Activity

From Aug 30, 2016 to Sep 28, 2016

Sep 28, 2016

10:09 PM Task #5215 (Closed): Social Networking facilities required in devVRE: Since we have moved the algorithms development environment to the production environment, the social networking facil... Gianpaolo Coro
07:31 PM Task #5178: Enable caching of static content (images) on gateway production cluster: Done on every instance.
Andrea Dell'Amico
06:31 PM Task #5178: Enable caching of static content (images) on gateway production cluster: please change the expiration time from 1 day to 1 month Massimiliano Assante
03:47 PM Task #5178: Enable caching of static content (images) on gateway production cluster: Done. Sorry for the disservice.
Andrea Dell'Amico
01:44 PM Task #5178: Enable caching of static content (images) on gateway production cluster: yes please, tell me when it's done Massimiliano Assante
07:13 PM Task #3475: Add 2 OrientDB instances: We also need to tweak the java heap configuration. Andrea Dell'Amico
07:10 PM Task #3475: Add 2 OrientDB instances: The playbook is ready and the configuration seems corret. We have errors on the hooks, because we didn't create the r... Andrea Dell'Amico
04:42 PM Task #5210 (Closed): Dismiss iisg-ldap.research-infrastructures.eu: I've shut down the VM. Its configuration is still available if a need arises.
Andrea Dell'Amico
04:41 PM Task #5210 (Closed): Dismiss iisg-ldap.research-infrastructures.eu: The VM was a slave ldap server for the socialhistoryservices (HOPE) project.
It never had a connection in a while, a... Andrea Dell'Amico
04:38 PM Task #5209 (Closed): Dismiss auth2.research-infrastructures.eu: The VM has been shut down.
Andrea Dell'Amico
04:38 PM Task #5209 (Closed): Dismiss auth2.research-infrastructures.eu: The VM wanted to be a redundancy server for auth1.research-infrastructures.eu but no service is installed on it. Andrea Dell'Amico
04:35 PM Task #5180 (Closed): New playbook that installs the authorization service: The playbook works. It has been tested on the dev authorization server.
Andrea Dell'Amico

Sep 27, 2016

07:32 PM Task #5178 (Feedback): Enable caching of static content (images) on gateway production cluster: The new configuration is active on dev and preprod. Let me know if it can be provisioned on production too.
Andrea Dell'Amico
06:52 PM Task #5178 (In Progress): Enable caching of static content (images) on gateway production cluster: I'm going to test in dev, than preproduction. Andrea Dell'Amico
05:59 PM Task #5178 (Closed): Enable caching of static content (images) on gateway production cluster: nginx should cache static content (images) of course the cache should expire after some time Massimiliano Assante
07:22 PM Task #5139 (In Progress): New VM for hosting a new istance of tabulardata service: tabulardata2.d4science.org running with smartgears and postgresql, no database. Tommaso Piccioli
06:25 PM Task #5180 (In Progress): New playbook that installs the authorization service: The playbook is ready to be tested.
Andrea Dell'Amico
06:24 PM Task #5180 (Closed): New playbook that installs the authorization service: nginx/tomcat are needed. https too.
The authorization service needs a postgresql backend, and pgpool before postgr... Andrea Dell'Amico
06:16 PM Task #5179 (Closed): Implement the new container.xml configuration needed by the authorization service in the ansible roles: Done. The new smartgears is running on node17.d4science.org and node19.d4science.org.
Andrea Dell'Amico
06:15 PM Task #5179: Implement the new container.xml configuration needed by the authorization service in the ansible roles: The container.xml file is now assembled from three different parts. The first and the last are pieces of the old temp... Andrea Dell'Amico
06:11 PM Task #5179 (Closed): Implement the new container.xml configuration needed by the authorization service in the ansible roles: smartgears need a totally different configuration procedure.
Andrea Dell'Amico
03:34 PM Task #5169 (Closed): Prepare environment to test Generic Worker on Dataminer: Some machines are required to finally test the porting of GW on Dataminer.
First, the installation of Dataminer run... Gianpaolo Coro
03:01 PM Task #4610: Algorithms installation in D4Science: | | | | | | |
|---|:---:|:---:|:---:|:---|---|
| Algorithm|Author|Category|Deploy|Install|Note|
| ICHTHYOP_MODEL... Giancarlo Panichi
02:07 PM Task #5162 (Closed): Disable firewall in node74.d4science.org: Data streaming seems working. Fabio Sinibaldi
12:54 PM Task #5162 (Feedback): Disable firewall in node74.d4science.org: Andrea Dell'Amico
12:54 PM Task #5162 (In Progress): Disable firewall in node74.d4science.org: Andrea Dell'Amico
12:46 PM Task #5162: Disable firewall in node74.d4science.org: Instead of disabling it, I'm going to open the resultset ports range (3000,3050). Andrea Dell'Amico
12:13 PM Task #5162 (Closed): Disable firewall in node74.d4science.org: The portlet is unable to open resultsets initialized from server running in node7.d4science.org.
Cause : %org.gcube... Fabio Sinibaldi
11:47 AM Support #5159 (Closed): Dataminer in the BiodiversityLab VRE: Is it possible to put the Dataminer portlet in the BiodiversityLab VRE, leaving the StatMan portlet visible to VRE Ma... Gianpaolo Coro
10:46 AM Task #5128: Please deploy smart-executor 1.4 on devNext: There was a very old smart-executor on nexus (26 May). Now, I've successfully installed the new smart-executor on nod... Roberto Cirillo
09:42 AM Task #5128: Please deploy smart-executor 1.4 on devNext: The problem is that the smart-executor installed is not compatible with smartgears-2.0.0, it brings old versions of s... Lucio Lelii
10:34 AM Task #4617 (Feedback): Smart-executor- node24.d4science.org: Too Many Open Files: The new social-data-indexer-plugin which is going to be released in gcube 4.1 works as expected. Connections pool are... Costantino Perciante

Sep 26, 2016

06:26 PM Task #5128: Please deploy smart-executor 1.4 on devNext: The following nodes have been upgraded to Smartgears 2.0.0-SNAPSHOT and smart-executor-service 1.4.0-SNAPSHOT:
~~... Roberto Cirillo
02:36 PM Task #5128 (In Progress): Please deploy smart-executor 1.4 on devNext: Roberto Cirillo
03:48 PM Task #4919: Enhance raster data metadata for the data catalogue: The Thredds layers should be 591 in the dev. environment. The VLIZ layers are 8. I don't know where the discrepancy o... Gianpaolo Coro
03:45 PM Task #5147 (Closed): smart-generic-worker: jar-with-dependencies.jar is missing in gCube Snapshots Repository: Gianpaolo Coro
03:44 PM Task #5147 (In Progress): smart-generic-worker: jar-with-dependencies.jar is missing in gCube Snapshots Repository: The plugin to generate the jar with dependencies had been deleted for unknown reason. Gianpaolo Coro
03:23 PM Task #5147 (Closed): smart-generic-worker: jar-with-dependencies.jar is missing in gCube Snapshots Repository: Please could you deploy the smart-generic-worker (jar-with-dependencies) in gCube Snapshots ?
From nexus, I see on... Roberto Cirillo
03:23 PM Task #5146 (Closed): Reloading Tomcat classpath: In order to move towards a fully automatic installation of the Dataminer algorithms, the classpath of a Tomcat servic... Gianpaolo Coro
12:06 PM Task #5139 (Closed): New VM for hosting a new istance of tabulardata service: The new VM should have a container smartgears, the same
resources of tabulardata.d4science.org VM (with the same P... Roberto Cirillo
10:02 AM Task #5127 (Closed): mongo.p: full resynch is needed: The resync has been completed successfully.
The space used by Mongo has been reduced from over 750 GB to 358 GB. Thi... Roberto Cirillo

Sep 23, 2016

07:10 PM Task #3475: Add 2 OrientDB instances: I'm assembling a oriendb ansible role to provision all the pieces.
Andrea Dell'Amico
06:30 PM Support #5130 (Closed): Add applications to the prototyping VRE: The following applications should be available in the RPrototypeLab VRE, in order to let users try to combine their p... Gianpaolo Coro
06:15 PM Task #5123 (Closed): deploy patch fixing short URLs issue for data-miner and stat. alg importer portlets on production gateways: The application is generally OK, but a random effect was observed. For shared folders, the Workspace path is not corr... Gianpaolo Coro
02:22 PM Task #5123 (Feedback): deploy patch fixing short URLs issue for data-miner and stat. alg importer portlets on production gateways: @g.panichi@isti.cnr.it @gianpaolo.coro@isti.cnr.it please test the applications and close the ticket if everything is ok Massimiliano Assante
02:05 PM Task #5123 (Closed): deploy patch fixing short URLs issue for data-miner and stat. alg importer portlets on production gateways: patch fixing short URLs issue implies to update:
* statistical-algorithms-importer version/ build 1.2.0-4.0.0-1316... Massimiliano Assante
06:04 PM Incident #5104 (Closed): Use long URLs in produced WPS http links: Now, a new version of SAI and Data Miner is released into production.
These versions use the standard http link and ... Giancarlo Panichi
05:58 PM Task #5127 (In Progress): mongo.p: full resynch is needed: Roberto Cirillo
03:21 PM Task #5127 (Closed): mongo.p: full resynch is needed: In order to prevent disk reaching 100% full, it's need a full resynch of mongoDB data storage.
By resyncing, all the... Roberto Cirillo
04:50 PM Task #5128 (Closed): Please deploy smart-executor 1.4 on devNext: Luca Frosini

Sep 22, 2016

05:23 PM Incident #5118 (Closed): VRE Logo not updated when VRE_Manager or Administrator changes it: Massimiliano Assante
05:02 PM Incident #5118 (Closed): VRE Logo not updated when VRE_Manager or Administrator changes it: Massimiliano Assante
02:22 PM Task #4879 (Closed): Re-harvesting of FAO Geonetwork products: Many thanks Emmanuel Blondel
02:18 PM Task #4879: Re-harvesting of FAO Geonetwork products: Fao Layers are now available on D4Science Data Catalogue: https://i-marine.d4science.org/group/imarine-gateway/data-c... Francesco Mangiacrapa
12:56 PM Task #4919: Enhance raster data metadata for the data catalogue: Harvester for /gcube/devsec has been created using the following configuration:
~~~
{ "version": "2.6", "cql": "A... Francesco Mangiacrapa
11:55 AM Support #5103 (Closed): access to git ansible repo: I actually had to login with my email address. Anyway, after resetting my password I could easily login. Thanks! Daniele Pavia
11:08 AM Support #5103: access to git ansible repo: Daniele Pavia wrote:
> Thanks Andrea,
> unfortunately I can't access. The account seems to be active, but I get an ... Andrea Dell'Amico
11:02 AM Support #5103 (In Progress): access to git ansible repo: Thanks Andrea,
unfortunately I can't access with daniele-pavia/changeitasap. The account seems to be active, but I g... Daniele Pavia

Sep 21, 2016

06:15 PM Task #5105: Enable WebSocket support on nginx for infrastructure gateway: so far so good, but I'll wait some days and more testing to close the task Massimiliano Assante
05:03 PM Task #5105 (Feedback): Enable WebSocket support on nginx for infrastructure gateway: I've possibly found a generic solution. Now running on dev2.d4science.org.
The details:
~~~
map $http_upgrade ... Andrea Dell'Amico
04:26 PM Task #5105 (In Progress): Enable WebSocket support on nginx for infrastructure gateway: Andrea Dell'Amico
04:25 PM Task #5105: Enable WebSocket support on nginx for infrastructure gateway: RIght now the situation is the following:
* haproxy already transparently manages the websocket connections
* ngi... Andrea Dell'Amico
04:10 PM Task #5105: Enable WebSocket support on nginx for infrastructure gateway: url for testing: wss://next.d4science.org/workspace-6.14.0-SNAPSHOT/downloadfolder Massimiliano Assante
04:08 PM Task #5105 (Closed): Enable WebSocket support on nginx for infrastructure gateway: WebSocket is a protocol providing full-duplex communication channels over a single TCP connection. It basically allow... Massimiliano Assante
06:07 PM Support #5103 (Feedback): access to git ansible repo: Andrea Dell'Amico
05:57 PM Support #5103 (In Progress): access to git ansible repo: Andrea Dell'Amico
03:55 PM Support #5103 (Closed): access to git ansible repo: Hi,
as per conversation with Roberto Cirillo, I'd like to have access to the ansible repo to take a look at what's b... Daniele Pavia
04:00 PM Incident #5104 (Closed): Use long URLs in produced WPS http links: The WPS http links are being produced (by the Show button) using short http links. This causes the processes to fail,... Gianpaolo Coro

Sep 16, 2016

06:44 PM Incident #5036: Users Management portlet: exception during user removal: If the fix has been implemented, please link the release ticket and close this one. Please remember that the time an ... Pasquale Pagano
02:02 PM Incident #5036: Users Management portlet: exception during user removal: This case is also taken under account now Panagiota Koltsida
12:42 PM Incident #5036: Users Management portlet: exception during user removal: Yes, the user was added without membership requests, please take this into account when removing a user. Massimiliano Assante
12:39 PM Incident #5036 (In Progress): Users Management portlet: exception during user removal: @massimiliano.assante@isti.cnr.it could you please clarify if the user you have tried to remove had been added to thi... Panagiota Koltsida
05:22 PM Task #5000 (Feedback): Create new VM for hosting SmartExecutor service: The VM is ready, smartgear and the smartexecutor plugins installed. They answer on port 80, there's a reverse proxy b... Andrea Dell'Amico
03:08 PM Task #5000: Create new VM for hosting SmartExecutor service: hostname and Ip are going to be: smartexecutor1-d-d4s.d4science.org 146.48.122.204 Andrea Dell'Amico
02:14 PM Task #5000: Create new VM for hosting SmartExecutor service: yes, a smartExecutor with only the aggregatorPlugin
Path Url plugin:
http://maven.research-infrastructures.eu/nex... Alessandro Pieve
01:51 PM Task #5000: Create new VM for hosting SmartExecutor service: > Plugin for Smart Executor:
> <dependency>
> <groupId>org.gcube.accounting</groupId>
> <artifactId>accounting... Andrea Dell'Amico
01:50 PM Task #5000 (In Progress): Create new VM for hosting SmartExecutor service: It's going a smart executor but not a generic worker, right? So no generic worker nor R packages.
Andrea Dell'Amico
03:23 PM Incident #5046 (Closed): Blocked ports between the Dataminers and the Workspace: Now it works, thanks! Gianpaolo Coro
02:45 PM Incident #5046 (Feedback): Blocked ports between the Dataminers and the Workspace: Done. Andrea Dell'Amico
02:37 PM Incident #5046 (In Progress): Blocked ports between the Dataminers and the Workspace: Andrea Dell'Amico
02:29 PM Incident #5046 (Closed): Blocked ports between the Dataminers and the Workspace: We have noticed that the Workspace client uses RMI communication when uploading a file to a shared folder. Since RMI ... Gianpaolo Coro
11:24 AM Task #4961 (Closed): Change the favicon of sobigdata.d4science.org: the favicon is taken from their favicon on sobigdata.eu website Massimiliano Assante

Sep 15, 2016

06:48 PM Task #4959: Migrate NKUA nodes from Ecosystem to /gcube/preprod: Kostas Kakaletris wrote:
> The following VMs moved to Ubuntu 16.04 LTS, the scope was changed to /gcube/preprod, jav... Kostas Kakaletris
02:30 PM Task #5008 (Closed): Enable Infrastructure Gateway cluster on Production: Massimiliano Assante
12:56 PM Task #5034 (Feedback): Deploy Register VRE Users portlet on production gateways: The portlet was deployed on Sobigdata resource catalogue VRE, https://i-marine.d4science.org/group/resourcecatalogue/... Massimiliano Assante
10:50 AM Task #5034 (Closed): Deploy Register VRE Users portlet on production gateways: No server restart is needed. The portlet is needed for the resource catalogue VRE and what other VREs @leonardo.cande... Massimiliano Assante
12:49 PM Incident #5036 (Closed): Users Management portlet: exception during user removal: I selected a user, clicked on deleted selected without notification via email, the portlet popped up an error (but th... Massimiliano Assante

Sep 14, 2016

06:00 PM Task #5022 (Closed): Clustering Liferay’s Documents and Media Library in Production gateways: Andrea Dell'Amico
05:49 PM Task #5022 (Feedback): Clustering Liferay’s Documents and Media Library in Production gateways: NFS, for now. Steps:
* on dlibsan10.san.research-infrastructures.eu:
> * Installed `nfs-kernel-server`
> * Creat... Andrea Dell'Amico
02:50 PM Task #5022 (In Progress): Clustering Liferay’s Documents and Media Library in Production gateways: Massimiliano Assante
02:36 PM Task #5022 (Closed): Clustering Liferay’s Documents and Media Library in Production gateways: Although we don't use Liferay’s Documents and Media Library in gCube, this is used by Liferay internals for storing s... Massimiliano Assante
04:44 PM Task #4984: Create new VM to host new Resource Registry: Resource Registry is a service like smart-executor.
The current service is divided in two services IS-Collector and ... Luca Frosini
03:49 PM Task #4227 (Closed): Activate a VPN service to grant complete access to the servers network from outside: Andrea Dell'Amico
02:46 PM Task #5008 (In Progress): Enable Infrastructure Gateway cluster on Production: the Liferay’s Documents and Media Library should be "clustered" as well https://support.d4science.org/issues/5022 Massimiliano Assante

Sep 13, 2016

11:05 PM Incident #5013 (Closed): Zip files not compatible with Windows: the patch fixing the windows uncompress folder has been deployed in production, the other issue is tracked as a bug i... Massimiliano Assante
02:28 PM Incident #5013: Zip files not compatible with Windows: perhaps this post can help in solving the uncompress windows problem
http://superuser.com/questions/5155/how-to-cr... Massimiliano Assante
02:24 PM Incident #5013: Zip files not compatible with Windows: the issue is twofold, one is this one (which i think cannot be fixed very soon), apart from this issue the other issu... Massimiliano Assante
02:22 PM Incident #5013 (In Progress): Zip files not compatible with Windows: Valentina Marioli
02:19 PM Incident #5013: Zip files not compatible with Windows: This is what should never happen. Let's try do fix it immediately to at least demonstrate that we are able to fix iss... Pasquale Pagano
12:34 PM Incident #5013: Zip files not compatible with Windows: My feeling (just speculating) is that the compression of the folder could take longer than expected and that then an ... Massimiliano Assante
12:32 PM Incident #5013: Zip files not compatible with Windows: and another
~~~
016-09-13 10:31:29,902 INFO server.GWTWorkspaceServiceImpl [http-bio-9090-exec-247,getNameForSp... Massimiliano Assante
12:29 PM Incident #5013 (Closed): Zip files not compatible with Windows: We have been reported from participants of the ICES training course on Data-limited stock assessment that they are st... Massimiliano Assante
07:17 PM Task #5008 (Closed): Enable Infrastructure Gateway cluster on Production: Cluster composed by infra-gateway.d4s and infra-gateway1.d4s is now fully operational. Massimiliano Assante
06:00 PM Task #5008 (In Progress): Enable Infrastructure Gateway cluster on Production: together with this activity we are going to deploy a patch for fixing the unzip problem of workspace folder on Window... Massimiliano Assante
11:56 AM Task #5008: Enable Infrastructure Gateway cluster on Production: Yes, that's correct. The firewall rules are already active.
Andrea Dell'Amico
11:44 AM Task #5008: Enable Infrastructure Gateway cluster on Production: @andrea.dellamico@isti.cnr.it could you confirm the following:
* the network for Multicast Clustering Setting on ... Massimiliano Assante
11:41 AM Task #5008 (Closed): Enable Infrastructure Gateway cluster on Production: infra-gateway1.d4science.org will be added to the cluster currently composed by the infra-gateway.d4science.org node ... Massimiliano Assante
12:48 PM Task #4865: Installing data analysis machine to develop prototypes: Andrea Dell'Amico wrote:
> ~~~
> Connecting...
> Updating IS on scope /d4science.research-infrastructures.eu
> ec... Andrea Dell'Amico

Sep 12, 2016

05:58 PM Task #4987: Upgrade is-sweeper-se-plugin via Ansible: Is-Sweeper has been launched on /gcube/devNext (node 17). Waiting for clean smart-executor installation on node6 for ... Luca Frosini
05:40 PM Support #4998 (Closed): publishing the "Step_4_Vpa_Iccat_Bft_E_Report" algorithm in the production environment: The algorithm has been published both in the BFT-E and in the StockAssessment VREs. I have tested it with the default... Gianpaolo Coro
04:45 PM Support #4998 (In Progress): publishing the "Step_4_Vpa_Iccat_Bft_E_Report" algorithm in the production environment: Under installation Gianpaolo Coro
11:46 AM Support #4998 (Closed): publishing the "Step_4_Vpa_Iccat_Bft_E_Report" algorithm in the production environment: Could you please publish in the production environment the "Step_4_Vpa_Iccat_Bft_E_Report" algorithm which is current... TAHA IMZILEN
05:00 PM Task #5000 (Closed): Create new VM for hosting SmartExecutor service: The new VM should have the same
features as node06.d4science.org
and work on scope :devNext
Plugin for Smart Ex... Alessandro Pieve
04:48 PM Task #4379 (Closed): Update Tomcat7 servers (server.xml) to add cluster configuration: thanks, now the 2 preprod nodes can communicate correctly. Massimiliano Assante
04:37 PM Task #4379: Update Tomcat7 servers (server.xml) to add cluster configuration: The nodes need to communicate via RMI too. Now that traffic is permitted. I changed the firewall rules both on prepro... Andrea Dell'Amico
03:15 PM Task #4379 (In Progress): Update Tomcat7 servers (server.xml) to add cluster configuration: I did add the tomcat and Liferay cluster configurations on preprod1 and preprod2. However some firewall is blocking t... Massimiliano Assante
04:41 PM Task #4909 (Closed): Enable Gateway email parser to connect every minute to pop.isti.cnr.it, 995: we are not having problems with Gateway email parser to connect every 2 minutes to pop.isti.cnr.it, 995 instead of o... Massimiliano Assante
04:40 PM Task #4891 (Closed): Create new dev portal based on liferay 6.2 dev2.d4science.org: Massimiliano Assante
03:25 PM Task #4449 (Closed): Authorise OAuth2 Redirect URLs for social logins on all the Production Sites: >so i think what we are looking at is an application for each platform.
which is not what we need, as a consequenc... Massimiliano Assante
03:02 PM Task #4984: Create new VM to host new Resource Registry: I need smartgear container and the following service from snapshot
~~~
<dependency>
<groupId>org.gcube.informa... Luca Frosini
12:07 PM Task #4984: Create new VM to host new Resource Registry: Luca Frosini wrote:
> Same resources of the actual IC VM in dev.
What's the IC's hostname?
Which software need... Andrea Dell'Amico
11:34 AM Task #4984: Create new VM to host new Resource Registry: Same resources of the actual IC VM in dev. Luca Frosini
11:30 AM Task #4984: Create new VM to host new Resource Registry: please specify the characteristic of the VM. Thanks. Pasquale Pagano
12:46 PM Task #4865: Installing data analysis machine to develop prototypes: It seems that the only way to completely test this service is to have a new VRE in the production environment. Gianpaolo Coro

Sep 09, 2016

06:30 PM Task #4987 (Feedback): Upgrade is-sweeper-se-plugin via Ansible: The is-sweeper-plugin has been upgraded. @luca.frosini@isti.cnr.it please, could you activate the plugins? Roberto Cirillo
06:30 PM Task #4987 (In Progress): Upgrade is-sweeper-se-plugin via Ansible: Roberto Cirillo
05:00 PM Task #4987 (Closed): Upgrade is-sweeper-se-plugin via Ansible: The following nodes should be upgraded:
~~~
node6.d4science.org
node17.d4science.org
~~~
The new plugin vers... Roberto Cirillo
04:35 PM Task #2174: Dataminer and Statistical Manager packages: install.packages("igraph")
Gianpaolo Coro
03:15 PM Task #4888 (Feedback): Upgrade VRE Modeler Functionality Resource to include Data Miner and RStudio: I've successfully created a new VRE in development environment: /gcube/devsec/RMinerDev with RStudio and Dataminer se... Roberto Cirillo
03:02 PM Task #4888 (In Progress): Upgrade VRE Modeler Functionality Resource to include Data Miner and RStudio: Roberto Cirillo
03:14 PM Task #4865 (Feedback): Installing data analysis machine to develop prototypes: Andrea Dell'Amico
03:13 PM Task #4865: Installing data analysis machine to develop prototypes: The ldap authentication needed by the r-connector is in place. Against the new ldap server, so this has to be tested ... Andrea Dell'Amico
02:49 PM Task #4865: Installing data analysis machine to develop prototypes: Andrea Dell'Amico wrote:
> I think only the LDAP configuration for rstudio is missing. In the meantime could you che... Andrea Dell'Amico
01:28 PM Task #4865: Installing data analysis machine to develop prototypes: The smartgear configuration is
~~~
<container mode='online'>
<hostname>dataminer1-proto.d4science.org</hostn... Andrea Dell'Amico
01:27 PM Task #4865: Installing data analysis machine to develop prototypes: I think only the LDAP configuration for rstudio is missing. In the meantime could you check if the dataminer jars are... Andrea Dell'Amico
02:46 PM Task #1275 (Closed): Nagios check for our smtp relay server: Andrea Dell'Amico
02:45 PM Task #4917 (Closed): Update Dataminer Ansible installation: Andrea Dell'Amico
10:59 AM Task #3475 (In Progress): Add 2 OrientDB instances: We need to setup OrientDB cluster with the 3 VMs available Luca Frosini
10:57 AM Task #4984 (Closed): Create new VM to host new Resource Registry: Luca Frosini
10:24 AM Task #4889 (Closed): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: Roberto Cirillo

Sep 08, 2016

05:59 PM Support #4977 (Feedback): publishing the "parallelized_STEP1_VPA_ICCAT_BFT_E_Retros" algorithm in the production environment: Gianpaolo Coro
05:58 PM Support #4977: publishing the "parallelized_STEP1_VPA_ICCAT_BFT_E_Retros" algorithm in the production environment: I have installed the algorithm in the production environment. However, the one algorithm downloaded from the link you... Gianpaolo Coro
12:22 PM Support #4977 (Closed): publishing the "parallelized_STEP1_VPA_ICCAT_BFT_E_Retros" algorithm in the production environment: Could you please publish in the production environment the "parallelized_STEP1_VPA_ICCAT_BFT_E_Retros" algorithm wh... TAHA IMZILEN
05:43 PM Task #4865: Installing data analysis machine to develop prototypes: Thanks. Andrea Dell'Amico
05:36 PM Task #4865: Installing data analysis machine to develop prototypes: you can put both contexts in the container.xml with the same list of scopes. Lucio Lelii
05:26 PM Task #4865: Installing data analysis machine to develop prototypes: @lucio.lelii@isti.cnr.it @roberto.cirillo@isti.cnr.it I need your help with the smartgears contexts configuration. Th... Andrea Dell'Amico
11:40 AM Task #4865 (In Progress): Installing data analysis machine to develop prototypes: Andrea Dell'Amico
03:05 PM Task #4842 (In Progress): Make the ldap configuration on rstudio(-dev).d4science.org point to ldap.d4science.org: Andrea Dell'Amico
12:24 PM Task #2353 (Closed): upgrade all devsec node with components released in 3.10: Roberto Cirillo
12:21 PM Task #4733 (Closed): Remove node74.d4science.org from smart-executor ganglia cluster: Roberto Cirillo
12:21 PM Task #4733 (In Progress): Remove node74.d4science.org from smart-executor ganglia cluster: Roberto Cirillo
12:14 PM Task #4917 (Feedback): Update Dataminer Ansible installation: The playbook has been modified.
Andrea Dell'Amico
11:41 AM Task #4917 (In Progress): Update Dataminer Ansible installation: Andrea Dell'Amico
12:03 PM Task #4970 (Closed): create a new node for dev infrastructure: collector-dev.d4science.org created with the gcube1 user. Tommaso Piccioli
10:44 AM Task #4970 (Closed): create a new node for dev infrastructure: create a new node for dev infrastructure copying the user gcube1 from collector-pre.d4science.org Lucio Lelii
11:44 AM Support #4967 (Closed): scope filter on pre-production infrastructure monitoring is not working correctly: Roberto Cirillo
11:43 AM Support #4967 (In Progress): scope filter on pre-production infrastructure monitoring is not working correctly: The registration request was blocked in the registry queue. After the restart of the registry service, the container ... Roberto Cirillo

Sep 07, 2016

10:32 PM Task #4231 (Closed): Better authentication system for the openvpn server: The certificates authentication is enabled too. Andrea Dell'Amico
05:28 PM Task #4231: Better authentication system for the openvpn server: We are now authenticating against the ldap server. An external perl script is doing the checks against the ldap serve... Andrea Dell'Amico
02:57 PM Task #4231 (In Progress): Better authentication system for the openvpn server: Update: the openldap-auth-ldap package is broken, openvpn crashes when the plugin is used. Need to find another way.
Andrea Dell'Amico
06:14 PM Support #4967: scope filter on pre-production infrastructure monitoring is not working correctly: Checking farther I noticed that in "GCoreEndpoint->Index" list, when I select from available scopes the "/gcube/prepr... Kostas Kakaletris
04:50 PM Support #4967 (Closed): scope filter on pre-production infrastructure monitoring is not working correctly: On pre-production portal
https://pre.d4science.org/infrastructure-monitor
In hosting nodes, when I select from av... Kostas Kakaletris
05:53 PM Task #4959: Migrate NKUA nodes from Ecosystem to /gcube/preprod: The following VMs moved to Ubuntu 16.04 LTS, the scope was changed to /gcube/preprod, java was upgraded to oracle-jav... Kostas Kakaletris
11:55 AM Task #4959 (Closed): Migrate NKUA nodes from Ecosystem to /gcube/preprod: In order to complete the migration from the old preproduction environment(Ecosystem) to the new one (/gcube/preprod) ... Roberto Cirillo
12:58 PM Task #4961 (Closed): Change the favicon of sobigdata.d4science.org: The favicon of this site is not correct (it is the old logo of SoBigData) Leonardo Candela

Sep 06, 2016

01:10 PM Task #4891: Create new dev portal based on liferay 6.2 dev2.d4science.org: Hm. Something changed with the ansible `user` module, now if a password is not specified the users are created `locke... Andrea Dell'Amico
01:07 PM Task #4891: Create new dev portal based on liferay 6.2 dev2.d4science.org: I cannot login as life user
nb-assante:~ massi$ ssh life@dev3.d4science.org
Permission denied (publickey). Massimiliano Assante
12:55 PM Task #4889 (Feedback): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: All dataminer services have been added to the ICCAT_BFT-E VRE via ansible Roberto Cirillo
12:24 PM Task #4879: Re-harvesting of FAO Geonetwork products: perfect, thanks Emmanuel Blondel
12:17 PM Task #4879: Re-harvesting of FAO Geonetwork products: What are the products "published" by each catalogue is a matter of configuration, each catalogue should be oriented t... Leonardo Candela
11:20 AM Task #4879: Re-harvesting of FAO Geonetwork products: Thanks, i understand this diff, but what are we supposed to have in the i-Marine portal https://i-marine.d4science.or... Emmanuel Blondel
11:01 AM Task #4879: Re-harvesting of FAO Geonetwork products: Hi Emmanuel,
FAO products with its Geonetwork Harvester have been moved in the BB catalogue: https://ckan-bb.d4scien... Francesco Mangiacrapa
11:00 AM Incident #4938 (Closed): Tuna Atlas / RStudio/ Does not open: Tuna Atlas / RStudio is now available Massimiliano Assante
09:26 AM Incident #4938 (Closed): Tuna Atlas / RStudio/ Does not open: R studio in TA does not open today.
Also the message "If RStudio does not open automatically, please click here" doe... Anton Ellenbroek
10:52 AM Task #4919: Enhance raster data metadata for the data catalogue: Other layers should be added using the "VLIZ" keyword. These belong to the PlanetOS (once MarineExplore) catalogue. Gianpaolo Coro

Sep 05, 2016

07:25 PM Task #4865: Installing data analysis machine to develop prototypes: I have some questions:
* rstudio server needs to authenticate in the same way of rstudio.d4science.org?
* If so, ... Andrea Dell'Amico
07:12 PM Task #4865: Installing data analysis machine to develop prototypes: dataminer1-proto.d4science.org created, to be configured as dataminer.
Initial resources are 40 GB disk, 8 cpu and... Tommaso Piccioli
06:47 PM Task #4865: Installing data analysis machine to develop prototypes: Please @tommaso.piccioli@isti.cnr.it start creating a new VM. Then @andrea.dellamico@isti.cnr.it will run the ansible... Pasquale Pagano
05:45 PM Task #4865: Installing data analysis machine to develop prototypes: Do you have updates on this ticket? Please this is a requirement of the BlueBRIDGE project. Gianpaolo Coro
07:04 PM Task #4891 (Feedback): Create new dev portal based on liferay 6.2 dev2.d4science.org: Andrea Dell'Amico
07:04 PM Task #4891 (In Progress): Create new dev portal based on liferay 6.2 dev2.d4science.org: dev3.d4science.org is ready. The DB credentials are the same of the dev2 ones for the `infra_dev_db` db .
Andrea Dell'Amico
04:56 PM Task #4891: Create new dev portal based on liferay 6.2 dev2.d4science.org: dev.d4science.org cannot be dismissed yet, in the meantime we need another dev instance (dev3.d4science.org) similar ... Massimiliano Assante
04:54 PM Task #4891: Create new dev portal based on liferay 6.2 dev2.d4science.org: new VM name: dev3.d4science.org Massimiliano Assante
07:03 PM Task #4879 (In Progress): Re-harvesting of FAO Geonetwork products: Pasquale Pagano
06:23 PM Task #4879: Re-harvesting of FAO Geonetwork products: Dont' know why but now FAO products are no longer available in the data catalogue, CKAN based, not the CSW one. I'm r... Emmanuel Blondel
06:17 PM Task #4879 (Resolved): Re-harvesting of FAO Geonetwork products: I suppose we can close this one. Please, re open it if you need to. Fabio Sinibaldi
04:53 PM Support #4900 (Closed): Adding new user accounts: Massimiliano Assante
04:06 PM Task #4919 (Feedback): Enhance raster data metadata for the data catalogue: Gianpaolo Coro
04:05 PM Task #4919 (In Progress): Enhance raster data metadata for the data catalogue: Francesco @francesco.mangiacrapa@isti.cnr.it , in order to go forward I need a CKAN harvesting run in the dev. enviro... Gianpaolo Coro
03:36 PM Incident #4932 (Closed): The redmine page does not appear on services.d4science.org under the EFG and EGIengage VREs: Massimiliano Assante
03:27 PM Incident #4932 (In Progress): The redmine page does not appear on services.d4science.org under the EFG and EGIengage VREs: my fault, fixing in a minute Massimiliano Assante
03:26 PM Incident #4932 (Closed): The redmine page does not appear on services.d4science.org under the EFG and EGIengage VREs: https://services.d4science.org/group/efg/issue-tracker
and
https://services.d4science.org/group/egiengage/acti... Andrea Dell'Amico
12:56 PM Support #4922: AquaMaps / data not loading: Hi, I checked and the service had "troubles" again.
It's working again (I've tested all functionalities from species... Fabio Sinibaldi
11:12 AM Support #4922: AquaMaps / data not loading: I now receive an error when adding user selected species in the Species "selection".
Did you really check everythi... Anton Ellenbroek
11:38 AM Incident #4926 (Closed): Auth service not working on newly created VREs (end of august): The issue has been fixed, it was (probably) caused by this bug #4927 in the auth service Massimiliano Assante
11:37 AM Incident #4926 (In Progress): Auth service not working on newly created VREs (end of august): Massimiliano Assante
11:27 AM Incident #4926 (Closed): Auth service not working on newly created VREs (end of august): The auth service stopped working on the following VREs:
* gCubeApps/ICES_DALSA
* gCubeApps/ICES_DASC
* gCubeApps... Massimiliano Assante

Sep 02, 2016

05:46 PM Support #4922 (Feedback): AquaMaps / data not loading: The service was unreachable, now every thing's back to normal. We'll be investigating on the cause of this behavior. Fabio Sinibaldi
05:36 PM Support #4922 (In Progress): AquaMaps / data not loading: Fabio Sinibaldi
04:58 PM Support #4922 (Closed): AquaMaps / data not loading: In https://i-marine.d4science.org/group/aquamaps/maps-generation I do not see any data Anton Ellenbroek
11:47 AM Task #4915 (Closed): Registry- sbd: enable automatically restart: In d4science-ghn-cluster/group_vars/ghn_sobigdata/main.yml , I've also added the following variable:
~~~
gcoreboo... Roberto Cirillo
11:30 AM Task #4915 (In Progress): Registry- sbd: enable automatically restart: Roberto Cirillo
11:39 AM Task #4919 (Closed): Enhance raster data metadata for the data catalogue: Raster data meta information should be updated with proper modifications to the ISO online-resources fields. Gianpaolo Coro

Sep 01, 2016

08:00 PM Support #4871: Making public some selected pages of Redmine Wiki: On the OpenAire redmine instance we worked around a similar need creating a public (sub)project that only hosts a wik... Andrea Dell'Amico
07:40 PM Task #4915: Registry- sbd: enable automatically restart: I see that `d4science-ghn-cluster/group_vars/ghn_sobigdata/main.yml` has
~~~
gcoreboot_enabled: False
~~~
Do... Andrea Dell'Amico
01:03 PM Task #4915 (Closed): Registry- sbd: enable automatically restart: I've notice during the last shutdown that the following container doesn't restart automatically :
~~~
registry-sb... Roberto Cirillo
06:35 PM Task #4917: Update Dataminer Ansible installation: A periodic run is not necessary. This will be used only at installation time. Indeed, no maven activity is required o... Gianpaolo Coro
06:24 PM Task #4917: Update Dataminer Ansible installation: It's a subversion repository, so it's easy if the `algorithms` directory contains jars only. It can also be run regul... Andrea Dell'Amico
03:12 PM Task #4917 (Closed): Update Dataminer Ansible installation: Is it possible to add the following logic to the dataminer installation scripts?
Copy all the JARs files from the ... Gianpaolo Coro
05:14 PM Support #4900: Adding new user accounts: Dear @sheena.giess@gmail.com were you able to add new user accounts then? Massimiliano Assante
03:56 PM Upgrade #4105 (Completed): enabling services for /d4s: done, service map for /d4s:
<Service name ="ISICAllQueryPT" endpoint ="http://d4science1.esl.eng.it/wsrf/s... Daniele Pavia
03:55 PM Upgrade #4105 (In Progress): enabling services for /d4s: Daniele Pavia
03:55 PM Upgrade #4105 (Planned): enabling services for /d4s: enablers are up and running @ eng testing infrastructure for /d4s and /d4s/testing, infra status available @ http://d... Daniele Pavia
03:50 PM Task #1795 (Closed): new test portal @ENG: testing portal is up and running and available @ http://d4science4.esl.eng.it/web/guest Daniele Pavia
01:31 PM Task #4765 (Closed): Renew the wiki certificates: We now have letsencrypt certificates. The covered hostnames are:
~~~
wiki.d4science.org
wiki.gcube-system.org
... Andrea Dell'Amico
01:01 PM Incident #4914 (Closed): Infrastructure Gateway VM not reachable!: Massimiliano Assante
12:24 PM Incident #4914 (In Progress): Infrastructure Gateway VM not reachable!: Massimiliano Assante
12:16 PM Incident #4914 (Closed): Infrastructure Gateway VM not reachable!: nb-assante:~ massi$ ssh life@infra-gateway.d4science.org
ssh: Could not resolve hostname infra-gateway.d4science.org... Massimiliano Assante
11:11 AM Task #2174: Dataminer and Statistical Manager packages: install.packages("plotrix") Gianpaolo Coro

Aug 31, 2016

07:56 PM Task #4879: Re-harvesting of FAO Geonetwork products: The catalog is a new product released in August. There is not yet a scheduled harvesting so far. We run the harvester... Pasquale Pagano
04:04 PM Task #4879: Re-harvesting of FAO Geonetwork products: Thanks for your feedback on validation issues. FYI, these has been fixed, as follows:
* 4c9e8750-dbba-11dc-9d70-0017... Emmanuel Blondel
03:29 PM Task #4879: Re-harvesting of FAO Geonetwork products: Re-Harvesting of GeoNetwork for FAO Layers on D4science Data Catalogue has finished. You can see new layers here:
ht... Francesco Mangiacrapa
10:37 AM Task #4879: Re-harvesting of FAO Geonetwork products: Well, simply put : the data catalog performs harvesting of GeoNetwork information, and until that the catalog content... Fabio Sinibaldi
06:20 PM Incident #4862 (Closed): Gateway email parser cannot connect to pop.isti.cnr.it, 995 due to ConnectException: I'm closing the incident as we have a temporary fix, will create a task to work on the ConnectException issue if poll... Massimiliano Assante
06:15 PM Incident #4862: Gateway email parser cannot connect to pop.isti.cnr.it, 995 due to ConnectException: In the next release the Email parser allows not only to change the polling interval but also to exit the process by s... Massimiliano Assante
06:20 PM Task #4909 (Closed): Enable Gateway email parser to connect every minute to pop.isti.cnr.it, 995: Runs every 5 minutes now, configurable by editing the property (pop3pollinginminutes) on CATALINA_HOME/conf/gcube-dat... Massimiliano Assante
04:32 PM Support #4904 (Closed): download from social facility: Massimiliano Assante
04:22 PM Support #4904: download from social facility: checked, now works fine!
Thanks. Eugenio Trumpy
03:17 PM Support #4904 (Feedback): download from social facility: Roberto Cirillo
03:10 PM Support #4904: download from social facility: It seems to be a download problem that happens when the scope is not correctly set in the uri-resolver webapp. I'm go... Roberto Cirillo
02:52 PM Support #4904 (Closed): download from social facility: Eugenio the problem should have been fixed. Please try again and let us know. Massimiliano Assante
02:39 PM Support #4904 (In Progress): download from social facility: we're investigating the problem Massimiliano Assante
11:17 AM Support #4904: download from social facility: yes, this page (DESCRAMBLE VRE). Eugenio Trumpy
10:42 AM Support #4904: download from social facility: You mean in this page @e.trumpy@igg.cnr.it ? https://descramble.d4science.org/group/descramble or on EGIP? Massimiliano Assante
10:36 AM Support #4904: download from social facility: it seems that since 2016, up today, the files uploaded on the wall are downloadable.
Before 2016 are not. Eugenio Trumpy
10:31 AM Support #4904 (Closed): download from social facility: images uploaded on workspace are no longer downloadable Eugenio Trumpy
02:26 PM Task #2174: Dataminer and Statistical Manager packages: install.packages("earth") Gianpaolo Coro
11:20 AM Task #4449: Authorise OAuth2 Redirect URLs for social logins on all the Production Sites: @massimiliano.assante@isti.cnr.it as far as i know OAUTH2 **requires**, that the redirect_uri specified in the initia... Michalis Nikolopoulos
10:26 AM Task #4449: Authorise OAuth2 Redirect URLs for social logins on all the Production Sites: @mnikolopoulos@cite.gr any update on this? Massimiliano Assante
10:26 AM Upgrade #4319 (Completed): D4Science Infrastructure Upgrade to gCube 4.0: Massimiliano Assante

Aug 30, 2016

07:50 PM Incident #4862: Gateway email parser cannot connect to pop.isti.cnr.it, 995 due to ConnectException: runs every 5 minutes now, configurable by editing the property (pop3pollinginminutes) on CATALINA_HOME/conf/gcube-dat... Massimiliano Assante
06:23 PM Incident #4862: Gateway email parser cannot connect to pop.isti.cnr.it, 995 due to ConnectException: patch is ready, going to deploy it around 19 today. (although it won't solve the problem completely) Massimiliano Assante
02:39 PM Incident #4862: Gateway email parser cannot connect to pop.isti.cnr.it, 995 due to ConnectException: As we are not able to contact the responsible for the pop isti server, I'm going to implement a temporary fix on the ... Massimiliano Assante
06:38 PM Task #4879: Re-harvesting of FAO Geonetwork products: it's ok in Geoexplorer, but not in the data catalogue which i was looking primarily (due to its search capacities). C... Emmanuel Blondel
04:50 PM Task #4879 (Feedback): Re-harvesting of FAO Geonetwork products: Harvesting seems to be completed. Can you please check if every expected metadata has been imported by using geoexplo... Fabio Sinibaldi
03:43 PM Task #4879: Re-harvesting of FAO Geonetwork products: According to GeoNetwork documentation "A public metadata is a metadata that has the view privilege for the group name... Fabio Sinibaldi
03:37 PM Task #4879: Re-harvesting of FAO Geonetwork products: What VRE/VO visibility is associated to the all group? All the root/VO/VRE levels? Gianpaolo Coro
03:35 PM Task #4879 (In Progress): Re-harvesting of FAO Geonetwork products: Fabio Sinibaldi
03:32 PM Task #4879: Re-harvesting of FAO Geonetwork products: Hi,
well as usual the harvesting of fao GN metadata is set for the reserved group All (rights "view" and "interactiv... Fabio Sinibaldi
03:20 PM Task #4879: Re-harvesting of FAO Geonetwork products: As far as I have understood, with the new management of GeoNetwork, with dynamic users and groups, it is impossible f... Gianpaolo Coro
03:13 PM Task #4879: Re-harvesting of FAO Geonetwork products: @gianpaolo.coro@isti.cnr.it can you clarify the harvesting rules and proceed with the update? Thanks. Pasquale Pagano
05:37 PM Support #4900 (Feedback): Adding new user accounts: Dear Sheena,
there is an Invite Member widget at the bottom of the Parthenos VRE Home: https://services.d4science.or... Massimiliano Assante
02:18 PM Support #4900 (Closed): Adding new user accounts: I can't see how to add new users since the interface changed. Under user management, it is possible to list and delet... Sheena Bassett
05:19 PM Task #4893 (Closed): Workspace enhancements: manage session expired during upload: This enhancement has been implemented. When file/s upload starting if session is expired the upload will be aborted a... Francesco Mangiacrapa
10:25 AM Task #4893 (In Progress): Workspace enhancements: manage session expired during upload: Francesco Mangiacrapa
03:27 PM Task #4889 (In Progress): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: Ok. It's need also to add the new VRE in the dataminer ansible playbook Roberto Cirillo
02:52 PM Task #4889: Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: I have realized that this is not sufficient, since also all the Dataminer services must be assigned to the VRE by mod... Gianpaolo Coro
02:45 PM Task #4889 (Feedback): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: All the infrastructure resources have been added Roberto Cirillo
01:08 PM Task #4889 (In Progress): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: @roberto.cirillo@isti.cnr.it I have added the Dataminers cluster and the algorithms, but the VRE needs the infrastruc... Gianpaolo Coro
01:03 PM Task #4889 (Closed): Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: Pasquale Pagano
01:00 PM Task #4889: Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: Done. Gianpaolo Coro
12:43 PM Task #4889: Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: Can you add also the ICCAT algorithms? Pasquale Pagano
12:39 PM Task #4889: Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: The resources are necessary and should be added by Roberto based on his Wiki guide. The correct cluster for this VRE ... Gianpaolo Coro
12:29 PM Task #4889: Deploy DataMiner service on new VRE gCubeApps/ICCAT_BFT-E: More than deploy I think we need to add the right data miner cluster to the VRE. @gianpaolo.coro@isti.cnr.it can you ... Pasquale Pagano

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