Activity
From Nov 22, 2018 to Dec 21, 2018
Dec 21, 2018
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04:52 PM ISTI Open Access Feature #11601 (Feedback): Migrate the OpenPortal services to production machines
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04:26 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- I thought it would create issues if the field name is the same.
Since it does not, then use ***database_sources***. ... -
03:35 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Yannis Marketakis wrote:
> So in that case, the field name should be different. Right?
It could. But if it is eas... -
03:10 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- So in that case, the field name should be different. Right?
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03:02 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Yannis Marketakis wrote:
> @@luca.frosini@isti.cnr.it we already have this feature when publishing records in the GR...
Dec 20, 2018
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07:53 PM ISTI Open Access Feature #13078 (Closed): Put the three openportal servers under backup
The hosts data is listed in the parent task.-
07:48 PM ISTI Open Access Bug #12670 (Closed): Memory problem
- Let's see what happens on the new service, where the PHP frontend runs into its own VM.
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07:45 PM ISTI Open Access Feature #12667 (Closed): New joomla portal installation (BETA)
- beta is going to be hosted on the same server that hosts production.
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07:21 PM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines
- dnet-openportal.isti.cnr.it has been deployed. The dnet application will answer at https://dnet.openportal.isti.cnr.i...
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03:32 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- @roberto.cirillo@isti.cnr.it this ticket has been closed, follow the discussion in the associated Task. The problem i...
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03:18 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- The problem here was due to an incompatibility between jdk 8 build 161 and registry service. In order to fix this inc...
Dec 19, 2018
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06:30 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- I think the issue is in the fact that the Generic Workers do not find the algorithm in the private category and they ...
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06:13 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- I was talking about the publication on the IS done at every execution of the addAlgorithm, this is what Giancarlo is ...
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03:00 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Lucio Lelii wrote:
> My fear is that what is now modifying Giancarlo is not a bug but a choice, because it's impossi... -
02:55 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- My fear is that what is now modifying Giancarlo is not a bug but a choice, because it's impossible we didn't notice i...
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12:41 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- @roberto.cirillo@isti.cnr.it , Yes the same component is also present in all the dataminer*-proto instances.
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12:34 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- @roberto.cirillo@isti.cnr.it I have already answered above this depends on the fact that that code does not behave c...
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11:21 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Just two comments:
If the problem is in the dataminer-algorithms-importer, why only the gw proto instances have remo... -
11:13 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Hi @massimiliano.assante@isti.cnr.it , it is part of the code that was written by Gianpaolo and Lucio to install the ...
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11:09 AM D4Science Infrastructure Incident #13029 (Closed): Private algorithm disappeared in SoBigDataLab VRE
- I close this ticket
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11:04 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Giancarlo Panichi wrote:
> The answer is that the dataniner*-gw-proto are also dataminer in the proto cluster, so th... -
10:55 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- The answer is that the dataniner*-gw-proto are also dataminer in the proto cluster, so they also execute the java cod...
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10:25 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- As shown in the registry logs, the resource has been deleted several times by someone:
~~~
2018-12-18 18:28:42,18... -
10:11 AM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Giancarlo Panichi wrote:
> After investigating in depth I think there are two problems:
>
> 1. The code of addAlg... -
02:51 PM D4Science Infrastructure Incident #13066 (Closed): DataMiner algorithm on FARM/PerformFISH-KPIs not working
- Yes it works now, i'll relate the ticket to the other one talking about algorithms "desaparecidos"
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02:46 PM D4Science Infrastructure Incident #13066 (Feedback): DataMiner algorithm on FARM/PerformFISH-KPIs not working
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02:45 PM D4Science Infrastructure Incident #13066 (In Progress): DataMiner algorithm on FARM/PerformFISH-KPIs not working
- After the re-installation it is working. Could you check please?
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02:38 PM D4Science Infrastructure Incident #13066: DataMiner algorithm on FARM/PerformFISH-KPIs not working
- Gianpaolo Coro wrote:
> The error indicates that the algorithm is no more installed on the production DataMiners. I'... -
01:22 PM D4Science Infrastructure Incident #13066: DataMiner algorithm on FARM/PerformFISH-KPIs not working
- The error indicates that the algorithm is no more installed on the production DataMiners. I'm going to reinstall it. ...
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12:47 PM D4Science Infrastructure Incident #13066: DataMiner algorithm on FARM/PerformFISH-KPIs not working
- Clearly this reflects on the PerformFISH KPI Form Submission app as well
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12:45 PM D4Science Infrastructure Incident #13066: DataMiner algorithm on FARM/PerformFISH-KPIs not working
- Adding @roberto.cirillo@isti.cnr.it to check if it's a misconfiguration
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12:44 PM D4Science Infrastructure Incident #13066 (Closed): DataMiner algorithm on FARM/PerformFISH-KPIs not working
- The error is: the computation 49d696e5-4809-461c-910d-f1457064da97 of Performfish Data Validator V2 has failed.
java... -
12:50 PM D4Science Infrastructure Task #13054 (Closed): Infrastructure-monitor: The new VO D4OS is not shown anymore
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11:59 AM D4Science Infrastructure Task #13054 (In Progress): Infrastructure-monitor: The new VO D4OS is not shown anymore
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12:14 PM D4Science Infrastructure Task #12384 (Closed): Provide a cronjob for restarting VREModeler service
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12:13 PM D4Science Infrastructure Task #12799: Memory problems on ckan-d4s1.d4science.org
- @tommaso.piccioli@isti.cnr.it @francesco.mangiacrapa@isti.cnr.it was the RAM amount increased? if not, let's do that.
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11:43 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- @@luca.frosini@isti.cnr.it we already have this feature when publishing records in the GRSF_Admin (in particular when...
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11:09 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- I Understand this is an additional information added in the json of the grsf record, so at worst it won't be used in ...
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11:04 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- The solution is ok for me.
Please take into account that this behaviour will occur also on GRSF_Admin VREfor any re...
Dec 18, 2018
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09:02 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- After investigating in depth I think there are two problems:
1. The code of addAlgorithm that run on the DataMiner... -
06:37 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- So, here's the thing. It disappeared again 5 minutes ago when I triggered an algorithm deployment via the DM Deployer...
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04:12 PM D4Science Infrastructure Incident #13029 (In Progress): Private algorithm disappeared in SoBigDataLab VRE
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04:12 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Si I was told to re publish again the SortWords algorithm in the SoBigData Lab VRE and to paste the resource UID in t...
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03:00 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Just to add that last Thursday (13/12) I republished the algorithm sortWords again in SoBigDataLab (see the email I r...
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11:09 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- I am OK with that.
Technically speaking this means that we should include the database sources in the JSON serial... -
10:56 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Thanks to all, appreciated. I discussed the matter also with Anton and I showed him also the citation aspect. We thin...
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09:43 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Thanks for your answers Lino. See some comments below:
Pasquale Pagano wrote:
> Waiting for @aureliano.gentile@fa... -
09:33 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Waiting for @aureliano.gentile@fao.org, please see below my personal opinion.
> The alternatives I see are:
>
... -
09:11 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- I do not see any technical difficulties here. It is clearly a matter of decision.
I would expect that colleagues ...
Dec 17, 2018
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07:11 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- This issue has to be analyzed by FORTH. As reported, GRSF misses an information that is key for its users. This infor...
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03:00 PM D4Science Infrastructure Incident #13053: DataMiner does not show computations
- There seems to be a problem with the folders shared with the old HL. @lucio.lelii@isti.cnr.it please, can you invest...
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01:29 PM D4Science Infrastructure Incident #13053 (Closed): DataMiner does not show computations
- The user marco.palma does not retrieve any computation from the DataMiner interface. The check the computations page ...
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02:51 PM D4Science Infrastructure Task #13054 (Closed): Infrastructure-monitor: The new VO D4OS is not shown anymore
- The new VO D4OS is missing on every infrastructure-monitor.
Please could you re enable it on Production and PreProdu... -
11:40 AM D4Science Infrastructure Incident #13051: Unable to add Generic Resourec to Scope
- you are welcome
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11:11 AM D4Science Infrastructure Incident #13051: Unable to add Generic Resourec to Scope
- Thank you
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11:07 AM D4Science Infrastructure Incident #13051 (Closed): Unable to add Generic Resourec to Scope
- Added. The problem was due to the ResourceManager service.
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11:01 AM D4Science Infrastructure Incident #13051 (In Progress): Unable to add Generic Resourec to Scope
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09:10 AM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines
- > * mysql should only on the backend server
mysql is used by d-net and by the portals; if you prefer a single instal...
Dec 15, 2018
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10:41 AM D4Science Infrastructure Support #13052 (Closed): Please allow postgres database connection to gcat service
- This task was already done. I created a ticket for future references
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10:38 AM D4Science Infrastructure Support #13052 (Closed): Please allow postgres database connection to gcat service
- The database is ckan_prod_aginfra which is hosted on ckan-pg-d4s.d4science.org.
The gcat service is hosted on gcat.d...
Dec 14, 2018
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06:38 PM D4Science Infrastructure Incident #13051 (Closed): Unable to add Generic Resourec to Scope
- I'm not able to add the resource with id '23d827cd-ba8e-4d8c-9ab4-6303bdb7d1db' to the scope '/d4science.research-inf...
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05:34 PM D4Science Infrastructure Task #13050 (Closed): Try to improve CKAN 2.6.X performance by adding fixes released for CKAN 2.7.X
- We know that the CKAN system 2.6.X (currently installed for the gCube Catalogues) degrades its performance after a ce...
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05:22 PM ISTI Open Access Feature #11601 (In Progress): Migrate the OpenPortal services to production machines
- Michele Artini wrote:
>
> 1. backend.openportal.isti.cnr.it (solr 5.5.x + mongo + mysql)): 4 cpus, 16GB Ram, ~64G... -
02:36 PM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines
- Vm created (and now running):
dnet-openportal.isti.cnr.it (146.48.87.206), alias dnet.openportal.isti.cnr.it
... -
04:41 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Hi all,
The field ***refers_to*** is used to automatically create the field ***Database Source*** and to add the G... -
02:08 PM StocksAndFisheriesKB Bug #13026 (Closed): Approved records loose some information and data
- I made an automatic procedure to check the records which fixed the ones with missing information.
Everything should ... -
12:24 PM D4Science Infrastructure Task #13043 (Closed): Provide a cronjob for removing old access.log files on IS-Registry instances
- cronjob added to all the Registry instances.
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12:10 PM D4Science Infrastructure Task #13043 (In Progress): Provide a cronjob for removing old access.log files on IS-Registry instances
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11:50 AM D4Science Infrastructure Task #13043 (Closed): Provide a cronjob for removing old access.log files on IS-Registry instances
Dec 13, 2018
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05:48 PM D4Science Infrastructure Task #12527: Undeploy FARM/AquaMaps VRE
- The Aquamaps VRE has been dismissed and all the related resources cleaned. I'm going to assign this ticket to @lucio....
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04:31 PM D4Science Infrastructure Upgrade #13039 (Completed): Infra-gateways fourth update to gCube 4.13.0
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03:42 PM D4Science Infrastructure Upgrade #13039 (In Progress): Infra-gateways fourth update to gCube 4.13.0
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02:49 PM D4Science Infrastructure Upgrade #13039 (Planned): Infra-gateways fourth update to gCube 4.13.0
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02:47 PM D4Science Infrastructure Upgrade #13039 (Completed): Infra-gateways fourth update to gCube 4.13.0
- This update fixes the Incident #13013, it contains the Messages portlet only:
* messages-2.2.0-4.13.1-174717
On...
Dec 12, 2018
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05:52 PM D4Science Infrastructure Task #9115 (Closed): VRE Modeler fails to undeploy VREs under gCubeApps
- Resources cleaned
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05:02 PM D4Science Infrastructure Task #9115 (In Progress): VRE Modeler fails to undeploy VREs under gCubeApps
- I'm going to run a script in order to clean all the ServiceEndpoints and GenericResources under gCubeApps.
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05:38 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Thanks, sorry but I think there is a misunderstanding, that list is for GRSF records and those groups should be there...
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05:26 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- @aureliano.gentile@fao.org about the point 1.
I'm going to remove the legacy groups from GRSF Catalogue (they will b... -
05:37 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Giancarlo Panichi wrote:
> The problem is that there is no resource on the IS and it is also missing the SecondaryTy... -
04:36 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- The problem is that there is no resource on the IS and it is also missing the SecondaryType:
~~~
<SecondaryTyp... -
04:32 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Look this morning I have not republished in RPrototypingLab for sure (and it says .... Simple method that sort words ...
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04:18 PM D4Science Infrastructure Incident #13029: Private algorithm disappeared in SoBigDataLab VRE
- Looking on svn it seems that SAI and DMPoolManager have correctly published the algorithm on svn, and for what I see ...
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03:24 PM D4Science Infrastructure Incident #13029 (Closed): Private algorithm disappeared in SoBigDataLab VRE
- On Monday 10 Dec, I could see my method named SortWords (Python Examples category), also took the screenshot attached...
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04:28 PM D4Science Infrastructure Task #12252 (Closed): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- Massimiliano Assante wrote:
> > > There is a confusion here Roberto, look at the VO!, at the time of the ticket (Jun... -
04:07 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- > > There is a confusion here Roberto, look at the VO!, at the time of the ticket (June 2017) we moved the 3 VREs abo...
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04:01 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- Massimiliano Assante wrote:
> Roberto Cirillo wrote:
> > Roberto Cirillo wrote:
> > > This is the list of all the ... -
03:52 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- Roberto Cirillo wrote:
> Roberto Cirillo wrote:
> > This is the list of all the VREs that are present only on infra... -
03:45 PM D4Science Infrastructure Task #12252 (Feedback): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- iMarineBoardVRE is back.
Finally, all the VREs have been successfully restored. I'm going to re assign this ticket ... -
03:21 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- iLKNAK_Aquaculture restored
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02:38 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- SustainableBlueEconomy restored
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12:35 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- STRATOS_AQUACULTURES restored
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12:13 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- NHREUS_Aquaculture restored
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11:21 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- MARKELLOS_Aquaculture is back
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04:00 PM StocksAndFisheriesKB Bug #13026: Approved records loose some information and data
- We will fix the issue asap. @luca.frosini@isti.cnr.it is working to fix it
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12:37 PM StocksAndFisheriesKB Bug #13026 (In Progress): Approved records loose some information and data
- The data published in the two VREs are exactly the same. You will see that Catches for example are included (under St...
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10:33 AM StocksAndFisheriesKB Bug #13026 (Closed): Approved records loose some information and data
- In example
Sebastes mentella East Greenland (Subarea 27.14) Iceland Grounds (Division 27.5.a)
by comparing the r... -
10:11 AM D4Science Infrastructure Task #11522 (Closed): Provide a cronjob for removing old access.log files
- The job works properly
Dec 11, 2018
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06:01 PM D4Science Infrastructure Incident #13007 (Closed): The maven disk is full and a first try to cleanup the space failed
- The scheduled activity "empty basket" has released ~200 GB of disk.
It will run every day and likely it will take mu... -
05:05 PM D4Science Infrastructure Task #11522 (Feedback): Provide a cronjob for removing old access.log files
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05:04 PM D4Science Infrastructure Task #11522 (In Progress): Provide a cronjob for removing old access.log files
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04:48 PM D4Science Infrastructure Task #11522 (Closed): Provide a cronjob for removing old access.log files
- Added also on root-vo collector. I'm going to set to feedback this ticket in order to check tomorrow if the job works...
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03:58 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- Added to the following hosts:
collector-d4os.d4science.org
collector-parthenosvo.d4science.org
collector-opena... -
03:46 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- Added to:
~~~
collector-d4research.d4science.org
node24.p.d4science.research-infrastructures.eu
collector-sbd.d... -
12:54 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- The cronjob have been properly installed on collector-pre. I'm going to install it on the other hosts.
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12:32 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- Ok. I'm going to run it, in order to test it, in preproduction environment, on collector-pre.d4science.org host.
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03:49 PM D4Science Infrastructure Task #12599 (Closed): Is it possible to install rJava on RStudioLab?
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11:36 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- GRSF restored and GRSF_Admin was already present
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10:55 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- Roberto Cirillo wrote:
> This is the list of all the VREs that are present only on infrastructure-monitor and that s... -
10:50 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- GALAXIDI VRE restored
Dec 10, 2018
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07:23 PM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- See https://support.d4science.org/projects/aginfraplut/wiki/GCore_based_services for the documentation on how to conf...
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10:33 AM D4Science Infrastructure Task #11522: Provide a cronjob for removing old access.log files
- Again the same problem on collector-d4research and collector-openaire. This time I'm not going to remove the logs man...
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07:15 PM D4Science Infrastructure Task #12384 (Feedback): Provide a cronjob for restarting VREModeler service
- The wiki entry is here: https://support.d4science.org/projects/aginfraplut/wiki/GCore_based_services . I also added a...
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07:04 PM D4Science Infrastructure Task #12384 (In Progress): Provide a cronjob for restarting VREModeler service
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06:17 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- ForkysVRE restored
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05:08 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- EllinikaPsariaVRE restored.
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04:42 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- EMPHASIS VRE restored.
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03:51 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- D4STeam has been restored
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03:33 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- CollabResearch is back
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12:47 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- CWP_Secretariat is back
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12:29 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- CFE_DATA restored
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12:04 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- Aquamaps removed (it was still present on infra monitor) and Aquabiotech restored.
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11:15 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- AlieiaVRE is back.
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04:58 PM D4Science Infrastructure Incident #13013 (Closed): Upgrade the Messsages Portlet to gCube 4.13
- The fix will be released with gCube 4.13.1
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04:38 PM D4Science Infrastructure Incident #13013: Upgrade the Messsages Portlet to gCube 4.13
- Your analysts is correct can you release the fix on 4.13.1? Thank you
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03:32 PM D4Science Infrastructure Incident #13013 (Closed): Upgrade the Messsages Portlet to gCube 4.13
- The Messages Portlet is not updated to gCube 4.13. We need to upgrade it.
The last build is available at http://et... -
01:20 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- Andrea Dell'Amico wrote:
> The plugin is installed everywhere.
Great! Thanks a lot! -
01:18 PM D4Science Infrastructure Incident #12894 (Closed): Update of FSK plugin failed
- The plugin is installed everywhere.
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01:08 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- The installation of the plugin is ongoing.
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12:34 PM D4Science Infrastructure Incident #12894 (In Progress): Update of FSK plugin failed
- Lars Valentin wrote:
> Hey Andrea,
>
> could you please point me to the parts where you check if any KNIME proces... -
12:17 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- Hey Andrea,
could you please point me to the parts where you check if any KNIME process is running, before removin... -
12:15 PM D4Science Infrastructure Incident #12894 (Feedback): Update of FSK plugin failed
- I changed the playbook and the cron job configuration. The plugin installation still fails:
~~~
eclipse.buildId=u... -
12:11 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- 1: indeed if no legacy records are published it make sense get rid of that group (but to be kept in the GRSF Admin VR...
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11:43 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Yannis Marketakis wrote:
> The publishing of the records was completed a couple of hours after updating the ticket. ... -
08:24 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- The publishing of the records was completed a couple of hours after updating the ticket.
However, I still see that ...
Dec 09, 2018
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01:28 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- Thank you Andrea,
since we have combined our repositories, `https://dl.bintray.com/silebat/fsklab_icpmf`
does in... -
12:36 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- Here is the ansible knime role, anyway. I've not reworked it to supporto multiple knime versions yet.
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12:31 PM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- The daily update is performed by a cron job that runs a shell script:
~~~
#!/bin/bash
RETVAL=
RETVAL_WF=
DATE=... -
10:26 AM D4Science Infrastructure Incident #12894: Update of FSK plugin failed
- Hi Andrea,
The problem was in the update site of FSK_Lab which cause problems in the cache of P2 repository of KNIME... -
01:23 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed
- Yes, the deleted items was in the trash.
I scheduled a "empty trash" activity, on a daily schedule it will check a... -
12:38 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed
- Agree. At this point we should wait for the upgrade to a newer release. We'll try to work it out ASAP.
Dec 07, 2018
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09:40 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- thanks, no one was imaging the need to purge the grsf vre again, or at least nobody warned me. Anyway thanks a lot an...
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04:03 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Thanks Luca.
I am re-publishing right away -
03:21 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- We cleaned the catalogue.
@marketak@ics.forth.gr can you republish the records? Thanks a lot -
12:46 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- This task is critical since Aureliano already sent the invitation to the GRSF colleagues for reviewing the content of...
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09:01 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- As soon as there's no other way we will republish them
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06:31 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed
- I think the "empty trash" scheduled task should be added to our nexus.
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04:26 PM D4Science Infrastructure Incident #13007 (In Progress): The maven disk is full and a first try to cleanup the space failed
- The file system check did not have any effect. There are ~20GB of free space right now, if I find a way to expand the...
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03:47 PM D4Science Infrastructure Incident #13007: The maven disk is full and a first try to cleanup the space failed
We brought down the server and I'm running a file system check on the maven data disk, it will take some time.
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03:46 PM D4Science Infrastructure Incident #13007 (Closed): The maven disk is full and a first try to cleanup the space failed
@tommaso.piccioli@isti.cnr.it followed the procedure described here: https://support.sonatype.com/hc/en-us/articles...-
06:25 PM D4Science Infrastructure Upgrade #13010 (Completed): Infra-gateways third update to gCube 4.13.0
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06:05 PM D4Science Infrastructure Upgrade #13010 (In Progress): Infra-gateways third update to gCube 4.13.0
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05:54 PM D4Science Infrastructure Upgrade #13010 (Completed): Infra-gateways third update to gCube 4.13.0
- This update features improvements and bug fixes on:
* statistical-algorithms-importer-1.13.1-4.13.0-174674
* wor... -
05:40 PM D4Science Infrastructure VM Creation #12989 (Closed): Please create a VM for new gCat Service
- I just added the nagios check too.
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05:17 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- Do I have to close the ticket, or do you want to leave it as is until you add the Nagios Check?
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05:16 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- It seems working now. Thanks a lot
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05:15 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- Luca Frosini wrote:
> @andrea.dellamico@isti.cnr.it I forget to ask to allow gcat.d4science.org host to be able to c... -
05:08 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- The nagios check can only run GET or POST checks, at least the version that we run right now.
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04:58 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- Also
~~~
OPTIONS https://gcat.d4science.org/gcat/profiles
~~~
which should be faster -
04:57 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- You can use this REST API for Nagis Check:
~~~
GET/HEAD https://gcat.d4science.org/gcat/profiles
~~~ -
04:49 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- @andrea.dellamico@isti.cnr.it I forget to ask to allow gcat.d4science.org host to be able to connect to the postgres ...
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03:59 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- I'm going to test it. Thank you
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03:43 PM D4Science Infrastructure VM Creation #12989 (Feedback): Please create a VM for new gCat Service
- The service is up.
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05:01 PM StocksAndFisheriesKB Bug #13008 (Closed): GRSF Item URLs are not working properly
- The Item URLs published for the GRSF Items (at https://bluebridge.d4science.org/group/grsf/data-catalogue?path=/datas...
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04:27 PM D4Science Infrastructure Incident #13002 (Closed): Files corrupted on the WS
- I have replaced the storageId with the correct one, It works now
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04:15 PM D4Science Infrastructure Incident #13002: Files corrupted on the WS
- The remotepath is present on MongoDB but the related id is the following: 5b1a6f7c02cadc2f6a3e0ad4
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03:29 PM D4Science Infrastructure Incident #13002 (In Progress): Files corrupted on the WS
- The id is not present in the Storage
Roberto can you check in Mongo DB ? :
~~~
data "/Home/gianpaolo.coro/Wor... -
03:21 PM D4Science Infrastructure Incident #13002: Files corrupted on the WS
- the link you pasted return a strange error not related to storagehub : javax.servlet.ServletException: Error retrievi...
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11:10 AM D4Science Infrastructure Incident #13002 (Closed): Files corrupted on the WS
- Some files cannot be downloaded through the DM portlet
Workspace / Datasets / Multi-Image 3D Reconstruction Test C... -
03:44 PM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- ARDAG_Aquaculture is back
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11:40 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
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> Pleasecould you check if all these VREs should be restored on VREManager? Maybe there are some VREs that have be... -
11:36 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- This is the list of all the VREs that are present only on infrastructure-monitor and that should be restored on VREMa...
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11:13 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- >
> Now I'm going to restore the VREs under FARM VO. what expiration date do you suggest?
Thanks, i suggest an e... -
11:09 AM D4Science Infrastructure Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- preVRE and Dorne VRE have been fixed properly.
Dorne was not present on ResourceManager internal state instead pre... -
10:02 AM D4Science Infrastructure Task #12252 (In Progress): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
- First, I'm going to fix the following VREs in preprod environment:
* preVRE
* Dorne
Dec 06, 2018
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06:49 PM D4Science Infrastructure VM Creation #12989 (In Progress): Please create a VM for new gCat Service
- gcat.d4science.org running, to be provisioned.
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10:28 AM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- Andrea Dell'Amico wrote:
> Please add the vault file with the token into `ansible-playbooks/d4science-ghn-cluster/gr... -
06:31 PM StocksAndFisheriesKB Task #12861 (In Progress): Purge old records of the public GRSF Catalogue
- @marketak@ics.forth.gr, @aureliano.gentile@fao.org
I just copied via script to the GRSF Catalogue (see at https:/... -
11:16 AM StocksAndFisheriesKB Task #12861 (Closed): Purge old records of the public GRSF Catalogue
- I created the ticket #12994 for the Group issue
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05:07 PM D4Science Infrastructure Task #12990 (Closed): Thredds: the threddsServlet*.log files are never removed.
- Done on all the instances. The log files are now located into `/home/gcube/tomcat/logs/thredds/`
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04:41 PM D4Science Infrastructure Task #12990 (In Progress): Thredds: the threddsServlet*.log files are never removed.
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04:10 PM StocksAndFisheriesKB Bug #12994 (Rejected): Group are not created in GRSF VRE
- The GRSF service automatically associates a group to a record using some defined fields. If the group does not exist ...
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12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE
- ~~~
2018-12-03 10:01:16,677 [Thread-63126] ERROR DataCatalogueImpl: Unable to check if this role was already set, pl... -
12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE
- @francesco.mangiacrapa@isti.cnr.it can you please check it?
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12:46 PM StocksAndFisheriesKB Bug #12994: Group are not created in GRSF VRE
- It seems an issue related to privileges of grsf.publisher with such catalogue:
~~~
2018-12-03 10:01:16,677 [Threa... -
11:15 AM StocksAndFisheriesKB Bug #12994 (Rejected): Group are not created in GRSF VRE
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03:28 PM D4Science Infrastructure Task #12927 (Closed): Thredds WMS AquaMaps configuration
- The templates now reflect the manual changes of the thredds config files.
The mixed content problems cannot be solv... -
10:35 AM D4Science Infrastructure VM Creation #11771 (Closed): Please create a VM having access to prod authorization service
Dec 05, 2018
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07:18 PM D4Science Infrastructure Task #12990: Thredds: the threddsServlet*.log files are never removed.
- thredds uses log4j, the configuration is `WEB-INF/classes/log4j2.xml` and the `threddsServlet` part misses a `Default...
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07:17 PM D4Science Infrastructure Task #12990 (Closed): Thredds: the threddsServlet*.log files are never removed.
Also, it puts the logs into the data directory. Better move them into the tomcat logs one.
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07:05 PM D4Science Infrastructure Task #12927 (Feedback): Thredds WMS AquaMaps configuration
- The changes have been applied.
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04:41 PM D4Science Infrastructure Task #12927 (In Progress): Thredds WMS AquaMaps configuration
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06:59 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- Please add the vault file with the token into `ansible-playbooks/d4science-ghn-cluster/group_vars/gcat_prod/vault-fil...
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05:54 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- I have fixed the playbook of gcat service as suggested by @andrea.dellamico@isti.cnr.it
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03:28 PM D4Science Infrastructure VM Creation #12989: Please create a VM for new gCat Service
- I already created the skeleton playbook for gcat service.
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03:17 PM D4Science Infrastructure VM Creation #12989 (Closed): Please create a VM for new gCat Service
- gCat is the new gCube Catalogue Service (it will replace the old catalogue-ws).
For a certain period, we will have... -
04:52 PM StocksAndFisheriesKB Task #12974 (Closed): Update intro text in the GRSF VRE
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04:49 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE
- More than perfect, thanks!
We are now about to inform the GRSF team colleagues to start the review of the pilot rele... -
04:44 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE
- Aureliano Gentile wrote:
> Thanks a lot, please see a couple of text modifications in the attached screenshot, if po... -
04:04 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE
- Thanks a lot, please see a couple of text modifications in the attached screenshot, if possible.
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10:30 AM StocksAndFisheriesKB Task #12974 (Feedback): Update intro text in the GRSF VRE
- Done. @aureliano.gentile@fao.org, you can check it at https://i-marine.d4science.org/group/grsf/data-catalogue
I hav... -
10:14 AM StocksAndFisheriesKB Task #12974 (In Progress): Update intro text in the GRSF VRE
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04:23 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- I was using an incomplete command. The right one is:
~~~
./run.sh smartexecutor-services.yml -i inventory/hosts.p... -
03:22 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- Nope, the cause must be different. The nagios-related tasks have a `ignore_errors: True` entry.
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03:19 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- The playbook fail for me because I have no root access on "monitoring.research-infrastructures.eu".
It fails when th... -
03:14 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- The correct playbook for the smart excutors is `smartexecutor-services.yml`. They were split some months ago, because...
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12:48 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- I fixed the playbook and tried to launch the playbook which stop after few steps.
~~~
./run.sh smartgears-node.ym... -
10:48 AM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- The error was related to duplicated and missing dependencies causing exceptions (the error was related to wrong scope...
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01:18 PM D4Science Infrastructure Task #12964: logback does not change its configuration at runtime
- I tested a log level change on accounting-harvester.d4science.org and it worked.
Thanks a lot -
10:50 AM D4Science Infrastructure Incident #12978: Scoial Networking provide a '500 Internal Server Error' status code in certain contexts
- @massimiliano.assante@isti.cnr.it please relate the ticket
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10:50 AM D4Science Infrastructure Incident #12978: Scoial Networking provide a '500 Internal Server Error' status code in certain contexts
- So you have to fix the resources on IS
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09:54 AM D4Science Infrastructure Incident #12978 (Rejected): Scoial Networking provide a '500 Internal Server Error' status code in certain contexts
- The listed VRE scopes belong to undeployed VREs, these no longer existing on the gateway but it could be that the sco...
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09:26 AM D4Science Infrastructure Incident #12978 (Rejected): Scoial Networking provide a '500 Internal Server Error' status code in certain contexts
- The invoked REST API is:
~~~
http://socialnetworking1.d4science.org:80/social-networking-library-ws/rest/2/users/... -
10:05 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Yannis Marketakis wrote:
> @francesco.mangiacrapa@isti.cnr.it the records published in GRSF VRE are replicas of GRSF... -
08:00 AM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- @francesco.mangiacrapa@isti.cnr.it the records published in GRSF VRE are replicas of GRSF records found in GRSF Admin...
Dec 04, 2018
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06:38 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- Yes please.
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05:37 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- I checked the machine and the plugin is not working properly. I'm investigating the issue.
Apart from the issue, I j... -
06:33 PM D4Science Infrastructure Task #12599 (Feedback): Is it possible to install rJava on RStudioLab?
- Now it's working for me on all the instances I have access to. Any feedback?
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05:38 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- Yannis Marketakis wrote:
> @aureliano.gentile@fao.org grouping is a facility offered by the catalogue. Such informat... -
05:06 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- thanks, @francesco.mangiacrapa@isti.cnr.it you have your answer from FORTH.
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03:52 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- @aureliano.gentile@fao.org grouping is a facility offered by the catalogue. Such information is not stored in the GRS...
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12:59 PM StocksAndFisheriesKB Task #12861: Purge old records of the public GRSF Catalogue
- As per interaction with @francesco.mangiacrapa@isti.cnr.it I would need assistance from:
@marketak@ics.forth.gr fo... -
03:10 PM D4Science Infrastructure Task #12968 (Rejected): Add the javaIO plugin for Tiff if is missing
- We need a different solution.
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02:26 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing
- Also, read the latest comments: https://bugs.java.com/bugdatabase/view_bug.do?bug_id=8156745 : not only it's unsuppor...
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12:44 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing
- The place should be this one: https://www.oracle.com/technetwork/java/install-jai-imageio-1-0-01-139659.html but ther...
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12:40 PM D4Science Infrastructure Task #12968: Add the javaIO plugin for Tiff if is missing
- That library is so old that I don't find a way to download it...
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10:12 AM D4Science Infrastructure Task #12968 (Rejected): Add the javaIO plugin for Tiff if is missing
- About this Incident #12787
I released in production a Workspace utility to create the thumbnail (on the fly) of an... -
02:58 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- Yes Emmanuel, we already planned to solve this type of issues on one of next releases
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02:55 PM D4Science Infrastructure Incident #12965 (Closed): Error creating shared folder in workspace
- Thanks Lucio, I confirm it works now. Maybe it would be good to add some rules to prevent user from using these speci...
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12:16 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- Hi Emmanuel can you try now to share your folder ? I had to rename your folder replacing the "long dash" (that is not...
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12:40 PM StocksAndFisheriesKB Task #12974: Update intro text in the GRSF VRE
- The URL of the page is the following https://i-marine.d4science.org/group/grsf/data-catalogue
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12:16 PM StocksAndFisheriesKB Task #12974 (Closed): Update intro text in the GRSF VRE
- Following the bulk approval of GRSF records (pilot release), please update the introductory text as follows. Once don...
Dec 03, 2018
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06:01 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- The path in my workspace is:
/Workspace/FAO Missions/TT 4 – 7th June 2018 Chaguanas - Trinidad – R Training course
... -
03:03 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- Hi Emmanuel, I tried the same thing and it worked, can you please tell me the absolute path of the folder?
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12:26 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- i'm the owner of the folder
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12:24 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- https://services.d4science.org/group/d4science-services-gateway/workspace
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12:04 PM D4Science Infrastructure Incident #12965: Error creating shared folder in workspace
- Hi @emmanuel.blondel1@gmail.com, we need a bit of context.
Which gateway are you using?
Is the folder a subfolder... -
11:36 AM D4Science Infrastructure Incident #12965 (Closed): Error creating shared folder in workspace
- I've tried to share a workspace folder with colleagues (Y. Laurent, M. Taconet), and I get an error (see attached scr...
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04:41 PM StocksAndFisheriesKB Task #12861 (In Progress): Purge old records of the public GRSF Catalogue
- New records have been published in the GRSF VRE, the entry page is not showing "Browse by Organisations" and "Browse ...
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02:36 PM StocksAndFisheriesKB Task #12858 (Closed): Purge old records from public GRSF VRE
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02:35 PM StocksAndFisheriesKB Task #12857 (Closed): Bulk approval of (valid) GRSF records
- We have already approved and published the records in the public GRSF VRE.
You can see the results in https://servic... -
01:03 PM StocksAndFisheriesKB Task #12857: Bulk approval of (valid) GRSF records
- Dear FORTH colleagues, do you envisage a new data harvest before approving? At least from FIRMS where in the meantime...
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02:16 PM ISTI Open Access Feature #11601: Migrate the OpenPortal services to production machines
- I think that 3 machines are necessary for the production deployment:
1. dnet.openportal.isti.cnr.it (java 8 + tomc... -
12:32 PM D4Science Infrastructure Incident #12922 (Closed): Workspace get link not working
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12:32 PM D4Science Infrastructure Incident #12923 (Closed): Workspace public folders are shown as regular shared folders
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09:19 AM D4Science Infrastructure Task #12964: logback does not change its configuration at runtime
- It sounds really good.
Nov 30, 2018
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09:28 PM D4Science Infrastructure Task #12964 (Closed): logback does not change its configuration at runtime
- I added `scanPeriod="60 seconds"` to the logback template in the smartgears playbook.
The change must be provisione... -
09:25 PM D4Science Infrastructure Task #12964 (In Progress): logback does not change its configuration at runtime
- It's a bug, introduced in version 1.1.7 and fixed in 1.1.13. The bug tracking is here: https://jira.qos.ch/browse/LOG...
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09:22 PM D4Science Infrastructure Task #12964 (Closed): logback does not change its configuration at runtime
- It should reload its configuration ad fixed intervals, but it does not.
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09:05 PM D4Science Infrastructure VM Creation #11771 (Feedback): Please create a VM having access to prod authorization service
- The service has been deployed. I see no errors in the tomcat logs, can you check if it's working?
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08:55 PM D4Science Infrastructure Task #12963 (Closed): Routinely restart the ldap service on the replicas
- Cron job installed.
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08:50 PM D4Science Infrastructure Task #12963 (In Progress): Routinely restart the ldap service on the replicas
- I'm adding the task that install a cron job to restart the service, at a different hour on the replicas with respect ...
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06:52 PM D4Science Infrastructure Task #12963 (Closed): Routinely restart the ldap service on the replicas
After some days of uptime, the nagios check starts failing even if the service seems to respond to the local client...-
06:43 PM D4Science Infrastructure Task #12827 (Closed): Configure CKAN to store .cache files (that are session info) in memory
- All the servers have been reconfigured.
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01:12 PM StocksAndFisheriesKB Task #12857 (In Progress): Bulk approval of (valid) GRSF records
Nov 29, 2018
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06:38 PM D4Science Infrastructure VM Creation #11771 (In Progress): Please create a VM having access to prod authorization service
- Hostname and Ip address are going to be accounting-harvester.d4science.org 146.48.122.7.
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04:09 PM D4Science Infrastructure Task #12949 (Closed): Provide a cronjob for avoiding ldap problem on rstudio instances
- Cron job installed on the production rstudio servers. It runs once a minute.
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01:22 PM D4Science Infrastructure Task #11162 (Closed): both d4science portal cluster nodes accessibile directly via http
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01:21 PM D4Science Infrastructure Task #6232 (Closed): Enable Infrastructure Gateway cluster communication behind firewall
- Done.
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12:51 PM D4Science Infrastructure Incident #12956 (Rejected): Workspace move operation, workspace explorer lists folders as empty while browsing
- This behaviour is not an incident. During moving operation the Workspace Explorer widget shows only folders (not file...
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12:24 PM D4Science Infrastructure Incident #12956: Workspace move operation, workspace explorer lists folders as empty while browsing
- Similar error on RAKIP_portal:
~~~
2018-11-29 06:16:36,108 INFO o.g.p.w.w.s.WorkspaceExplorerServiceImpl [ajp-... -
10:12 AM D4Science Infrastructure Incident #12956 (Rejected): Workspace move operation, workspace explorer lists folders as empty while browsing
- When performing a move and browsing using the workspace explorer it sometimes says the folder is empty (but its not)....
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12:31 PM D4Science Infrastructure VRE #12959 (Available): EOSC Pilot VisualMedia VRE
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11:20 AM D4Science Infrastructure VRE #12959 (Released): EOSC Pilot VisualMedia VRE
- The EOSC VisualMedia VRE will be accessible via the D4Science Gateway (https://services.d4science.org/explore) under ...
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09:26 AM StocksAndFisheriesKB Bug #12906 (Closed): Update "problematic" records in the GRSF admin catalog
- The following records have been updated:
* 701 legacy Stock records (from FIRMS)
* 2928 GRSF Stock records -
07:39 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- @pasquale.pagano@isti.cnr.it
Thanks a lot for the detailed explanation!
In the past I always understood that t...
Nov 28, 2018
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03:39 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- Yes, please
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01:23 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
- Can we start the activity now?
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02:15 PM D4Science Infrastructure Support #12950 (Closed): Issue with access in SDI_lab VRE RStudio
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12:43 PM D4Science Infrastructure Support #12950 (Resolved): Issue with access in SDI_lab VRE RStudio
- Thanks, user can access his Rstudio now.
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10:14 AM D4Science Infrastructure Support #12950 (Feedback): Issue with access in SDI_lab VRE RStudio
- Please could you retry now? I've reset @mathias.rouan@univ-brest.fr local state.
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10:04 AM D4Science Infrastructure Support #12950 (In Progress): Issue with access in SDI_lab VRE RStudio
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01:18 PM D4Science Infrastructure Support #12636 (Closed): Redmine: preventing email addresses to be shown in public projects
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01:18 PM D4Science Infrastructure Task #12387 (Closed): Increment the prometheus data retention, right now it's too limited.
- I just incremented it to one year, I guess we are going to need more disk space in the near future.
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01:14 PM D4Science Infrastructure Support #12864 (Closed): Nagios down
Nov 27, 2018
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10:25 PM D4Science Infrastructure Support #12950 (Closed): Issue with access in SDI_lab VRE RStudio
- Hello, I'm writing this ticket on behalf of a SDI_Lab VRE user @mathias.rouan@univ-brest.fr in, who is facing issue w...
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05:23 PM D4Science Infrastructure Task #6232: Enable Infrastructure Gateway cluster communication behind firewall
- I'm working on this one again. To accomodate the needs of the liferay cluster communications I had to rewrite some pa...
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04:41 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- I will add a bit of technical information since I believe it is not yet clear.
D4Science operated by CNR supports... -
02:38 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure
- No need to continue keeping this ticket open, there was a misunderstanding and that's all.
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01:12 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Lars Valentin wrote:
> Why do you say I am fighting? I was kindly asking why we have this gap in what CNR said befor... -
01:07 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Why do you say I am fighting? I was kindly asking why we have this gap in what CNR said before and does say now.
A... -
12:57 PM D4Science Infrastructure Task #12806 (Feedback): Testing the new settings of the RAKIP infrastructure
- Hey @lars.valentin@bfr.bund.de
yes there is a big misunderstanding here (and not only here I would say). The over... -
12:46 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
I add examples of what CNR said in the past:
https://support.d4science.org/issues/12614#note-5
https://suppo...-
12:42 PM D4Science Infrastructure Task #12806 (In Progress): Testing the new settings of the RAKIP infrastructure
- Leonardo Candela wrote:
> @lars.valentin@bfr.bund.de thanks for the explanation. What was puzzling me was the commen... -
12:28 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure
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12:28 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- @lars.valentin@bfr.bund.de thanks for the explanation. What was puzzling me was the comment "multicore use does **now...
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04:40 PM D4Science Infrastructure Task #12949 (Closed): Provide a cronjob for avoiding ldap problem on rstudio instances
- Sometimes we have ldap problems on rstudio instances maybe due to a ldap timeout.
It's needed to provide a cronjob i... -
03:59 PM D4Science Infrastructure Incident #12944 (Closed): Error Connecting on rstudio2.d4science.org
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03:10 PM D4Science Infrastructure Incident #12944 (In Progress): Error Connecting on rstudio2.d4science.org
- I've tried to reset your user's state but nothing change. I see a strange error on system logs, I'm going to investig...
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12:48 PM D4Science Infrastructure Incident #12944: Error Connecting on rstudio2.d4science.org
- AnalyticsLab
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12:15 PM D4Science Infrastructure Incident #12944 (Feedback): Error Connecting on rstudio2.d4science.org
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12:11 PM D4Science Infrastructure Incident #12944 (In Progress): Error Connecting on rstudio2.d4science.org
- Please could you provide the VRE you are using?
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11:53 AM D4Science Infrastructure Incident #12944 (Closed): Error Connecting on rstudio2.d4science.org
- When connecting on https://rstudio2.d4science.org/r-connector/gcube/service/connect?gcube-token=0deee49b-****** i get...
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02:58 PM D4Science Infrastructure VRE #12946 (In Progress): D4Research/FAIR_DM VRE Removal
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02:58 PM D4Science Infrastructure VRE #12946 (Removed): D4Research/FAIR_DM VRE Removal
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02:36 PM D4Science Infrastructure VRE #12913 (Removed): gCubeApps/ICOS_ETC VRE Removal
- The VRE has been disposed successfully.
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02:32 PM D4Science Infrastructure VRE #12913: gCubeApps/ICOS_ETC VRE Removal
- The undeployment has been triggered
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02:29 PM D4Science Infrastructure VRE #12913 (In Progress): gCubeApps/ICOS_ETC VRE Removal
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02:28 PM D4Science Infrastructure VRE #12913 (Planned): gCubeApps/ICOS_ETC VRE Removal
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02:27 PM D4Science Infrastructure VRE #12848 (Removed): D4Research/BOBLME_HilsaAWG Removal
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02:27 PM D4Science Infrastructure VRE #12848 (In Progress): D4Research/BOBLME_HilsaAWG Removal
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12:30 PM D4Science Infrastructure Task #12614 (Closed): Need server with joblength 1 to use all 16 cores and a cue system per server.
- I'm going to close the ticket. According to #12806 the RAKIP VRE cluster is supporting the expected case.
Nov 26, 2018
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06:01 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory
- @francesco.mangiacrapa@isti.cnr.it will decide when reconfigure the remaining CKAN instances.
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05:26 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory
- Reconfiguration of the sobigdata ckan servers is ongoing. It will take some time, because the old sessions data is be...
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01:01 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- "Sharks - Global" (http://data.d4science.org/ctlg/GRSF_Admin/41cdffcb-fff2-3aaa-ab38-1d23a2b651c4) is marine resource...
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12:19 PM StocksAndFisheriesKB Bug #12906 (In Progress): Update "problematic" records in the GRSF admin catalog
- I would prefer an automatic way of identifying them (so that we are sure that future updates are consistent). I under...
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10:37 AM D4Science Infrastructure Upgrade #12936 (Completed): Infra-gateways second update to gCube 4.13.0
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10:07 AM D4Science Infrastructure Upgrade #12936 (In Progress): Infra-gateways second update to gCube 4.13.0
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10:07 AM D4Science Infrastructure Upgrade #12936 (Completed): Infra-gateways second update to gCube 4.13.0
- This update features improvements and bug fixes on:
* Workspace portlet (26 Nov 2018)
* PerformFISH KPI Applicat... -
10:03 AM D4Science Infrastructure Task #6309 (Closed): D4Science Infrastructure migration to Java 8
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10:03 AM D4Science Infrastructure Task #6309 (In Progress): D4Science Infrastructure migration to Java 8
- the ticket is old and will be closed. the migration was performed since a while ...
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10:02 AM D4Science Infrastructure Task #6312 (Closed): Java 8 unexpected behaviours should be communicated by the gCube VRE Social Facility
Nov 23, 2018
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10:09 PM D4Science Infrastructure Task #12806 (Feedback): Testing the new settings of the RAKIP infrastructure
- Hi Leonardo,
as a developer of services, I have to prove that the outcame of my work is behaving as expected. Ther... -
04:03 PM D4Science Infrastructure Task #12806 (In Progress): Testing the new settings of the RAKIP infrastructure
- Lars Valentin wrote:
> Hi @g.panichi@isti.cnr.it ,
>
> thanks a lot for helping me. Looks like the multicore use ... -
03:29 PM D4Science Infrastructure Task #12806 (Closed): Testing the new settings of the RAKIP infrastructure
- Hi @g.panichi@isti.cnr.it ,
thanks a lot for helping me. Looks like the multicore use does now behave as expected ... -
03:18 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Sorry @lars.valentin@bfr.bund.de , I had not noticed the amount of files produced.
Well, then the execution of your ... -
03:08 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Hi @lars.valentin@bfr.bund.de , I tried your algorithm Dm15coresuse with the default parameter, and is actually using...
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03:00 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Hi @g.panichi@isti.cnr.it
looks like my previous message got lost while uploading.
Thank you for taking over! ... -
02:18 PM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- Hi @lars.valentin@bfr.bund.de , please could you give me the Equivalent Get Request that is given by the DataMiner wh...
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11:48 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
- I'm passing this activity to @g.panichi@isti.cnr.it, he knows dataminer much better than me.
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07:15 AM D4Science Infrastructure Task #12806: Testing the new settings of the RAKIP infrastructure
> They work properly, and they are related to the servers you are using.
>
> I cannot spend time staring at a bu...-
05:29 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- I updated the list of FIRMS, please find attached excel file.
The presence of Text in the "State and trend of Marine... -
05:07 PM D4Science Infrastructure Task #12935: sdi-service: upgrade commons-codec library
- Updated remote build against gcube 4.13 has been performed. Report available here : http://etics.esl.eng.it/etics-rep...
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04:56 PM D4Science Infrastructure Task #12935 (In Progress): sdi-service: upgrade commons-codec library
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04:55 PM D4Science Infrastructure Task #12935 (Closed): sdi-service: upgrade commons-codec library
- It's needed to upgrade the commons-codec library from 1.2 to 1.8 on sdi.d4science.org.
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12:22 PM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory
- I see that the sessions directory under /tmp is empty and I see CKAN sessions into the memcache data, so I guess the ...
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11:49 AM D4Science Infrastructure Task #12827: Configure CKAN to store .cache files (that are session info) in memory
- Hi @andrea.dellamico@isti.cnr.it,
I just performed some tests in dev and the catalogue ckan-d seems to work fine.... -
11:18 AM D4Science Infrastructure Incident #12923 (Feedback): Workspace public folders are shown as regular shared folders
- The fix has been released on preoprod
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11:17 AM D4Science Infrastructure Incident #12922 (Feedback): Workspace get link not working
- The issue has been fixed and the patched Workspace deployed on preprod.
Nov 22, 2018
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06:39 PM D4Science Infrastructure Task #12927: Thredds WMS AquaMaps configuration
- The archive has been stored in Workspace :
* path : VRE Folders/gCube/Configuration files/THREDDS 4.6/customPalettes... -
05:03 PM D4Science Infrastructure Task #8935 (Closed): Delete Statistical Service from the VRE Modeler resource in all VOs
- Statistical service removed as reported here: #12606
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05:03 PM D4Science Infrastructure Task #8935 (In Progress): Delete Statistical Service from the VRE Modeler resource in all VOs
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04:56 PM D4Science Infrastructure Task #12425 (Closed): Enable TLS/SSL on the mongodb clusters
- Upgrade done.
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03:47 PM D4Science Infrastructure Task #12742 (Closed): DataMiner - Support Python 3.6
- The DMPoolManager was released in gCube 4.13.
Now, it is possible to create algorithms for Python 3.6 specifically t... -
03:37 PM D4Science Infrastructure Task #12789 (Closed): DMPoolManger - Support Python 3.6
- The component has been released in gCube 4.13 see ticket #12440
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02:25 PM StocksAndFisheriesKB Feature #12278: Complete Citation development
- I just noticed this citation and it says "FAO 2018" https://bluebridge.d4science.org/group/grsf_admin/data-catalogue?...
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02:23 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- Sure. Attached you will find the corresponding titles
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01:55 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- Thanks, I'll review. Actually with the title next to the URL it would be much easier for me to spot which are assessm...
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12:29 PM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- Attached you will find the list of stocks records that have state and trend info and do not have time-series info.
... -
11:44 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- One clarification: if the record has status trend indicators then it is an Assessment Unit by default. These status i...
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11:25 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- Thank you for the answer. So I will update the type of the record. Would you like to do it for all the records that f...
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11:20 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- Thanks, I confirm the overall requirement https://support.d4science.org/projects/stocksandfisherieskb/wiki/GRSF_datab...
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11:05 AM StocksAndFisheriesKB Bug #12906: Update "problematic" records in the GRSF admin catalog
- @aureliano.gentile@fao.org As regards the record http://data.d4science.org/ctlg/GRSF_Admin/ee1d7967-6da2-3d8a-88d5-c...
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01:22 PM D4Science Infrastructure Task #11977 (Closed): Make the tagme service more reliable.
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12:59 PM D4Science Infrastructure Task #11977: Make the tagme service more reliable.
- The load balancer is already configured to use both tagme1 and tagme2 as tagme backends. tagme2 will be in use as soo...
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01:20 PM D4Science Infrastructure VM Creation #12930 (Closed): New TAGME instance at GARR-PA1
- The VM has been provisioned and it is active.
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12:52 PM D4Science Infrastructure VM Creation #12930 (In Progress): New TAGME instance at GARR-PA1
- hostname is tagme2.garr.d4science.org. The provisioning is running.
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12:50 PM D4Science Infrastructure VM Creation #12930 (Closed): New TAGME instance at GARR-PA1
- So that we run two identical instances.
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12:28 PM D4Science Infrastructure Task #11976 (Closed): New load balancer for the tagme service
- Done.
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11:35 AM D4Science Infrastructure Upgrade #12738 (Completed): D4Science Infrastructure Upgrade to gCube 4.13.0
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11:06 AM StocksAndFisheriesKB Task #12856: Verification of GRSF merging process
- Thank you @emmanuel.blondel1@gmail.com .
I will invoke this in the merging process and let you know if we face any p... -
10:59 AM StocksAndFisheriesKB Bug #12419 (Closed): Fishing Pressure time series is missing in several records
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10:54 AM StocksAndFisheriesKB Bug #12419: Fishing Pressure time series is missing in several records
- The missing time-series have been added into GRSF KB (aprox. 400 were missing).
As a proof of concept we have update... -
10:58 AM D4Science Infrastructure Incident #12923 (In Progress): Workspace public folders are shown as regular shared folders
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10:33 AM D4Science Infrastructure Upgrade #12772 (Completed): D4Science Preprod Gateway upgrade to gCube 4.13.0
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10:00 AM D4Science Infrastructure Upgrade #12772: D4Science Preprod Gateway upgrade to gCube 4.13.0
- can this ticket be closed?
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10:30 AM D4Science Infrastructure Upgrade #12773 (Completed): D4Science Gateway upgrade to gCube 4.13.0
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10:30 AM D4Science Infrastructure Upgrade #12773 (In Progress): D4Science Gateway upgrade to gCube 4.13.0
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10:00 AM D4Science Infrastructure Upgrade #12773: D4Science Gateway upgrade to gCube 4.13.0
- Can this ticket be closed?
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