present on ResourceManager internal state instead pre... Roberto Cirillo
10:02 AM D4Science Infrastructure Task #12252 (In Progress): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28: First, I'm going to fix the following VREs in preprod environment:
* preVRE
* Dorne Roberto Cirillo

Dec 06, 2018

06:49 PM D4Science Infrastructure VM Creation #12989 (In Progress): Please create a VM for new gCat Service: gcat.d4science.org running, to be provisioned. Tommaso Piccioli
10:28 AM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: Andrea Dell'Amico wrote:
> Please add the vault file with the token into `ansible-playbooks/d4science-ghn-cluster/gr... Luca Frosini
06:31 PM StocksAndFisheriesKB Task #12861 (In Progress): Purge old records of the public GRSF Catalogue: @marketak@ics.forth.gr, @aureliano.gentile@fao.org
I just copied via script to the GRSF Catalogue (see at https:/... Francesco Mangiacrapa
11:16 AM StocksAndFisheriesKB Task #12861 (Closed): Purge old records of the public GRSF Catalogue: I created the ticket #12994 for the Group issue Luca Frosini
05:07 PM D4Science Infrastructure Task #12990 (Closed): Thredds: the threddsServlet*.log files are never removed.: Done on all the instances. The log files are now located into `/home/gcube/tomcat/logs/thredds/`
Andrea Dell'Amico
04:41 PM D4Science Infrastructure Task #12990 (In Progress): Thredds: the threddsServlet*.log files are never removed.: Andrea Dell'Amico
04:10 PM StocksAndFisheriesKB Bug #12994 (Rejected): Group are not created in GRSF VRE: The GRSF service automatically associates a group to a record using some defined fields. If the group does not exist ... Luca Frosini
12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE: ~~~
2018-12-03 10:01:16,677 [Thread-63126] ERROR DataCatalogueImpl: Unable to check if this role was already set, pl... Luca Frosini
12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE: @francesco.mangiacrapa@isti.cnr.it can you please check it? Luca Frosini
12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE: It seems an issue related to privileges of grsf.publisher with such catalogue:
~~~
2018-12-03 10:01:16,677 [Threa... Luca Frosini
11:15 AM StocksAndFisheriesKB Bug #12994 (Rejected): Group are not created in GRSF VRE: Luca Frosini
03:28 PM D4Science Infrastructure Task #12927 (Closed): Thredds WMS AquaMaps configuration: The templates now reflect the manual changes of the thredds config files.
The mixed content problems cannot be solv... Andrea Dell'Amico
10:35 AM D4Science Infrastructure VM Creation #11771 (Closed): Please create a VM having access to prod authorization service: Luca Frosini

Dec 05, 2018

07:18 PM D4Science Infrastructure Task #12990: Thredds: the threddsServlet*.log files are never removed.: thredds uses log4j, the configuration is `WEB-INF/classes/log4j2.xml` and the `threddsServlet` part misses a `Default... Andrea Dell'Amico
07:17 PM D4Science Infrastructure Task #12990 (Closed): Thredds: the threddsServlet*.log files are never removed.: Also, it puts the logs into the data directory. Better move them into the tomcat logs one.
Andrea Dell'Amico
07:05 PM D4Science Infrastructure Task #12927 (Feedback): Thredds WMS AquaMaps configuration: The changes have been applied.
Andrea Dell'Amico
04:41 PM D4Science Infrastructure Task #12927 (In Progress): Thredds WMS AquaMaps configuration: Andrea Dell'Amico
06:59 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: Please add the vault file with the token into `ansible-playbooks/d4science-ghn-cluster/group_vars/gcat_prod/vault-fil... Andrea Dell'Amico
05:54 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: I have fixed the playbook of gcat service as suggested by @andrea.dellamico@isti.cnr.it Luca Frosini
03:28 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service: I already created the skeleton playbook for gcat service. Luca Frosini
03:17 PM D4Science Infrastructure VM Creation #12989 (Closed): Please create a VM for new gCat Service: gCat is the new gCube Catalogue Service (it will replace the old catalogue-ws).
For a certain period, we will have... Luca Frosini
04:52 PM StocksAndFisheriesKB Task #12974 (Closed): Update intro text in the GRSF VRE: Francesco Mangiacrapa
04:49 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE: More than perfect, thanks!
We are now about to inform the GRSF team colleagues to start the review of the pilot rele... Aureliano Gentile
04:44 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE: Aureliano Gentile wrote:
> Thanks a lot, please see a couple of text modifications in the attached screenshot, if po... Francesco Mangiacrapa
04:04 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE: Thanks a lot, please see a couple of text modifications in the attached screenshot, if possible. Aureliano Gentile
10:30 AM StocksAndFisheriesKB Task #12974 (Feedback): Update intro text in the GRSF VRE: Done. @aureliano.gentile@fao.org, you can check it at https://i-marine.d4science.org/group/grsf/data-catalogue
I hav... Francesco Mangiacrapa
10:14 AM StocksAndFisheriesKB Task #12974 (In Progress): Update intro text in the GRSF VRE: Francesco Mangiacrapa
04:23 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: I was using an incomplete command. The right one is:
~~~
./run.sh smartexecutor-services.yml -i inventory/hosts.p... Luca Frosini
03:22 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: Nope, the cause must be different. The nagios-related tasks have a `ignore_errors: True` entry.
Andrea Dell'Amico
03:19 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: The playbook fail for me because I have no root access on "monitoring.research-infrastructures.eu".
It fails when th... Luca Frosini
03:14 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: The correct playbook for the smart excutors is `smartexecutor-services.yml`. They were split some months ago, because... Andrea Dell'Amico
12:48 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: I fixed the playbook and tried to launch the playbook which stop after few steps.
~~~
./run.sh smartgears-node.ym... Luca Frosini
10:48 AM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: The error was related to duplicated and missing dependencies causing exceptions (the error was related to wrong scope... Luca Frosini
01:18 PM D4Science Infrastructure Task #12964: logback does not change its configuration at runtime: I tested a log level change on accounting-harvester.d4science.org and it worked.
Thanks a lot Luca Frosini
10:50 AM D4Science Infrastructure Incident #12978: Scoial Networking provide a '500 Internal Server Error' status code in certain contexts: @massimiliano.assante@isti.cnr.it please relate the ticket Luca Frosini
10:50 AM D4Science Infrastructure Incident #12978: Scoial Networking provide a '500 Internal Server Error' status code in certain contexts: So you have to fix the resources on IS Luca Frosini
09:54 AM D4Science Infrastructure Incident #12978 (Rejected): Scoial Networking provide a '500 Internal Server Error' status code in certain contexts: The listed VRE scopes belong to undeployed VREs, these no longer existing on the gateway but it could be that the sco... Massimiliano Assante
09:26 AM D4Science Infrastructure Incident #12978 (Rejected): Scoial Networking provide a '500 Internal Server Error' status code in certain contexts: The invoked REST API is:
~~~
http://socialnetworking1.d4science.org:80/social-networking-library-ws/rest/2/users/... Luca Frosini
10:05 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Yannis Marketakis wrote:
> @francesco.mangiacrapa@isti.cnr.it the records published in GRSF VRE are replicas of GRSF... Francesco Mangiacrapa
08:00 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: @francesco.mangiacrapa@isti.cnr.it the records published in GRSF VRE are replicas of GRSF records found in GRSF Admin... Yannis Marketakis

Dec 04, 2018

06:38 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: Yes please. Andrea Dell'Amico
05:37 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: I checked the machine and the plugin is not working properly. I'm investigating the issue.
Apart from the issue, I j... Luca Frosini
06:33 PM D4Science Infrastructure Task #12599 (Feedback): Is it possible to install rJava on RStudioLab?: Now it's working for me on all the instances I have access to. Any feedback?
Andrea Dell'Amico
05:38 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: Yannis Marketakis wrote:
> @aureliano.gentile@fao.org grouping is a facility offered by the catalogue. Such informat... Francesco Mangiacrapa
05:06 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: thanks, @francesco.mangiacrapa@isti.cnr.it you have your answer from FORTH. Aureliano Gentile
03:52 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: @aureliano.gentile@fao.org grouping is a facility offered by the catalogue. Such information is not stored in the GRS... Yannis Marketakis
12:59 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue: As per interaction with @francesco.mangiacrapa@isti.cnr.it I would need assistance from:
@marketak@ics.forth.gr fo... Aureliano Gentile
03:10 PM D4Science Infrastructure Task #12968 (Rejected): Add the javaIO plugin for Tiff if is missing: We need a different solution. Andrea Dell'Amico
02:26 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing: Also, read the latest comments: https://bugs.java.com/bugdatabase/view_bug.do?bug_id=8156745 : not only it's unsuppor... Andrea Dell'Amico
12:44 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing: The place should be this one: https://www.oracle.com/technetwork/java/install-jai-imageio-1-0-01-139659.html but ther... Andrea Dell'Amico
12:40 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing: That library is so old that I don't find a way to download it...
Andrea Dell'Amico
10:12 AM D4Science Infrastructure Task #12968 (Rejected): Add the javaIO plugin for Tiff if is missing: About this Incident #12787
I released in production a Workspace utility to create the thumbnail (on the fly) of an... Francesco Mangiacrapa
02:58 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: Yes Emmanuel, we already planned to solve this type of issues on one of next releases Lucio Lelii
02:55 PM D4Science Infrastructure Incident #12965 (Closed): Error creating shared folder in workspace: Thanks Lucio, I confirm it works now. Maybe it would be good to add some rules to prevent user from using these speci... Emmanuel Blondel
12:16 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: Hi Emmanuel can you try now to share your folder ? I had to rename your folder replacing the "long dash" (that is not... Lucio Lelii
12:40 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE: The URL of the page is the following https://i-marine.d4science.org/group/grsf/data-catalogue Aureliano Gentile
12:16 PM StocksAndFisheriesKB Task #12974 (Closed): Update intro text in the GRSF VRE: Following the bulk approval of GRSF records (pilot release), please update the introductory text as follows. Once don... Aureliano Gentile

Dec 03, 2018

06:01 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: The path in my workspace is:
/Workspace/FAO Missions/TT 4 – 7th June 2018 Chaguanas - Trinidad – R Training course
... Emmanuel Blondel
03:03 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: Hi Emmanuel, I tried the same thing and it worked, can you please tell me the absolute path of the folder? Lucio Lelii
12:26 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: i'm the owner of the folder Emmanuel Blondel
12:24 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: https://services.d4science.org/group/d4science-services-gateway/workspace Emmanuel Blondel
12:04 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace: Hi @emmanuel.blondel1@gmail.com, we need a bit of context.
Which gateway are you using?
Is the folder a subfolder... Pasquale Pagano
11:36 AM D4Science Infrastructure Incident #12965 (Closed): Error creating shared folder in workspace: I've tried to share a workspace folder with colleagues (Y. Laurent, M. Taconet), and I get an error (see attached scr... Emmanuel Blondel
04:41 PM StocksAndFisheriesKB Task #12861 (In Progress): Purge old records of the public GRSF Catalogue: New records have been published in the GRSF VRE, the entry page is not showing "Browse by Organisations" and "Browse ... Aureliano Gentile
02:36 PM StocksAndFisheriesKB Task #12858 (Closed): Purge old records from public GRSF VRE: Yannis Marketakis
02:35 PM StocksAndFisheriesKB Task #12857 (Closed): Bulk approval of (valid) GRSF records: We have already approved and published the records in the public GRSF VRE.
You can see the results in https://servic... Yannis Marketakis
01:03 PM StocksAndFisheriesKB Task #12857: Bulk approval of (valid) GRSF records: Dear FORTH colleagues, do you envisage a new data harvest before approving? At least from FIRMS where in the meantime... Aureliano Gentile
02:16 PM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines: I think that 3 machines are necessary for the production deployment:
1. dnet.openportal.isti.cnr.it (java 8 + tomc... Michele Artini
12:32 PM D4Science Infrastructure Incident #12922 (Closed): Workspace get link not working: Francesco Mangiacrapa
12:32 PM D4Science Infrastructure Incident #12923 (Closed): Workspace public folders are shown as regular shared folders: Francesco Mangiacrapa
09:19 AM D4Science Infrastructure Task #12964: logback does not change its configuration at runtime: It sounds really good. Luca Frosini

Nov 30, 2018

09:28 PM D4Science Infrastructure Task #12964 (Closed): logback does not change its configuration at runtime: I added `scanPeriod="60 seconds"` to the logback template in the smartgears playbook.
The change must be provisione... Andrea Dell'Amico
09:25 PM D4Science Infrastructure Task #12964 (In Progress): logback does not change its configuration at runtime: It's a bug, introduced in version 1.1.7 and fixed in 1.1.13. The bug tracking is here: https://jira.qos.ch/browse/LOG... Andrea Dell'Amico
09:22 PM D4Science Infrastructure Task #12964 (Closed): logback does not change its configuration at runtime: It should reload its configuration ad fixed intervals, but it does not.
Andrea Dell'Amico
09:05 PM D4Science Infrastructure VM Creation #11771 (Feedback): Please create a VM having access to prod authorization service: The service has been deployed. I see no errors in the tomcat logs, can you check if it's working?
Andrea Dell'Amico
08:55 PM D4Science Infrastructure Task #12963 (Closed): Routinely restart the ldap service on the replicas: Cron job installed. Andrea Dell'Amico
08:50 PM D4Science Infrastructure Task #12963 (In Progress): Routinely restart the ldap service on the replicas: I'm adding the task that install a cron job to restart the service, at a different hour on the replicas with respect ... Andrea Dell'Amico
06:52 PM D4Science Infrastructure Task #12963 (Closed): Routinely restart the ldap service on the replicas: After some days of uptime, the nagios check starts failing even if the service seems to respond to the local client... Andrea Dell'Amico
06:43 PM D4Science Infrastructure Task #12827 (Closed): Configure CKAN to store .cache files (that are session info) in memory: All the servers have been reconfigured. Andrea Dell'Amico
01:12 PM StocksAndFisheriesKB Task #12857 (In Progress): Bulk approval of (valid) GRSF records: Yannis Marketakis

Nov 29, 2018

06:38 PM D4Science Infrastructure VM Creation #11771 (In Progress): Please create a VM having access to prod authorization service: Hostname and Ip address are going to be accounting-harvester.d4science.org 146.48.122.7. Andrea Dell'Amico
04:09 PM D4Science Infrastructure Task #12949 (Closed): Provide a cronjob for avoiding ldap problem on rstudio instances: Cron job installed on the production rstudio servers. It runs once a minute.
Andrea Dell'Amico
01:22 PM D4Science Infrastructure Task #11162 (Closed): both d4science portal cluster nodes accessibile directly via http: Andrea Dell'Amico
01:21 PM D4Science Infrastructure Task #6232 (Closed): Enable Infrastructure Gateway cluster communication behind firewall: Done. Andrea Dell'Amico
12:51 PM D4Science Infrastructure Incident #12956 (Rejected): Workspace move operation, workspace explorer lists folders as empty while browsing: This behaviour is not an incident. During moving operation the Workspace Explorer widget shows only folders (not file... Francesco Mangiacrapa
12:24 PM D4Science Infrastructure Incident #12956: Workspace move operation, workspace explorer lists folders as empty while browsing: Similar error on RAKIP_portal:
~~~
2018-11-29 06:16:36,108 INFO o.g.p.w.w.s.WorkspaceExplorerServiceImpl [ajp-... Giancarlo Panichi
10:12 AM D4Science Infrastructure Incident #12956 (Rejected): Workspace move operation, workspace explorer lists folders as empty while browsing: When performing a move and browsing using the workspace explorer it sometimes says the folder is empty (but its not).... Massimiliano Assante
12:31 PM D4Science Infrastructure VRE #12959 (Available): EOSC Pilot VisualMedia VRE: Massimiliano Assante
11:20 AM D4Science Infrastructure VRE #12959 (Released): EOSC Pilot VisualMedia VRE: The EOSC VisualMedia VRE will be accessible via the D4Science Gateway (https://services.d4science.org/explore) under ... Massimiliano Assante
09:26 AM StocksAndFisheriesKB Bug #12906 (Closed): Update "problematic" records in the GRSF admin catalog: The following records have been updated:
* 701 legacy Stock records (from FIRMS)
* 2928 GRSF Stock records Yannis Marketakis
07:39 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: @pasquale.pagano@isti.cnr.it
Thanks a lot for the detailed explanation!
In the past I always understood that t... Lars Valentin

Nov 28, 2018

03:39 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: Yes, please Luca Frosini
01:23 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service: Can we start the activity now?
Andrea Dell'Amico
02:15 PM D4Science Infrastructure Support #12950 (Closed): Issue with access in SDI_lab VRE RStudio: Roberto Cirillo
12:43 PM D4Science Infrastructure Support #12950 (Resolved): Issue with access in SDI_lab VRE RStudio: Thanks, user can access his Rstudio now. Emmanuel Blondel
10:14 AM D4Science Infrastructure Support #12950 (Feedback): Issue with access in SDI_lab VRE RStudio: Please could you retry now? I've reset @mathias.rouan@univ-brest.fr local state. Roberto Cirillo
10:04 AM D4Science Infrastructure Support #12950 (In Progress): Issue with access in SDI_lab VRE RStudio: Roberto Cirillo
01:18 PM D4Science Infrastructure Support #12636 (Closed): Redmine: preventing email addresses to be shown in public projects: Andrea Dell'Amico
01:18 PM D4Science Infrastructure Task #12387 (Closed): Increment the prometheus data retention, right now it's too limited.: I just incremented it to one year, I guess we are going to need more disk space in the near future.
Andrea Dell'Amico
01:14 PM D4Science Infrastructure Support #12864 (Closed): Nagios down: Andrea Dell'Amico

Nov 27, 2018

10:25 PM D4Science Infrastructure Support #12950 (Closed): Issue with access in SDI_lab VRE RStudio: Hello, I'm writing this ticket on behalf of a SDI_Lab VRE user @mathias.rouan@univ-brest.fr in, who is facing issue w... Emmanuel Blondel
05:23 PM D4Science Infrastructure Task #6232: Enable Infrastructure Gateway cluster communication behind firewall: I'm working on this one again. To accomodate the needs of the liferay cluster communications I had to rewrite some pa... Andrea Dell'Amico
04:41 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: I will add a bit of technical information since I believe it is not yet clear.
D4Science operated by CNR supports... Pasquale Pagano
02:38 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure: No need to continue keeping this ticket open, there was a misunderstanding and that's all. Leonardo Candela
01:12 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Lars Valentin wrote:
> Why do you say I am fighting? I was kindly asking why we have this gap in what CNR said befor... Panagiotis Zervas
01:07 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Why do you say I am fighting? I was kindly asking why we have this gap in what CNR said before and does say now.
A... Lars Valentin
12:57 PM D4Science Infrastructure Task #12806 (Feedback): Testing the new settings of the RAKIP infrastructure: Hey @lars.valentin@bfr.bund.de
yes there is a big misunderstanding here (and not only here I would say). The over... Leonardo Candela
12:46 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: I add examples of what CNR said in the past:
https://support.d4science.org/issues/12614#note-5
https://suppo... Lars Valentin
12:42 PM D4Science Infrastructure Task #12806 (In Progress): Testing the new settings of the RAKIP infrastructure: Leonardo Candela wrote:
> @lars.valentin@bfr.bund.de thanks for the explanation. What was puzzling me was the commen... Lars Valentin
12:28 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure: Leonardo Candela
12:28 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: @lars.valentin@bfr.bund.de thanks for the explanation. What was puzzling me was the comment "multicore use does **now... Leonardo Candela
04:40 PM D4Science Infrastructure Task #12949 (Closed): Provide a cronjob for avoiding ldap problem on rstudio instances: Sometimes we have ldap problems on rstudio instances maybe due to a ldap timeout.
It's needed to provide a cronjob i... Roberto Cirillo
03:59 PM D4Science Infrastructure Incident #12944 (Closed): Error Connecting on rstudio2.d4science.org: Roberto Cirillo
03:10 PM D4Science Infrastructure Incident #12944 (In Progress): Error Connecting on rstudio2.d4science.org: I've tried to reset your user's state but nothing change. I see a strange error on system logs, I'm going to investig... Roberto Cirillo
12:48 PM D4Science Infrastructure Incident #12944: Error Connecting on rstudio2.d4science.org: AnalyticsLab Massimiliano Assante
12:15 PM D4Science Infrastructure Incident #12944 (Feedback): Error Connecting on rstudio2.d4science.org: Roberto Cirillo
12:11 PM D4Science Infrastructure Incident #12944 (In Progress): Error Connecting on rstudio2.d4science.org: Please could you provide the VRE you are using? Roberto Cirillo
11:53 AM D4Science Infrastructure Incident #12944 (Closed): Error Connecting on rstudio2.d4science.org: When connecting on https://rstudio2.d4science.org/r-connector/gcube/service/connect?gcube-token=0deee49b-****** i get... Massimiliano Assante
02:58 PM D4Science Infrastructure VRE #12946 (In Progress): D4Research/FAIR_DM VRE Removal: Massimiliano Assante
02:58 PM D4Science Infrastructure VRE #12946 (Removed): D4Research/FAIR_DM VRE Removal: Massimiliano Assante
02:36 PM D4Science Infrastructure VRE #12913 (Removed): gCubeApps/ICOS_ETC VRE Removal: The VRE has been disposed successfully. Massimiliano Assante
02:32 PM D4Science Infrastructure VRE #12913: gCubeApps/ICOS_ETC VRE Removal: The undeployment has been triggered Massimiliano Assante
02:29 PM D4Science Infrastructure VRE #12913 (In Progress): gCubeApps/ICOS_ETC VRE Removal: Massimiliano Assante
02:28 PM D4Science Infrastructure VRE #12913 (Planned): gCubeApps/ICOS_ETC VRE Removal: Massimiliano Assante
02:27 PM D4Science Infrastructure VRE #12848 (Removed): D4Research/BOBLME_HilsaAWG Removal: Massimiliano Assante
02:27 PM D4Science Infrastructure VRE #12848 (In Progress): D4Research/BOBLME_HilsaAWG Removal: Massimiliano Assante
12:30 PM D4Science Infrastructure Task #12614 (Closed): Need server with joblength 1 to use all 16 cores and a cue system per server.: I'm going to close the ticket. According to #12806 the RAKIP VRE cluster is supporting the expected case. Leonardo Candela

Nov 26, 2018

06:01 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory: @francesco.mangiacrapa@isti.cnr.it will decide when reconfigure the remaining CKAN instances. Andrea Dell'Amico
05:26 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory: Reconfiguration of the sobigdata ckan servers is ongoing. It will take some time, because the old sessions data is be... Andrea Dell'Amico
01:01 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: "Sharks - Global" (http://data.d4science.org/ctlg/GRSF_Admin/41cdffcb-fff2-3aaa-ab38-1d23a2b651c4) is marine resource... Aureliano Gentile
12:19 PM StocksAndFisheriesKB Bug #12906 (In Progress): Update "problematic" records in the GRSF admin catalog: I would prefer an automatic way of identifying them (so that we are sure that future updates are consistent). I under... Yannis Marketakis
10:37 AM D4Science Infrastructure Upgrade #12936 (Completed): Infra-gateways second update to gCube 4.13.0: Massimiliano Assante
10:07 AM D4Science Infrastructure Upgrade #12936 (In Progress): Infra-gateways second update to gCube 4.13.0: Massimiliano Assante
10:07 AM D4Science Infrastructure Upgrade #12936 (Completed): Infra-gateways second update to gCube 4.13.0: This update features improvements and bug fixes on:
* Workspace portlet (26 Nov 2018)
* PerformFISH KPI Applicat... Massimiliano Assante
10:03 AM D4Science Infrastructure Task #6309 (Closed): D4Science Infrastructure migration to Java 8: Massimiliano Assante
10:03 AM D4Science Infrastructure Task #6309 (In Progress): D4Science Infrastructure migration to Java 8: the ticket is old and will be closed. the migration was performed since a while ... Massimiliano Assante
10:02 AM D4Science Infrastructure Task #6312 (Closed): Java 8 unexpected behaviours should be communicated by the gCube VRE Social Facility: Massimiliano Assante

Nov 23, 2018

10:09 PM D4Science Infrastructure Task #12806 (Feedback): Testing the new settings of the RAKIP infrastructure: Hi Leonardo,
as a developer of services, I have to prove that the outcame of my work is behaving as expected. Ther... Lars Valentin
04:03 PM D4Science Infrastructure Task #12806 (In Progress): Testing the new settings of the RAKIP infrastructure: Lars Valentin wrote:
> Hi @g.panichi@isti.cnr.it ,
>
> thanks a lot for helping me. Looks like the multicore use ... Leonardo Candela
03:29 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure: Hi @g.panichi@isti.cnr.it ,
thanks a lot for helping me. Looks like the multicore use does now behave as expected ... Lars Valentin
03:18 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Sorry @lars.valentin@bfr.bund.de , I had not noticed the amount of files produced.
Well, then the execution of your ... Giancarlo Panichi
03:08 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Hi @lars.valentin@bfr.bund.de , I tried your algorithm Dm15coresuse with the default parameter, and is actually using... Giancarlo Panichi
03:00 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Hi @g.panichi@isti.cnr.it
looks like my previous message got lost while uploading.
Thank you for taking over! ... Lars Valentin
02:18 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Hi @lars.valentin@bfr.bund.de , please could you give me the Equivalent Get Request that is given by the DataMiner wh... Giancarlo Panichi
11:48 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: I'm passing this activity to @g.panichi@isti.cnr.it, he knows dataminer much better than me. Andrea Dell'Amico
07:15 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: > They work properly, and they are related to the servers you are using.
>
> I cannot spend time staring at a bu... Lars Valentin
05:29 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: I updated the list of FIRMS, please find attached excel file.
The presence of Text in the "State and trend of Marine... Aureliano Gentile
05:07 PM D4Science Infrastructure Task #12935: sdi-service: upgrade commons-codec library: Updated remote build against gcube 4.13 has been performed. Report available here : http://etics.esl.eng.it/etics-rep... Fabio Sinibaldi
04:56 PM D4Science Infrastructure Task #12935 (In Progress): sdi-service: upgrade commons-codec library: Roberto Cirillo
04:55 PM D4Science Infrastructure Task #12935 (Closed): sdi-service: upgrade commons-codec library: It's needed to upgrade the commons-codec library from 1.2 to 1.8 on sdi.d4science.org.
Roberto Cirillo
12:22 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory: I see that the sessions directory under /tmp is empty and I see CKAN sessions into the memcache data, so I guess the ... Andrea Dell'Amico
11:49 AM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory: Hi @andrea.dellamico@isti.cnr.it,
I just performed some tests in dev and the catalogue ckan-d seems to work fine.... Francesco Mangiacrapa
11:18 AM D4Science Infrastructure Incident #12923 (Feedback): Workspace public folders are shown as regular shared folders: The fix has been released on preoprod Francesco Mangiacrapa
11:17 AM D4Science Infrastructure Incident #12922 (Feedback): Workspace get link not working: The issue has been fixed and the patched Workspace deployed on preprod. Francesco Mangiacrapa

Nov 22, 2018

06:39 PM D4Science Infrastructure Task #12927: Thredds WMS AquaMaps configuration: The archive has been stored in Workspace :
* path : VRE Folders/gCube/Configuration files/THREDDS 4.6/customPalettes... Fabio Sinibaldi
05:03 PM D4Science Infrastructure Task #8935 (Closed): Delete Statistical Service from the VRE Modeler resource in all VOs: Statistical service removed as reported here: #12606 Roberto Cirillo
05:03 PM D4Science Infrastructure Task #8935 (In Progress): Delete Statistical Service from the VRE Modeler resource in all VOs: Roberto Cirillo
04:56 PM D4Science Infrastructure Task #12425 (Closed): Enable TLS/SSL on the mongodb clusters: Upgrade done. Roberto Cirillo
03:47 PM D4Science Infrastructure Task #12742 (Closed): DataMiner - Support Python 3.6: The DMPoolManager was released in gCube 4.13.
Now, it is possible to create algorithms for Python 3.6 specifically t... Giancarlo Panichi
03:37 PM D4Science Infrastructure Task #12789 (Closed): DMPoolManger - Support Python 3.6: The component has been released in gCube 4.13 see ticket #12440 Giancarlo Panichi
02:25 PM StocksAndFisheriesKB Feature #12278: Complete Citation development: I just noticed this citation and it says "FAO 2018" https://bluebridge.d4science.org/group/grsf_admin/data-catalogue?... Aureliano Gentile
02:23 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Sure. Attached you will find the corresponding titles Yannis Marketakis
01:55 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Thanks, I'll review. Actually with the title next to the URL it would be much easier for me to spot which are assessm... Aureliano Gentile
12:29 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Attached you will find the list of stocks records that have state and trend info and do not have time-series info.
... Yannis Marketakis
11:44 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: One clarification: if the record has status trend indicators then it is an Assessment Unit by default. These status i... Aureliano Gentile
11:25 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Thank you for the answer. So I will update the type of the record. Would you like to do it for all the records that f... Yannis Marketakis
11:20 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Thanks, I confirm the overall requirement https://support.d4science.org/projects/stocksandfisherieskb/wiki/GRSF_datab... Aureliano Gentile
11:05 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: @aureliano.gentile@fao.org As regards the record http://data.d4science.org/ctlg/GRSF_Admin/ee1d7967-6da2-3d8a-88d5-c... Yannis Marketakis
01:22 PM D4Science Infrastructure Task #11977 (Closed): Make the tagme service more reliable.: Andrea Dell'Amico
12:59 PM D4Science Infrastructure Task #11977: Make the tagme service more reliable.: The load balancer is already configured to use both tagme1 and tagme2 as tagme backends. tagme2 will be in use as soo... Andrea Dell'Amico
01:20 PM D4Science Infrastructure VM Creation #12930 (Closed): New TAGME instance at GARR-PA1: The VM has been provisioned and it is active. Andrea Dell'Amico
12:52 PM D4Science Infrastructure VM Creation #12930 (In Progress): New TAGME instance at GARR-PA1: hostname is tagme2.garr.d4science.org. The provisioning is running. Andrea Dell'Amico
12:50 PM D4Science Infrastructure VM Creation #12930 (Closed): New TAGME instance at GARR-PA1: So that we run two identical instances. Andrea Dell'Amico
12:28 PM D4Science Infrastructure Task #11976 (Closed): New load balancer for the tagme service: Done. Andrea Dell'Amico
11:35 AM D4Science Infrastructure Upgrade #12738 (Completed): D4Science Infrastructure Upgrade to gCube 4.13.0: Roberto Cirillo
11:06 AM StocksAndFisheriesKB Task #12856: Verification of GRSF merging process: Thank you @emmanuel.blondel1@gmail.com .
I will invoke this in the merging process and let you know if we face any p... Yannis Marketakis
10:59 AM StocksAndFisheriesKB Bug #12419 (Closed): Fishing Pressure time series is missing in several records: Yannis Marketakis
10:54 AM StocksAndFisheriesKB Bug #12419: Fishing Pressure time series is missing in several records: The missing time-series have been added into GRSF KB (aprox. 400 were missing).
As a proof of concept we have update... Yannis Marketakis
10:58 AM D4Science Infrastructure Incident #12923 (In Progress): Workspace public folders are shown as regular shared folders: Francesco Mangiacrapa
10:33 AM D4Science Infrastructure Upgrade #12772 (Completed): D4Science Preprod Gateway upgrade to gCube 4.13.0: Massimiliano Assante
10:00 AM D4Science Infrastructure Upgrade #12772: D4Science Preprod Gateway upgrade to gCube 4.13.0: can this ticket be closed? Roberto Cirillo
10:30 AM D4Science Infrastructure Upgrade #12773 (Completed): D4Science Gateway upgrade to gCube 4.13.0: Massimiliano Assante
10:30 AM D4Science Infrastructure Upgrade #12773 (In Progress): D4Science Gateway upgrade to gCube 4.13.0: Massimiliano Assante
10:00 AM D4Science Infrastructure Upgrade #12773: D4Science Gateway upgrade to gCube 4.13.0: Can this ticket be closed? Roberto Cirillo

Nov 21, 2018

07:06 PM D4Science Infrastructure Task #12927 (Closed): Thredds WMS AquaMaps configuration: We need to modify provisioning tasks in order to satisfy some AquaMaps custom WMS configuration. The following operat... Fabio Sinibaldi
07:04 PM D4Science Infrastructure Task #11976: New load balancer for the tagme service: Tomorrow I'll change the DNS entry. Andrea Dell'Amico
07:03 PM D4Science Infrastructure Task #11976: New load balancer for the tagme service: Without rate limiting. I inserted the above URLs inside the haproxy configuration as a reference, but I would not act... Andrea Dell'Amico
01:43 PM D4Science Infrastructure Task #11976 (In Progress): New load balancer for the tagme service: Andrea Dell'Amico
07:04 PM D4Science Infrastructure VM Creation #11975 (Closed): New TAGME instance at GARR: Andrea Dell'Amico
01:42 PM D4Science Infrastructure VM Creation #11975 (Feedback): New TAGME instance at GARR: Andrea Dell'Amico
12:29 AM D4Science Infrastructure VM Creation #11975: New TAGME instance at GARR: The tagme instance is working, it seems: I succesfully got results using the nagios URLs checks.
We can do some more... Andrea Dell'Amico
06:39 PM StocksAndFisheriesKB Task #12856: Verification of GRSF merging process: Dear @marketak@ics.forth.gr for spatial, see https://support.d4science.org/projects/stocksandfisherieskb/wiki/18-11-1... Emmanuel Blondel
06:21 PM D4Science Infrastructure Incident #12925: geojsonio R package is not installed on all R instances: Great, thanks a lot, it works now. Emmanuel Blondel
05:41 PM D4Science Infrastructure Incident #12925 (Closed): geojsonio R package is not installed on all R instances: The additional repository has been added, and the `geojsonio` reinstalled everywhere.
Andrea Dell'Amico
04:25 PM D4Science Infrastructure Incident #12925: geojsonio R package is not installed on all R instances: The latest version of the package depends on a development library that's not part of the system distribution. I'm ad... Andrea Dell'Amico
03:38 PM D4Science Infrastructure Incident #12925: geojsonio R package is not installed on all R instances: It is true it seems that after the last update the synchronization of the R packages does not work on some machines. ... Giancarlo Panichi
03:08 PM D4Science Infrastructure Incident #12925: geojsonio R package is not installed on all R instances: indeed it should, but apparently it is not on all instances. The log extract was picked up from Dataminer. Emmanuel Blondel
03:05 PM D4Science Infrastructure Incident #12925 (In Progress): geojsonio R package is not installed on all R instances: Ok I do a check, however this package R should already be installed. Giancarlo Panichi
02:51 PM D4Science Infrastructure Incident #12925 (Closed): geojsonio R package is not installed on all R instances: Running the GRSF_admin algorithm BBoxunion #12901, the process fails sometimes reporting this log:
``
Loading req... Emmanuel Blondel
04:25 PM D4Science Infrastructure Task #12921 (Closed): RStudio - Does not work correctly on some nodes: OK. The state has been cleaned properly. I'm going to close this ticket. Roberto Cirillo
04:09 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: Ok, now it works on ip-90-147-167-3.ct1.garrservices.it for me. Giancarlo Panichi
04:02 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: Now the scopes are ok. Please @g.panichi@isti.cnr.it Could you repeat the test on ip-90-147-167-3.ct1.garrservices.it? Roberto Cirillo
03:53 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: I just run the playbook successfully on all the GARR rstudio servers, this way:
~~~
./run.sh rstudio.yml -i inven... Andrea Dell'Amico
03:42 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: It cannot be a ssh problem. I'm able to access in ssh as root and as gcube but when I run the playbook, I've that err... Roberto Cirillo
03:35 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: It seems something transient, I can access and I see you have a shell on that VM. Andrea Dell'Amico
03:31 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: Not so easy, I've the following error when run the playbook:
~~~
fatal: [ip-90-147-167-3.ct1.garrservices.it]: UN... Roberto Cirillo
03:29 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: Fine by me. To cleanup the duplicate scopes entries, you can run the playbook using the token and disabiling the merg... Andrea Dell'Amico
03:21 PM D4Science Infrastructure Task #12921 (In Progress): RStudio - Does not work correctly on some nodes: I'm going to run the playbook first on ip-90-147-167-3 if all will be successful, I'm going to run it on every garr i... Roberto Cirillo
02:31 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: There are two problem on garr vms:
The first one is the state, verified on ip-90-147-167-3;
The second one is the ... Roberto Cirillo
01:01 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: The playbook run with the same parameters everywhere, I don't really know why some scopes are discarded. Isn't there ... Andrea Dell'Amico
12:50 PM D4Science Infrastructure Task #12921: RStudio - Does not work correctly on some nodes: The problem here seems to be the same verified yesterday on some dataminer instances @garr . The call is rejected bec... Roberto Cirillo
12:16 PM D4Science Infrastructure Task #12921 (Closed): RStudio - Does not work correctly on some nodes: RStudio does not work correctly on some nodes of the GARR:
~~~
http://ip-90-147-167-3.ct1.garrservices.it/r-conne... Giancarlo Panichi
03:41 PM D4Science Infrastructure Incident #12926 (Closed): https://tunaatlas.d4science.org/ is broken (503 Service Unavailable): It's not a valid URL and it never was. The valid ones are:
https://tunaatlas.d4science.org/geoserver
https://tuna... Andrea Dell'Amico
03:08 PM D4Science Infrastructure Incident #12926 (Closed): https://tunaatlas.d4science.org/ is broken (503 Service Unavailable): @fabio.sinibaldi@isti.cnr.it may have more information about this service. Massimiliano Assante
03:11 PM D4Science Infrastructure Incident #12922 (In Progress): Workspace get link not working: Francesco Mangiacrapa
12:28 PM D4Science Infrastructure Incident #12922 (Closed): Workspace get link not working: Massimiliano Assante
03:01 PM D4Science Infrastructure Support #12901 (Closed): Impossible to publish a Dataminer algorithm: There was simply a configuration problem due most likely to the last update of the infrastructure.
However, in your ... Giancarlo Panichi
02:48 PM D4Science Infrastructure Support #12901: Impossible to publish a Dataminer algorithm: OK, can you please explain what was the problem? because so far I never been able to publish an algorithm alone, each... Emmanuel Blondel
11:52 AM D4Science Infrastructure Support #12901: Impossible to publish a Dataminer algorithm: Hi @emmanuel.blondel1@gmail.com , the problem has been solved, now your algorithm is published correctly:
* https:... Giancarlo Panichi
01:43 PM D4Science Infrastructure Task #11977 (In Progress): Make the tagme service more reliable.: Andrea Dell'Amico
01:28 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Lars Valentin wrote:
>
> Unfortunately, I still have no feedback at all by the links you provided me.
>
> I ne... Andrea Dell'Amico
07:07 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure: Hey @andrea.dellamico@isti.cnr.it ,
the new FSK version was installed fine and is running.
Unfortunately, I st... Lars Valentin
12:48 PM D4Science Infrastructure Incident #12923 (Closed): Workspace public folders are shown as regular shared folders: In the previous version the public folders were displayed in Blue (see attached image) now they are displayed (wrong... Massimiliano Assante
11:50 AM StocksAndFisheriesKB Bug #12420 (Closed): Narrative text is messed up when in multiple xml nodes: Yannis Marketakis
11:38 AM StocksAndFisheriesKB Bug #12420: Narrative text is messed up when in multiple xml nodes: Thanks for your reply @francesco.mangiacrapa@isti.cnr.it .
So, I will replace ';' with whitespace. Yannis Marketakis

Nov 20, 2018

07:46 PM D4Science Infrastructure Support #12901: Impossible to publish a Dataminer algorithm: For escaping double quotes, SAI doesn't allow it: ``Error Default: Attention character " is not allowed``, although m... Emmanuel Blondel
07:38 PM D4Science Infrastructure Support #12901: Impossible to publish a Dataminer algorithm: With single quote, i could save/publish the algorithm (although i'm not guaranteed that the business logic is working... Emmanuel Blondel
11:45 AM D4Science Infrastructure Support #12901 (Feedback): Impossible to publish a Dataminer algorithm: Hi @emmanuel.blondel1@gmail.com, the problem is that you are using double quotes in the declaration of default values... Giancarlo Panichi
07:44 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory: Functionality active in dev. The variable
~~~
ckan_memcache_sessions: True
~~~
must be created under group_va... Andrea Dell'Amico
06:59 PM D4Science Infrastructure Task #12827 (In Progress): Configure CKAN to store .cache files (that are session info) in memory: Going to reconfigure the dev instance.
Andrea Dell'Amico
06:36 PM D4Science Infrastructure VM Creation #11975 (In Progress): New TAGME instance at GARR: VM at GARR-CT1 is up as tagme1.garr.d4science.org.
I'm collecting the tagme war files and the local data so that we... Andrea Dell'Amico
05:54 PM D4Science Infrastructure Incident #12915 (Closed): Random authorization error when invoking DM: Giancarlo Panichi
05:54 PM D4Science Infrastructure Incident #12915 (Resolved): Random authorization error when invoking DM: Giancarlo Panichi
05:45 PM D4Science Infrastructure Incident #12915 (In Progress): Random authorization error when invoking DM: @roberto.cirillo@isti.cnr.it has canceled the status of the services and now these machines are back to work properly. Giancarlo Panichi
05:29 PM D4Science Infrastructure Incident #12915: Random authorization error when invoking DM: I did some tests and the machines are these:
~~~
http://dm-192-168-100-3.garr.d4science.org/
http://dm-192-168-1... Giancarlo Panichi
04:55 PM D4Science Infrastructure Incident #12915 (Closed): Random authorization error when invoking DM: Randomly, DataMiner cannot be contacted because it reports an authorization error, which prevents the service to be i... Gianpaolo Coro
05:41 PM D4Science Infrastructure Incident #12912 (Closed): Issue when downloading file from the DM DataSpace portlet: This problem was due to the firewall that did not allow the ssl communications.
Now everything works correctly.
So ... Giancarlo Panichi
12:01 PM D4Science Infrastructure Incident #12912 (Closed): Issue when downloading file from the DM DataSpace portlet: The Download button of the DM DataSpace does not work. It produces an error like:
~~~
javax.servlet.ServletExcept... Gianpaolo Coro
04:49 PM D4Science Infrastructure Upgrade #12738 (In Progress): D4Science Infrastructure Upgrade to gCube 4.13.0: Roberto Cirillo
04:49 PM D4Science Infrastructure Upgrade #12738 (Planned): D4Science Infrastructure Upgrade to gCube 4.13.0: Roberto Cirillo
04:47 PM StocksAndFisheriesKB Bug #12420: Narrative text is messed up when in multiple xml nodes: It is (wrongly) correct, I would say ;-)
Anyway, so the best would be to add simply a space.
With thanks Aureliano Gentile
04:44 PM StocksAndFisheriesKB Bug #12420: Narrative text is messed up when in multiple xml nodes: Yannis Marketakis wrote:
> I think that we cannot use HTML formatting tags (i.e. ` , , `, etc.) for the pro... Francesco Mangiacrapa
03:44 PM StocksAndFisheriesKB Bug #12420 (Feedback): Narrative text is messed up when in multiple xml nodes: I think that we cannot use HTML formatting tags (i.e. ` , , `, etc.) for the properties of the catalog. @fra... Yannis Marketakis
03:18 PM StocksAndFisheriesKB Bug #12420: Narrative text is messed up when in multiple xml nodes: Thanks a lot!
Actually multiple text nodes are generated by the FIRMS Word-to-XML converter tool for handling differ... Aureliano Gentile
01:58 PM StocksAndFisheriesKB Bug #12420 (Closed): Narrative text is messed up when in multiple xml nodes: The issue has been resolved. The narratives for the fields scientific_advice and state_and_trend are concatenated whi... Yannis Marketakis
12:34 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: Practically, if we update a record it will have the same effect with republishing it.
As regards your comment about... Yannis Marketakis
12:00 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog: It might be good to republish the entire data set to avoid any undetected issues.
In example today I was preparing a... Aureliano Gentile
09:32 AM StocksAndFisheriesKB Bug #12906 (Closed): Update "problematic" records in the GRSF admin catalog: Because of the related issues, there are several records that have problems. Once all these problems are resolved, we... Yannis Marketakis
12:14 PM D4Science Infrastructure VRE #12913 (Removed): gCubeApps/ICOS_ETC VRE Removal: The VRE will be undeployed next week Massimiliano Assante
12:09 PM D4Science Infrastructure VRE #12344 (Released): AlienAndInvasiveSpecies VRE: Massimiliano Assante
12:08 PM D4Science Infrastructure VRE #12344 (Available): AlienAndInvasiveSpecies VRE: Massimiliano Assante
10:15 AM D4Science Infrastructure Task #12444 (Closed): Enable TLS/SSL on the mongodb production cluster: Roberto Cirillo
10:11 AM D4Science Infrastructure Upgrade #12868 (Completed): FARM VO upgrade to gCube 4.13: Roberto Cirillo
10:10 AM D4Science Infrastructure Upgrade #12867 (Completed): gCubeApps VO upgrade to gCube 4.13: Roberto Cirillo
09:44 AM StocksAndFisheriesKB Bug #12261 (Closed): Multiple time series in GRSF from RAM data: Yannis Marketakis
09:44 AM StocksAndFisheriesKB Bug #12261: Multiple time series in GRSF from RAM data: The issue has been resolved.
As a proof of concept, I ve updated one GRSF record (http://data.d4science.org/ctlg/... Yannis Marketakis
09:34 AM StocksAndFisheriesKB Bug #12424 (Closed): Stock status FAO categories not properly handled: The issue has been resolved.
As a proof of concept I've updated the records in the catalog (http://data.d4science.o... Yannis Marketakis

Nov 19, 2018

07:04 PM D4Science Infrastructure Upgrade #12865 (Completed): D4Science Root VO upgrade to gCube 4.13: Roberto Cirillo
02:29 PM D4Science Infrastructure Upgrade #12865 (In Progress): D4Science Root VO upgrade to gCube 4.13: Roberto Cirillo
06:41 PM D4Science Infrastructure Incident #12896 (Closed): GRSF_Admin - RStudio unavailable: Andrea Dell'Amico
10:59 AM D4Science Infrastructure Incident #12896 (Resolved): GRSF_Admin - RStudio unavailable: Thank you, it works Emmanuel Blondel
10:46 AM D4Science Infrastructure Incident #12896: GRSF_Admin - RStudio unavailable: @emmanuel.blondel1@gmail.com now your user is working on GRSF_Admin VRE.
Please could you check? Roberto Cirillo
10:10 AM D4Science Infrastructure Incident #12896: GRSF_Admin - RStudio unavailable: Seems to be a hostname problem on the following garr VM: ip-90-147-167-29.ct1.garrservices.it
The /etc/hostname fi... Roberto Cirillo
09:46 AM D4Science Infrastructure Incident #12896 (In Progress): GRSF_Admin - RStudio unavailable: Roberto Cirillo
09:10 AM D4Science Infrastructure Incident #12896 (Closed): GRSF_Admin - RStudio unavailable: ``
Error (400) : this resource cannot process this request because it is malformed
Stacktrace:
org.gcube.smartgear... Emmanuel Blondel
06:36 PM D4Science Infrastructure Support #12901 (Closed): Impossible to publish a Dataminer algorithm: I've tried to publish an algorithm in SAI, but I get an error message with logs:
``
An error occurred while deplo... Emmanuel Blondel
04:33 PM D4Science Infrastructure Upgrade #12869 (Completed): D4Research VO upgrade to gCube 4.13: Roberto Cirillo
02:30 PM D4Science Infrastructure Upgrade #12869 (In Progress): D4Research VO upgrade to gCube 4.13: Roberto Cirillo
03:58 PM StocksAndFisheriesKB Bug #12261 (Feedback): Multiple time series in GRSF from RAM data: The publisher client has been updated.
Whenever there are time-series coming from RAM data source, then instead of t... Yannis Marketakis
03:49 PM StocksAndFisheriesKB Bug #12424 (In Progress): Stock status FAO categories not properly handled: OK. Then I suggest to keep the controlled vocabulary for now and we'll see in the future if we want to relax this con... Yannis Marketakis
03:45 PM StocksAndFisheriesKB Bug #12424: Stock status FAO categories not properly handled: The FAO state of a stock is based on a controlled vocabulary, which however it changes across time. The above new ite... Aureliano Gentile
03:35 PM StocksAndFisheriesKB Bug #12424: Stock status FAO categories not properly handled: Aureliano Gentile wrote:
> I thought the categories were transparent to the process and received blindly whatever is... Yannis Marketakis
03:21 PM StocksAndFisheriesKB Bug #12424: Stock status FAO categories not properly handled: I thought the categories were transparent to the process and received blindly whatever is in the source databases (le... Aureliano Gentile
02:56 PM StocksAndFisheriesKB Bug #12424 (Feedback): Stock status FAO categories not properly handled: This issue appeared because there were some of the identified categories missing (not fully exploited in this case). ... Yannis Marketakis
02:29 PM D4Science Infrastructure Upgrade #12868 (In Progress): FARM VO upgrade to gCube 4.13: Roberto Cirillo
02:29 PM D4Science Infrastructure Upgrade #12867 (In Progress): gCubeApps VO upgrade to gCube 4.13: Roberto Cirillo

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