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Incident #12925

closed

geojsonio R package is not installed on all R instances

Added by Emmanuel Blondel over 6 years ago. Updated over 6 years ago.

Status:
Closed
Priority:
High
Assignee:
_InfraScience Systems Engineer
Category:
Application
Target version:
Start date:
Nov 21, 2018
Due date:
Nov 21, 2018
% Done:

100%

Estimated time:
Infrastructure:
Production

Description

Running the GRSF_admin algorithm BBoxunion #12901, the process fails sometimes reporting this log:


Loading required package: jsonlite
Loading required package: geojsonio
Error in loadNamespace(name) : there is no package called ‘geojsonio’
In addition: Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘geojsonio’
Error in loadNamespace(name) : there is no package called ‘geojsonio’

Somehow, the process is sometimes balanced to an R instance that doesn't have geojsonio package. Could you please fix it?

Thanks a lot in advance


Related issues

Related to D4Science Infrastructure - Support #12901: Impossible to publish a Dataminer algorithmClosedEmmanuel BlondelNov 19, 2018Nov 21, 2018

Actions
Actions #1

Updated by Emmanuel Blondel over 6 years ago

  • Related to Support #12901: Impossible to publish a Dataminer algorithm added
Actions #2

Updated by Giancarlo Panichi over 6 years ago

  • Status changed from New to In Progress

Ok I do a check, however this package R should already be installed.

Actions #3

Updated by Emmanuel Blondel over 6 years ago

indeed it should, but apparently it is not on all instances. The log extract was picked up from Dataminer.

Actions #4

Updated by Giancarlo Panichi over 6 years ago

  • % Done changed from 0 to 20

It is true it seems that after the last update the synchronization of the R packages does not work on some machines.
We are fixing the problem.

Actions #5

Updated by Andrea Dell'Amico over 6 years ago

The latest version of the package depends on a development library that's not part of the system distribution. I'm adding the additional repository, after that I'll force a reinstall of the geojsonio package.

Actions #6

Updated by Andrea Dell'Amico over 6 years ago

  • Status changed from In Progress to Closed
  • % Done changed from 20 to 100

The additional repository has been added, and the geojsonio reinstalled everywhere.

Actions #7

Updated by Giancarlo Panichi over 6 years ago

  • Due date set to Nov 21, 2018
Actions #8

Updated by Emmanuel Blondel over 6 years ago

Great, thanks a lot, it works now.

Actions

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