Support #12901
closed
Impossible to publish a Dataminer algorithm
100%
Description
I've tried to publish an algorithm in SAI, but I get an error message with logs:
An error occurred while deploying your algorithm
Here are the error details:
Installation failed. Return code=2
Algorithm details:
User: Emmanuel Blondel
Algorithm name: GEOGRSF_BBOXUNION
Staging DataMiner Host: dataminer-proto-ghost.d4science.org
Caller VRE: /d4science.research-infrastructures.eu/gCubeApps/RPrototypingLab
Target VRE: /d4science.research-infrastructures.eu/gCubeApps/RPrototypingLab
I've tried also in the target VRE (GRSF_Admin), but I got same error (with similar logs).
Can you please advise how to fix this? I can share the SAI project if needed.
Thanks in advance
Related issues
Updated by Andrea Dell'Amico over 6 years ago
- Assignee changed from _InfraScience Systems Engineer to Giancarlo Panichi
Updated by Giancarlo Panichi over 6 years ago
- Status changed from New to Feedback
- Assignee changed from Giancarlo Panichi to Emmanuel Blondel
- Priority changed from High to Normal
- % Done changed from 0 to 100
Hi @emmanuel.blondel1@gmail.com, the problem is that you are using double quotes in the declaration of default values:
identifier = "geom1"
defaultValue="'{"type":"Polygon","coordinates":[[[-20,-50],[-20,-6],[30,-6],[30,-50],[-20,-50]]]}'"
title="A geometry in GeoJSON format"
identifier = "geom2"
defaultValue="'{"type":"Polygon","coordinates":[[[-10,-50],[-20,-6],[40,-6],[40,-50],[-10,-50]]]}'"
title="A geometry in GeoJSON format"
Try with the single quote for:
"type" "Polygon" "coordinates"
or escape them
Updated by Emmanuel Blondel over 6 years ago
With single quote, i could save/publish the algorithm (although i'm not guaranteed that the business logic is working with that single quote, as it is not a valid geojson anymore. I made some trys with escaping double quote (what I should provide here normally) but there were unsuccessfull.
With single quote, I received the success message for the algorithm publication:
``
The installation of the algorithm is completed successfully.
You can retrieve experiment results under the '/DataMiner' e-Infrastructure Workspace folder or from the DataMiner interface.
Algorithm details:
User: Emmanuel Blondel
Algorithm name: GEOGRSF_BBOXUNION
Staging DataMiner Host: dataminer-proto-ghost.d4science.org
Caller VRE: /d4science.research-infrastructures.eu/FARM/GRSF_Admin
Target VRE: /d4science.research-infrastructures.eu/FARM/GRSF_Admin
``
But I don't see the algorithm, neither on GRSF_Admin, nor on RPrototypingLab, although the message says the algorithm has been published. I've tried to logout/login from the e-infra, but still the same, the algo is not available. Any idea?
Thanks
Updated by Emmanuel Blondel over 6 years ago
For escaping double quotes, SAI doesn't allow it: Error Default: Attention character " is not allowed, although my string input (string representation of geojson) is correctly escaped. Sounds that SAI doesn't support escaped strings
Updated by Giancarlo Panichi over 6 years ago
- Due date set to Nov 21, 2018
Hi @emmanuel.blondel1@gmail.com , the problem has been solved, now your algorithm is published correctly:
Updated by Emmanuel Blondel over 6 years ago
OK, can you please explain what was the problem? because so far I never been able to publish an algorithm alone, each time the process is not available. Is it the publication in the target VRE still needs to be done manually on your side?
Updated by Emmanuel Blondel over 6 years ago
- Related to Incident #12925: geojsonio R package is not installed on all R instances added
Updated by Giancarlo Panichi over 6 years ago
- Status changed from Feedback to Closed
There was simply a configuration problem due most likely to the last update of the infrastructure.
However, in your specific case the problem is that in general you should use a file when the parameters you are dealing with are structured similar to json or xml.
Now you can safely publish the algorithms using GRSF Admin VRE.
So now it works, I close the ticket.
