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From Jul 05, 2018 to Aug 03, 2018

Aug 03, 2018

06:53 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
I'll start with the knime installation next week.
Andrea Dell'Amico
05:22 PM Support #12308 (Closed): Workspace folders in Foster VRE not accessible by some users also in openAIRE/OpenAIRE-Connect
Lino solved the issue for the people who reported the issue.
A generic solution to be applied to remaining users in ...
Alessia Bardi
04:29 PM Support #12314 (Closed): couchbase7 nagios alert
Couchbase seems to be stable at the moment.
We will take care of this issue and these informations if there will be ...
Tommaso Piccioli
10:48 AM Support #12314: couchbase7 nagios alert
In attachment some logs extracted from geoserver-1-p-spatial.d4science.org. Roberto Cirillo
10:46 AM Support #12314 (Closed): couchbase7 nagios alert
Nagios alert on couchbase7 since this night. Please could you check?
I've found an huge number of accounting logs on...
Roberto Cirillo
12:50 PM Task #12315 (Rejected): geoserver1-p-spatial.d4science.org logs everything ad DEBUG level
Ah sorry, I looked at the logs this morning and I forgot to open the ticket until some minutes ago. In the meantime y... Andrea Dell'Amico
12:39 PM Task #12315: geoserver1-p-spatial.d4science.org logs everything ad DEBUG level
@andrea.dellamico@isti.cnr.it where do you see the logs at DEBUG level? the container has been restarted today at 10... Roberto Cirillo
12:27 PM Task #12315 (Rejected): geoserver1-p-spatial.d4science.org logs everything ad DEBUG level
It seems that it runs the old broken logback configuration. Andrea Dell'Amico
11:57 AM Task #12312 (Closed): Increase RAM on geoserver.d4science.org
OK, so we'll handle the other ones on request, when needed. Andrea Dell'Amico
11:47 AM Task #12312: Increase RAM on geoserver.d4science.org
The 4 geoservers are used to equally distribute the publication of new geospatial datasets. Then, at access time clea... Pasquale Pagano
11:45 AM Task #12312: Increase RAM on geoserver.d4science.org
The policy we endorsed with these geoserver instances is to distribute the number of layers they host, so it is possi... Fabio Sinibaldi
11:42 AM Task #12312: Increase RAM on geoserver.d4science.org
Andrea Dell'Amico wrote:
> On this one only? we also have geoserver2/3/4 with the same hardware resources. The reque...
Roberto Cirillo
11:37 AM Task #12312 (Feedback): Increase RAM on geoserver.d4science.org
The heap size was incremented too. Andrea Dell'Amico
11:14 AM Task #12312: Increase RAM on geoserver.d4science.org
The VM is now running with 5GB of RAM. Andrea Dell'Amico
11:12 AM Task #12312 (In Progress): Increase RAM on geoserver.d4science.org
On this one only? we also have geoserver2/3/4 with the same hardware resources. The requests are not evenly distribut... Andrea Dell'Amico
10:18 AM Task #12312 (Closed): Increase RAM on geoserver.d4science.org
It's needed to add 2 GB of RAM to the following VM
~~~
geoserver.d4science.org
~~~
in order to increase the h...
Roberto Cirillo
10:42 AM Incident #12313 (Closed): geoserver1-p-spatial.d4science.org: disk full for accounting logs
The log level was set to the unknown level FATAL. Now I've replaced FATAL to ERROR and the situation seems to be back... Roberto Cirillo
10:35 AM Incident #12313 (In Progress): geoserver1-p-spatial.d4science.org: disk full for accounting logs
Roberto Cirillo
10:34 AM Incident #12313 (Closed): geoserver1-p-spatial.d4science.org: disk full for accounting logs
Only today 1484 file of accounting logs and 1577 file of ghn.log have been written with log level set to DEBUG.
I'...
Roberto Cirillo
10:08 AM Incident #12311 (Closed): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
The container has been restarted. The RAM size should be increased. Roberto Cirillo
10:05 AM Incident #12311 (In Progress): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
Roberto Cirillo
10:05 AM Incident #12311 (Closed): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
Roberto Cirillo

Aug 02, 2018

05:40 PM Support #12308: Workspace folders in Foster VRE not accessible by some users also in openAIRE/OpenAIRE-Connect
Did you keep track of the old and new usernames?
For how many users the username was changed?
Alessia Bardi
02:38 PM Support #12308: Workspace folders in Foster VRE not accessible by some users also in openAIRE/OpenAIRE-Connect
@pasquale.pagano@isti.cnr.it I changed their usernames some days ago, to the ones they have on the old ldap servers. ... Andrea Dell'Amico
02:33 PM Support #12308: Workspace folders in Foster VRE not accessible by some users also in openAIRE/OpenAIRE-Connect
please @francesco.mangiacrapa@isti.cnr.it and @lucio.lelii@isti.cnr.it try to understand why those users are not able... Pasquale Pagano
01:41 PM Support #12308 (Closed): Workspace folders in Foster VRE not accessible by some users also in openAIRE/OpenAIRE-Connect
Eloy Rodrigues (eloy@sdum.uminho.pt) and José Carvalho (jcarvalho@sdum.uminho.pt) can't access the workspace folders ... Alessia Bardi
05:38 PM Task #12310 (In Progress): is-exporter.d4science.org contains wrong plugin
is-exporter.d4science.org contains accounting-aggregator plugin instead of the is-exporter plugin.
I stopped the c...
Luca Frosini
05:31 PM Task #12310 (Closed): is-exporter.d4science.org contains wrong plugin
Luca Frosini
04:20 PM VM Creation #11954: VM to host the GRSF-services-updater service
I've just deployed grsf-services-updater on http://maven.research-infrastructures.eu/nexus/content/repositories/gcube... Yannis Marketakis
01:23 PM VM Creation #11954: VM to host the GRSF-services-updater service
Do we have an artifact yet? I cannot find anything in nexus. Andrea Dell'Amico
02:51 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
I see that now the resource is correctly published on FARM VO and the portlet works on CollabResearch VRE. Roberto Cirillo
02:47 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
OK, thanks. Andrea Dell'Amico
02:45 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
There was a problem with the registry service of FARM VO during the restart from last night. Now the problem is solve... Roberto Cirillo
02:34 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
It also happens for /d4science.research-infrastructures.eu/FARM/D4STeam, but I don't know why. @roberto.cirillo@isti.... Andrea Dell'Amico
01:55 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
I'm not able to use sharelatex.
At https://services.d4science.org/group/collabresearch/sharelatex I get:
No gCo...
Luca Frosini
01:04 PM Incident #12303 (Closed): The production Sharelatex instance is not using a permanent storage for the users documents
There's no way to add a volume to an existing container. As we are running a specific version with lots of local cust... Andrea Dell'Amico
01:01 PM Incident #12303 (In Progress): The production Sharelatex instance is not using a permanent storage for the users documents
Andrea Dell'Amico
01:15 PM Task #12307 (Closed): Backup the container volumes

On sharelatex.d4science.org: /srv/sharelatex_data/
On docker-exec1.d4science.org: /var/lib/docker/volumes/
Andrea Dell'Amico
11:29 AM Task #12247 (Closed): Please upgrade collector-sa-d4s.smart-applications.area.pi.cnr.it
The node has been upgraded Roberto Cirillo
10:55 AM Task #12247 (In Progress): Please upgrade collector-sa-d4s.smart-applications.area.pi.cnr.it
This is the resource-manager service, it's not smartgears but gCore. gCore based services are still run with Java7. I... Roberto Cirillo

Aug 01, 2018

04:39 PM Incident #12303: The production Sharelatex instance is not using a permanent storage for the users documents
I'm going to stop the service, copy the user data outside the container, than restart the container with the external... Andrea Dell'Amico
04:38 PM Incident #12303 (Closed): The production Sharelatex instance is not using a permanent storage for the users documents
There was a mistake in the ansible task that launches the container instance: the syntax for the volume configuration... Andrea Dell'Amico
04:30 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Lars Valentin wrote:
> Dear Andrea,
>
> in the future we want to allow the user to run there own R models in our...
Andrea Dell'Amico
01:05 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Dear Andrea,
in the future we want to allow the user to run there own R models in our service (workflow). The iss...
Lars Valentin
02:57 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Dear Lars,
> In order to test the new application for our use case, I need to wait until our KNIME ticket is solve...
Pasquale Pagano
12:13 PM Task #12162 (Closed): Critical memory alert on GNs
geonetwork-aquacultureatlasgeneration.d4science.org restarted with the new heap size. Roberto Cirillo
12:05 PM Task #12162 (In Progress): Critical memory alert on GNs
Now we have the same problem on geonetwork-aquacultureatlasgeneration.d4science.org.
I'm going to decrease the heap ...
Roberto Cirillo

Jul 31, 2018

06:04 PM Task #12276 (Closed): To much log data on ckan-bb1.d4science.org
the container has been restarted. I'm going to close this ticket. Roberto Cirillo
02:07 PM Task #12276: To much log data on ckan-bb1.d4science.org
I've just changed the logback configuration on ckan-bb1. Now it's needed a container restart, it will be done this ev... Roberto Cirillo
12:51 PM Task #12276: To much log data on ckan-bb1.d4science.org
Yes, it's smartgears. Andrea Dell'Amico
12:45 PM Task #12276: To much log data on ckan-bb1.d4science.org
accounting.log and ghn.log are not logs belonging to CKAN. Are they of Smartgears?
CKAN's logs are at INFO level a...
Francesco Mangiacrapa
12:23 PM Task #12276 (Closed): To much log data on ckan-bb1.d4science.org
Please, reduce the logging data on ckan-bb1.
At the moment TRACE information are logged (duplicated) in both the acc...
Tommaso Piccioli
04:46 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Dear Pasquale, Dear Francesco,
In order to test the new application for our use case, I need to wait until our KNI...
Lars Valentin
04:13 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Dear Andrea,
as promised I provide you some of my ANSIBLE code as inspiration for you.
Here a short list of ...
Lars Valentin
11:05 AM Task #8040 (Closed): Impossible to produce DWCA for a number of Families
Pasquale Pagano
11:05 AM Task #7900 (Closed): Generating Darwin Core Archives via SPD
Pasquale Pagano

Jul 30, 2018

08:15 PM Task #9826 (Closed): issue sharelatex (can't compile a whole report)
It's a resources problem, that document requires more resources that we have available. Andrea Dell'Amico
05:46 PM Task #9826: issue sharelatex (can't compile a whole report)
@gianpaolo.coro@isti.cnr.it can you check this ticket please Luca Frosini
06:00 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Lars Valentin wrote:
> What I would like to ask is, how does the user then is informed in that "right click featur...
Pasquale Pagano
03:53 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Hi Francesco,
thanks for clarifying, that I just have to integrate a workflow which is defined to have a file as i...
Lars Valentin
12:41 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Lars Valentin wrote:
> Francesco Mangiacrapa wrote:
> > HI Lars,
> >
> > for your purpose the facility 'Execute ...
Francesco Mangiacrapa
05:39 PM Task #12262 (Closed): Wrong Rprofile settings for the dev workspace
I also added a default mirror site for CRAN. Andrea Dell'Amico
04:00 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Dear Andrea,
> Tuesday at 12:00? Is it OK? I'll send you a google hangouts link 10 minutes before the start.
So...
Lars Valentin
02:53 PM Task #12270 (Closed): Shutdown resource-registry until the next upgrade
Luca Frosini
02:03 PM Task #12270 (Closed): Shutdown resource-registry until the next upgrade
Luca Frosini
02:53 PM Task #12271 (Closed): Stop resource-regsitry containers
Luca Frosini
02:05 PM Task #12271 (Closed): Stop resource-regsitry containers
Actually, there are 2 instances:
resource-registry1.d4science.org
resource-registry2.d4science.org
Luca Frosini
02:45 PM Task #12272 (Closed): Deactive nagios monitoring and load-balancer on resource regsitry
Disabled both the nagios checks and the load balancer frontend and backend. Andrea Dell'Amico
02:30 PM Task #12272 (In Progress): Deactive nagios monitoring and load-balancer on resource regsitry
Andrea Dell'Amico
02:07 PM Task #12272 (Closed): Deactive nagios monitoring and load-balancer on resource regsitry
Involved instances are:
resource-registry1.d4science.org
resource-registry2.d4science.org
Luca Frosini
02:05 PM Task #12263: Restart Accounting Aggregator
Luca Frosini wrote:
> I restarted the resource-registry which is the old version (the new one cannot be used because...
Roberto Cirillo
11:58 AM Task #12263: Restart Accounting Aggregator
I restarted the resource-registry which is the old version (the new one cannot be used because it impact on all the c... Luca Frosini
11:15 AM Task #12263: Restart Accounting Aggregator
Luca Frosini wrote:
> the host was down again because orientdb refuses the connections.
>
> Can you please check...
Andrea Dell'Amico
10:57 AM Task #12263: Restart Accounting Aggregator
The container is restart every midnight because in the past it leaks memory. Every smart-executor try to connect to o... Luca Frosini
10:54 AM Task #12263: Restart Accounting Aggregator
the host was down again because orientdb refuses the connections.
Can you please check monitoring.research-infras...
Luca Frosini
10:32 AM Task #12263: Restart Accounting Aggregator
Andrea Dell'Amico wrote:
> Luca Frosini wrote:
>
> > Moreover I found that there are tentative connections from 1...
Luca Frosini
12:07 PM VM Creation #11954: VM to host the GRSF-services-updater service
Thank you @gabriele.giammatteo@eng.it Yannis Marketakis
11:54 AM VM Creation #11954: VM to host the GRSF-services-updater service
I also granted permissions to create and edit new components in the data-catalogue subsystem. I tried to add also per... Gabriele Giammatteo
11:16 AM VM Creation #11954: VM to host the GRSF-services-updater service
Thanks @gabriele.giammatteo@eng.it . I confirm I can edit the configuration.
@luca.frosini@isti.cnr.it could you ...
Yannis Marketakis
10:06 AM VM Creation #11954: VM to host the GRSF-services-updater service
Hi @marketak@ics.forth.gr, I granted you permission to edit and build the component. Let me know if it works and if y... Gabriele Giammatteo

Jul 28, 2018

02:10 PM Task #12263: Restart Accounting Aggregator
Luca Frosini wrote:
> Moreover I found that there are tentative connections from 146.48.122.24 (postgresql-srv-dev...
Andrea Dell'Amico

Jul 27, 2018

08:40 PM Task #12258: Remove old buckets
There are still the checks on accounting_service Tommaso Piccioli
07:13 PM Task #12258 (Closed): Remove old buckets
Nagios checks on accounting_storage removed Tommaso Piccioli
05:27 PM Task #12258: Remove old buckets
@tommaso.piccioli@isti.cnr.it I deleted some buckets. Can you please remove the nagios checks on the following bucke... Luca Frosini
03:12 PM Task #12258 (Paused): Remove old buckets
'accounting_service' buckets will be removed at the end of September if no other records will be found. I set the due... Luca Frosini
03:10 PM Task #12258 (In Progress): Remove old buckets
Luca Frosini
03:09 PM Task #12258: Remove old buckets
All the following buckets has been successfully removed:
accounting_storage
accounting_portlet
accounting_job
acc...
Luca Frosini
03:05 PM Task #12258 (Closed): Remove old buckets
The following buckets are empty since months.
accounting_storage
accounting_portlet
accounting_job
accounting_tas...
Luca Frosini
07:10 PM Task #12263 (Closed): Restart Accounting Aggregator
I successfully restarted orientdb and accounting-aggregator.d4science.org smartgears container.
Please note th...
Luca Frosini
07:05 PM Task #12263: Restart Accounting Aggregator
The smart-executor did not started correctly as happened for social-indexer-plugin see #12203
orientdb01-d4s denye...
Luca Frosini
06:54 PM Task #12263 (Closed): Restart Accounting Aggregator
Luca Frosini
06:23 PM Task #12257 (Closed): Restart couchbase cluster
All 8 nodes updated and restarted. Tommaso Piccioli
03:25 PM Task #12257: Restart couchbase cluster
I will do a package upgrade during this restart. Tommaso Piccioli
03:20 PM Task #12257: Restart couchbase cluster
couchbase03.d4science.org has been successfully restarted and it is up again in the cluster. Luca Frosini
03:16 PM Task #12257: Restart couchbase cluster
couchbase03.d4science.org is going to be restarted
It was running for 160 days
Luca Frosini
03:06 PM Task #12257: Restart couchbase cluster
Restarted nodes are:
couchbase02.d4science.org
couchbase04.d4science.org
couchbase07.d4science.org
couchbase0...
Luca Frosini
03:00 PM Task #12257 (Closed): Restart couchbase cluster
Luca Frosini
05:58 PM Task #12262 (Closed): Wrong Rprofile settings for the dev workspace
I've just found this piece of code into the Rprofile that we distribute:
~~~
getCredentials<-function(){
machi...
Andrea Dell'Amico
05:46 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Lars Valentin wrote:
> Andrea Dell'Amico wrote:
> > Lars Valentin wrote:
> >
> > >
> > > In the past, we have ...
Andrea Dell'Amico
05:02 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Andrea Dell'Amico wrote:
> Lars Valentin wrote:
>
> >
> > In the past, we have offered to help you with maintai...
Lars Valentin
04:47 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
Lars Valentin wrote:
>
> In the past, we have offered to help you with maintaining your KNIME installation. I su...
Andrea Dell'Amico
04:27 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins

Andrea Dell'Amico wrote:
> @lars.valentin@bfr.bund.de I see that I can download a bundle that contains all the kni...
Lars Valentin
04:09 PM Support #12249 (In Progress): Need installed KNIME 3.6 and R 3.4 including the listed plugins
About the R packages: the missing ones from your list were
~~~
miniCRAN
msm
Rserve
~~~
and they will be ava...
Andrea Dell'Amico
04:03 PM Support #12249: Need installed KNIME 3.6 and R 3.4 including the listed plugins
@lars.valentin@bfr.bund.de I see that I can download a bundle that contains all the knime extensions, but not the com... Andrea Dell'Amico
05:19 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Francesco Mangiacrapa wrote:
> HI Lars,
>
> for your purpose the facility 'Execute DM Task" is available from you...
Lars Valentin
12:46 PM Support #12250 (Feedback): so called "right click feature" to send model file from folder directly to the dataminer
HI Lars,
for your purpose the facility 'Execute DM Task" is available from your Workspace. You can call it by open...
Francesco Mangiacrapa
04:37 PM VM Creation #11954: VM to host the GRSF-services-updater service
Thanks @luca.frosini@isti.cnr.it for the prompt reaction. Unfortunately, I cannot edit it.
@mariaantonietta.dig...
Yannis Marketakis
04:30 PM VM Creation #11954: VM to host the GRSF-services-updater service
I created the component 'grsf-services-updater' under 'data-catalogue' subsystem.
Let us know if you have the righ...
Luca Frosini
04:24 PM VM Creation #11954: VM to host the GRSF-services-updater service
Thanks Luca for your reply.
I can create the configuration in ETICS.
Firstly, I have to see where I should put i...
Yannis Marketakis
10:46 AM VM Creation #11954: VM to host the GRSF-services-updater service
Hi @marketak@ics.forth.gr
the system engineer need the artefact to deploy. I mean the war. Our provisioning frame...
Luca Frosini
08:37 AM VM Creation #11954: VM to host the GRSF-services-updater service
Andrea Dell'Amico wrote:
> @marketak@ics.forth.gr is there a build for the two applications? Did you connect the sou...
Yannis Marketakis
12:36 PM Task #12090 (Feedback): Remove Edison VO scope from infrastructure-monitor
Massimiliano Assante
12:25 PM Task #12090 (In Progress): Remove Edison VO scope from infrastructure-monitor
Massimiliano Assante
11:43 AM Support #12254 (In Progress): geoserver-french-tunaatlas: strange accounting logs and high load
There should be only one FallbackMonitor thread per scope. the log evidenced that there are many.
This thread does n...
Luca Frosini
10:14 AM Support #12254 (Closed): geoserver-french-tunaatlas: strange accounting logs and high load
I see a lot of the following accounting logs on ghn.log. The load is very high (27) and no recent calls have been reg... Roberto Cirillo
10:41 AM Task #12226 (Closed): Nagios: remove replicaset checks from mongo-p-vol.d4science.org
Roberto Cirillo
10:38 AM Task #12226: Nagios: remove replicaset checks from mongo-p-vol.d4science.org
As explained here #8788 the check is working now but when the authenication will be enabled with the new SCRAM-SHA1 m... Roberto Cirillo
09:58 AM Task #12162 (Closed): Critical memory alert on GNs
geonetwork-iotcss3.d4science.org has been restarted with the new heap setting. Roberto Cirillo
09:53 AM Task #12162 (In Progress): Critical memory alert on GNs
After 15 days we have again the same problem on geonetwork-iotcss3.d4science.org.
The load is very low now and no re...
Roberto Cirillo

Jul 26, 2018

06:53 PM Task #11976: New load balancer for the tagme service
As it seems that we solved the problem with the x509 certificates, we can use services-lb.d4science.org. The rate lim... Andrea Dell'Amico
06:00 PM VRE #12251 (Released): FIT4RRI VRE
Massimiliano Assante
06:00 PM VRE #12251 (Available): FIT4RRI VRE
Everything is set, https://services.d4science.org/group/fit4rri/fit4rri Massimiliano Assante
05:54 PM VRE #12251 (In Progress): FIT4RRI VRE
Massimiliano Assante
04:59 PM VRE #12251 (Released): FIT4RRI VRE
VRE Name: FIT4RRI
VRE Description: Virtual Research Environment to support the FIT4RRI project activity – Fosterin...
Massimiliano Assante
05:58 PM Support #12250: so called "right click feature" to send model file from folder directly to the dataminer
Dear Lars, my colleague Francesco has developed this feature and will point you to the released functionality and rep... Gianpaolo Coro
04:16 PM Support #12250 (Closed): so called "right click feature" to send model file from folder directly to the dataminer
Dear @gianpaolo.coro@isti.cnr.it ,
as mentioned in the main ticket, we want to use your new so called "right-click...
Lars Valentin
05:41 PM Task #12252: VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
And now the number is 29 as I just deployed a new VRE named FIT4RRI Massimiliano Assante
05:22 PM Task #12252 (Closed): VRE Modeler FARM VO reports only 12 VREs whereas they are circa 28
The VRE list returned from the modeller here: https://services.d4science.org/group/farm/vre-manager contains 12 VREs ... Massimiliano Assante
04:58 PM Task #12227: Encoding issue on Dataminer proto 5
Gianpaolo Coro wrote:
> Hi, the tomcat had been restarted. The fact that the test works enforces my guess that there...
Andrea Dell'Amico
04:41 PM Task #12227: Encoding issue on Dataminer proto 5
Hi, the tomcat had been restarted. The fact that the test works enforces my guess that there is something at tomcat l... Gianpaolo Coro
03:10 PM Task #12227: Encoding issue on Dataminer proto 5
@gianpaolo.coro@isti.cnr.it can you run some different test? I cannot explain the behaviour, the errors start on July... Andrea Dell'Amico
03:01 PM Task #12227: Encoding issue on Dataminer proto 5
Run more than once, it never failed. Andrea Dell'Amico
02:53 PM Task #12227: Encoding issue on Dataminer proto 5
The test you posted does not fail. The xml response is:
~~~
<wps:ExecuteResponse xmlns:wps="http://www.opengis....
Andrea Dell'Amico
04:00 PM Support #12249 (Closed): Need installed KNIME 3.6 and R 3.4 including the listed plugins
Dear @gianpaolo.coro@isti.cnr.it,
as requested by @pasquale.pagano@isti.cnr.it, I opened a sub-ticket to better se...
Lars Valentin
03:45 PM VM Creation #11954 (In Progress): VM to host the GRSF-services-updater service
updater.grsf.d4science.org is running, to be deployed Tommaso Piccioli
03:34 PM VM Creation #11954: VM to host the GRSF-services-updater service
* /d4science.research-infrastructures.eu/FARM/GRSF_Admin
* /d4science.research-infrastructures.eu/FARM/GRSF
Massimiliano Assante
03:23 PM VM Creation #11954: VM to host the GRSF-services-updater service
@marketak@ics.forth.gr is there a build for the two applications? Did you connect the source to our CI service?
Andrea Dell'Amico
03:20 PM VM Creation #11954: VM to host the GRSF-services-updater service
@luca.frosini@isti.cnr.it I need the smartgears scope here. Andrea Dell'Amico
03:26 PM Task #12247 (Closed): Please upgrade collector-sa-d4s.smart-applications.area.pi.cnr.it
Looking couchbase buckets I noticed two records in the old bucket accounting_service accounted for the host
http:/...
Luca Frosini
03:10 PM Task #451 (Rejected): New VO creation for preproduction
Pasquale Pagano
03:08 PM Task #1802 (Rejected): Provide 2 new VMs for hosting Cassandra in pre production environment
Pasquale Pagano
03:07 PM Task #1802 (In Progress): Provide 2 new VMs for hosting Cassandra in pre production environment
Pasquale Pagano
03:08 PM Task #1801 (Rejected): Provide 3 new VMs for hosting CouchDB in pre production environment
Pasquale Pagano
03:07 PM Task #1801 (In Progress): Provide 3 new VMs for hosting CouchDB in pre production environment
Pasquale Pagano
03:08 PM Task #1790 (Rejected): Provide 2 new MongoDB nodes v 3.0 for preproduction environment
Pasquale Pagano
03:07 PM Task #1790 (In Progress): Provide 2 new MongoDB nodes v 3.0 for preproduction environment
Pasquale Pagano

Jul 25, 2018

08:29 PM Task #11980 (Closed): Add the involvement filter plugin to the d4science redmine instance
Done on both dev and production instances. Andrea Dell'Amico
08:21 PM Task #11980 (In Progress): Add the involvement filter plugin to the d4science redmine instance
Andrea Dell'Amico
08:08 PM Task #12235: New support.d4science.org static html page
I changed the nagios check, it now points to the `/login` URL.
Andrea Dell'Amico
08:04 PM Task #12235 (Closed): New support.d4science.org static html page
The new redmine home page is in place. Andrea Dell'Amico
06:54 PM Task #12235 (In Progress): New support.d4science.org static html page
I'm working on it right now. Expect some downtime. Andrea Dell'Amico
05:35 PM Task #12235: New support.d4science.org static html page
Please, can we proceed with this activity? If not possible, we have to change all the records published in the catalo... Pasquale Pagano
09:57 AM Task #12235 (Closed): New support.d4science.org static html page
The folder zipped here http://data.d4science.org/cWlwS2VvVmh3LzkwQm81eFEySDVPNURIeGdjT3RRalZHbWJQNStIS0N6Yz0 contains... Massimiliano Assante
06:06 PM Task #12227: Encoding issue on Dataminer proto 5
Gianpaolo Coro wrote:
> Yes, the issue is weird but this morning I have verified it is just on that machine. The pro...
Andrea Dell'Amico
02:26 PM Task #12241 (Rejected): Setup New gateway open-science.it
We need to setup a new gateway on liferay cluster and that would respond to https://open-science.it
Please start b...
Massimiliano Assante
09:48 AM Task #12226 (In Progress): Nagios: remove replicaset checks from mongo-p-vol.d4science.org
Roberto Cirillo

Jul 24, 2018

11:48 PM Task #12227: Encoding issue on Dataminer proto 5
Yes, the issue is weird but this morning I have verified it is just on that machine. The process that highlighted the... Gianpaolo Coro
04:25 PM Task #12227 (In Progress): Encoding issue on Dataminer proto 5
I just compared the relevant parts of dataminer4-proto and dataminer5-proto without founding any difference:
* env...
Andrea Dell'Amico
12:10 PM Task #12227: Encoding issue on Dataminer proto 5
For the time being, we are going to stop dataminer5-proto in order to make the NLP Hub work. Gianpaolo Coro
11:48 AM Task #12227 (Closed): Encoding issue on Dataminer proto 5
I have a difficult issue on one of the prototype Dataminers for which I need help:
There are several algorithms o...
Gianpaolo Coro
06:25 PM Task #12226: Nagios: remove replicaset checks from mongo-p-vol.d4science.org
Specific nagios group created to check standalone mongodb implementation.
Waiting for a user "nagios" to run the aut...
Tommaso Piccioli
10:10 AM Task #12226 (Closed): Nagios: remove replicaset checks from mongo-p-vol.d4science.org
mongo-p-vol.d4science.org VM hosts a standalone mongodb instance.
The replicaset nagios check are not compatible w...
Roberto Cirillo
03:10 PM Task #12058 (Closed): IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector
Roberto Cirillo
11:09 AM Task #12008 (Rejected): grsf-publisher deployed on gcube-staging repo doesn't work
Luca Frosini
11:02 AM Incident #12203: News Feed search function returns result up to mid June 2018
I confirm that now the search works with the latest posts of July as well. Massimiliano Assante
10:32 AM Incident #12203 (Closed): News Feed search function returns result up to mid June 2018
The smart-executor was not restarted correctly because it was not able to connect to orientdb (orientdb01-d4s.d4scien... Luca Frosini
09:56 AM Incident #12203: News Feed search function returns result up to mid June 2018
any update? Roberto Cirillo
11:00 AM Incident #12063 (Closed): Storage Hub Recent Documents do not get updated in SoBigData.eu VRE
Yes, the problem is fixed with the rollout of the gCube 4.12 release (although it takes up to 10 seconds to get the r... Massimiliano Assante
10:14 AM Incident #12063: Storage Hub Recent Documents do not get updated in SoBigData.eu VRE
Is this problem solved? @massimiliano.assante@isti.cnr.it @lucio.lelii@isti.cnr.it Roberto Cirillo
09:47 AM Incident #12178 (Closed): MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
Roberto Cirillo

Jul 23, 2018

06:52 PM Task #12110 (Closed): DataMiner - Check the version of R on the DataMiner services so that the version is 3.4 everywhere
Done. Andrea Dell'Amico
06:48 PM Task #12110: DataMiner - Check the version of R on the DataMiner services so that the version is 3.4 everywhere
The upgrade is running. Andrea Dell'Amico
06:42 PM Task #12110 (In Progress): DataMiner - Check the version of R on the DataMiner services so that the version is 3.4 everywhere
Andrea Dell'Amico
04:37 PM Task #12183 (Closed): Please add nagios check to monitor the correct functioning of social networking service
They are working. Andrea Dell'Amico
04:23 PM Task #12183 (Feedback): Please add nagios check to monitor the correct functioning of social networking service
I also added the system checks, they were missing too. Andrea Dell'Amico
04:01 PM Task #12183 (In Progress): Please add nagios check to monitor the correct functioning of social networking service
Andrea Dell'Amico
04:20 PM Upgrade #12222 (Completed): D4Science Gateway 2nd upgrade to gCube 4.12.0
Massimiliano Assante
04:14 PM Upgrade #12222: D4Science Gateway 2nd upgrade to gCube 4.12.0
@dkatris@di.uoa.gr the upgrade of the visualise portlets has been completed Massimiliano Assante
03:34 PM Upgrade #12222 (In Progress): D4Science Gateway 2nd upgrade to gCube 4.12.0
Massimiliano Assante
11:47 AM Upgrade #12222 (Completed): D4Science Gateway 2nd upgrade to gCube 4.12.0
The upgrade does not require downtime and it will deploy the updated versions of the following components:
* portl...
Massimiliano Assante

Jul 20, 2018

02:20 PM Incident #12214 (Closed): DataMiners cannot interact with the Storage System
Yes, it seems that everything works correctly. I close this ticket. Giancarlo Panichi
12:54 PM Incident #12214 (Feedback): DataMiners cannot interact with the Storage System
The disk space on the volatile mongo instance has been incremented and the server restarted. Does it solve the datami... Andrea Dell'Amico
12:53 PM Incident #12214 (In Progress): DataMiners cannot interact with the Storage System
Andrea Dell'Amico
12:29 PM Incident #12214: DataMiners cannot interact with the Storage System
I see that the mongo instance on that server is down.
So: we do not have monitoring of those instances, it seems....
Andrea Dell'Amico
12:20 PM Incident #12214 (Closed): DataMiners cannot interact with the Storage System
No DM is currently working in any VRE because they get errors when interacting with the Storage system. The issue is ... Gianpaolo Coro
02:16 PM Incident #12213 (Closed): Algorithms not installed on dataminer1-proto
Giancarlo Panichi
02:16 PM Incident #12213 (Resolved): Algorithms not installed on dataminer1-proto
Giancarlo Panichi
01:12 PM Incident #12213: Algorithms not installed on dataminer1-proto
Yes, I was working on it. Now, MongoDB has also started up and it seems that everything works correctly. Giancarlo Panichi
12:21 PM Incident #12213 (In Progress): Algorithms not installed on dataminer1-proto
I just removed the list of installed algorithms but I see that the cron job execution has been commented out.
I also...
Andrea Dell'Amico
12:13 PM Incident #12213 (Closed): Algorithms not installed on dataminer1-proto
Algorithms are not installed on this machine, like the last part of the installation did not run after the latest upg... Gianpaolo Coro
12:50 PM Task #12215 (Closed): Increase disk space on mongo-p-vol.d4science.org
mongo-p-vol restarted with 3 GB of memory and 200 GB of storage Tommaso Piccioli
12:38 PM Task #12215 (Closed): Increase disk space on mongo-p-vol.d4science.org
The mongo-p-vol.d4science.org stopped itself because there's enough space in `/data`
Also, for some reason that I...
Andrea Dell'Amico

Jul 19, 2018

09:38 PM Incident #12203: News Feed search function returns result up to mid June 2018
I' ve restart the resource registry instances during gCube 4.12 release, I'm not sure if that's related. However this... Roberto Cirillo
12:46 PM Incident #12203: News Feed search function returns result up to mid June 2018
Nope, still nothing after Mid-End of June (the latest hit i could get is of June 25th) Massimiliano Assante
12:40 PM Incident #12203: News Feed search function returns result up to mid June 2018
This service has not been upgraded during gCube 4.12. I've tried to restart it. Please, could you check if it works n... Roberto Cirillo
11:52 AM Incident #12203 (Closed): News Feed search function returns result up to mid June 2018
It seems that News Feed search function returns result up to mid February 2018, after that no results are returned. I... Massimiliano Assante
05:00 PM Task #11831: Explore new letsencrypt clients to add wildcard certificates support
We have a wildcard certificate, at last Andrea Dell'Amico
04:52 PM VRE #12171 (Released): Create a VRE for ICDI
Leonardo Candela
04:51 PM VRE #12171 (Available): Create a VRE for ICDI
The VRE is available at https://services.d4science.org/group/icdi Leonardo Candela
04:35 PM VRE #12171 (In Progress): Create a VRE for ICDI
Leonardo Candela
03:59 PM VRE #12171 (Planned): Create a VRE for ICDI
Leonardo Candela
03:58 PM VRE #9232 (Released): Create a VRE for EOSCpilot TextCrowd use case
Leonardo Candela

Jul 18, 2018

06:07 PM Incident #12178: MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
The patch is being distributed on the gateways Massimiliano Assante
10:32 AM Incident #12178 (Feedback): MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
Roberto Cirillo
10:01 AM Incident #12178 (In Progress): MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
I see that the problem is still there. I'm going to investigate, anyway this is just a log issue not a real problem. Roberto Cirillo
04:53 PM Support #12179 (Closed): Aquamaps still run with Java7
OK, thanks Fabio. I'm going to close this ticket. Roberto Cirillo
04:39 PM Support #12179 (Feedback): Aquamaps still run with Java7
No problem has been found while testing the portlets from BiodiversityLab and AquaMaps VREs.
I suggest to keep the c...
Fabio Sinibaldi
03:51 PM Incident #12176 (Closed): garr site is not reachable
The problem has been solved by the GARR technical support. It seems that it was caused by a problem on the Neutron ga... Andrea Dell'Amico
03:46 PM Task #12183: Please add nagios check to monitor the correct functioning of social networking service
Is it possible to have a *machine* token? we should not rely on personal tokens for the monitoring checks. Andrea Dell'Amico
12:50 PM Task #12183 (Closed): Please add nagios check to monitor the correct functioning of social networking service
Here's 2 REST Calls that should be performed every 10 minutes, each of the calls need a user token of one VRE of your... Massimiliano Assante
03:15 PM Task #12173 (Closed): Suspend all the letsencrypt certificates renewals for 15 days
All the hosts on the d4science.org domain have been reconfigured. The situation can be monitored here: https://crt.sh... Andrea Dell'Amico
03:14 PM Incident #12182 (Closed): Social Networking service not working
The service seem to work now. Thanks Massimiliano Assante
12:51 PM Incident #12182: Social Networking service not working
I see a Too Many Open File exception. I'm going to investigate. Roberto Cirillo
12:50 PM Incident #12182 (In Progress): Social Networking service not working
Roberto Cirillo
12:29 PM Incident #12182 (Closed): Social Networking service not working
Any call to the social networking service generate t
HTTP Status 500 - Cannot call sendError() after the response ...
Massimiliano Assante

Jul 17, 2018

09:03 PM Upgrade #12113 (Completed): D4Science Gateway upgrade to gCube 4.12.0
Massimiliano Assante
09:02 PM Upgrade #12113 (In Progress): D4Science Gateway upgrade to gCube 4.12.0
Massimiliano Assante
09:02 PM Upgrade #12113 (Planned): D4Science Gateway upgrade to gCube 4.12.0
Massimiliano Assante
07:32 PM Task #12173: Suspend all the letsencrypt certificates renewals for 15 days
Reconfigured all the servers but the ones still unreachable at garr-ct1.
Andrea Dell'Amico
05:23 PM Task #12173 (In Progress): Suspend all the letsencrypt certificates renewals for 15 days
The cron job has been modified, so that we can specify the days of month (I set 1-15 for our servers) while the hour ... Andrea Dell'Amico
07:23 PM Support #12179 (Closed): Aquamaps still run with Java7
This service cannot be upgraded because 4.12 has builded in java8.
Please check if it works without any upgrade of s...
Roberto Cirillo
07:15 PM Incident #12178 (Rejected): MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
There was an upgrade on going. Re-open this ticket if the problem happen again Roberto Cirillo
06:58 PM Incident #12178 (Closed): MongoOperationManager - primary db not discovered. Backend will be instantiated with default value
Since the upgrade today the logs in the gateway server are filled with this warning:
~~~
[PORTAL] 647936 [Species...
Massimiliano Assante
07:09 PM Upgrade #12019 (In Progress): D4Science Infrastructure Upgrade to gCube 4.12.0
Roberto Cirillo
07:08 PM Upgrade #12019 (Planned): D4Science Infrastructure Upgrade to gCube 4.12.0
Roberto Cirillo
07:06 PM Upgrade #12150 (Completed): gCubeApps VO upgrade to gCube 4.12
Roberto Cirillo
04:17 PM Upgrade #12150 (In Progress): gCubeApps VO upgrade to gCube 4.12
Roberto Cirillo
06:53 PM Incident #12134: Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
Folks, I have modified the version of DM pool manager in dev environment to get SVN credentials from the IS. In parti... Ciro Formisano
06:41 PM Task #12118 (Closed): MongoDB: upgrade production cluster to version 3.4
Roberto Cirillo
03:46 PM Task #12118 (Feedback): MongoDB: upgrade production cluster to version 3.4
All nodes, included mongo-p-vol.d4science.org, updated to mongodb-org version 3.4.16 Tommaso Piccioli
03:15 PM Task #12118 (In Progress): MongoDB: upgrade production cluster to version 3.4
Tommaso Piccioli
06:40 PM Upgrade #12151 (Completed): D4Research VO upgrade to gCube 4.12
Roberto Cirillo
04:18 PM Upgrade #12151 (In Progress): D4Research VO upgrade to gCube 4.12
Roberto Cirillo
06:40 PM Upgrade #12149 (Completed): FARM VO upgrade to gCube 4.12
Roberto Cirillo
04:17 PM Upgrade #12149 (In Progress): FARM VO upgrade to gCube 4.12
Roberto Cirillo
06:39 PM Upgrade #12116 (Completed): D4Science Root VO upgrade to gCube 4.12
Roberto Cirillo
01:10 PM Upgrade #12116 (In Progress): D4Science Root VO upgrade to gCube 4.12
Roberto Cirillo
03:45 PM Task #12117: MongoDB: upgrade production cluster to version 3.2
All nodes temporarily updated to mongodb-org version 3.2.20 Tommaso Piccioli
03:15 PM Task #12117 (Closed): MongoDB: upgrade production cluster to version 3.2
Tommaso Piccioli
01:11 PM Task #12117 (In Progress): MongoDB: upgrade production cluster to version 3.2
Roberto Cirillo
12:20 PM Incident #12176 (In Progress): garr site is not reachable
The problem is under investigation by the GARR people.
Andrea Dell'Amico
10:42 AM Incident #12176 (Closed): garr site is not reachable
I'm not able to connect to any garr host Roberto Cirillo

Jul 16, 2018

07:15 PM Task #12173: Suspend all the letsencrypt certificates renewals for 15 days
Better yet, change the cron job to run only in the first 10/15 days of the month so that we will always have a free w... Andrea Dell'Amico
07:00 PM Task #12173 (Closed): Suspend all the letsencrypt certificates renewals for 15 days
Let's suspend all the certificates renewals for 15 days, so that we can have a window where we can ask for new certif... Andrea Dell'Amico
04:15 PM Task #11976: New load balancer for the tagme service
Some resources:
https://gist.github.com/jeremyj/e964a951634f1997daea
https://serverfault.com/questions/555763/hapro...
Andrea Dell'Amico
04:07 PM Task #12157 (Closed): Change the resolv.conf and dhclient.conf configurations on all the GARR instances
I just changed the network configuration on both the GARR regions. The new resolvers should be active in the next 24 ... Andrea Dell'Amico
03:23 PM Task #12157 (In Progress): Change the resolv.conf and dhclient.conf configurations on all the GARR instances
Never mind. The DNS servers provided by the DHCP service can be changed editing the `subnet` configuration from the O... Andrea Dell'Amico
02:57 PM Upgrade #12151 (Planned): D4Research VO upgrade to gCube 4.12
Roberto Cirillo
02:56 PM Upgrade #12150 (Planned): gCubeApps VO upgrade to gCube 4.12
Roberto Cirillo
02:54 PM Upgrade #12149 (Planned): FARM VO upgrade to gCube 4.12
Roberto Cirillo
02:53 PM Upgrade #12116 (Planned): D4Science Root VO upgrade to gCube 4.12
Roberto Cirillo
12:56 PM VRE #12171 (Released): Create a VRE for ICDI

A VRE for supporting the activities of the ICDI initiative will be created. Such a VRE will contain the basic servi...
Leonardo Candela
09:47 AM Task #12169 (Closed): Provide the new dataminer library for dataminer prototypes cluster
The prototypes cluster needs a different job's queue value.
Could you execute a remote build in order to have, just ...
Roberto Cirillo

Jul 13, 2018

04:50 PM Incident #12124 (Closed): Sth wrong with user leonardo.candela and AGINFRA+ Gateway VREs
The Limit set to 99 for the max number of VRE do display in the GoTo has been raised to 160 and this fixed the issue. Massimiliano Assante
02:51 PM Incident #12124 (In Progress): Sth wrong with user leonardo.candela and AGINFRA+ Gateway VREs
The problem occurred today for pasquale.pagano on SBD Gateway Massimiliano Assante

Jul 12, 2018

07:10 PM Task #12162 (Closed): Critical memory alert on GNs
Both the services have been restated. Now the situation is back to normal. I'm going to close this ticket. Roberto Cirillo
06:35 PM Task #12162 (Closed): Critical memory alert on GNs
Various instances of GeoNetwork report a critical Memory Usage. Please invesitgate and take action.
Reported problem...
Fabio Sinibaldi
02:22 PM Support #12115 (Closed): User Management and wrong Acceptance Manager details
The only thing we can do is to ask @p.koltsida@di.uoa.gr to remove the Acceptance Manager column of the table. Please... Massimiliano Assante

Jul 11, 2018

05:46 PM Task #12156 (Closed): registry-parthenosvo.d4science.org: add nagios checks
Done. I also added checks for collector-parthenosvo.d4science.org.
Andrea Dell'Amico
05:02 PM Task #12156 (Closed): registry-parthenosvo.d4science.org: add nagios checks
The VM above is still not monitored by nagios.
It's needed to add the standard nagios checks as done for other IS-R...
Roberto Cirillo
05:43 PM Task #12157 (Closed): Change the resolv.conf and dhclient.conf configurations on all the GARR instances
To permanently change the resolvers on the GARR instances we need to modify the dhclient configuration, otherwise the... Andrea Dell'Amico
05:33 PM Task #3262 (Closed): Change the ldap authentication for the d4science subversion repository
The redbox access has been switched too. The authorized group is `cn=redbox_repo,ou=Groups,dc=d4science,dc=org`
Andrea Dell'Amico
01:37 PM Task #12154: Switch hosts from d4science.org to d4science.net
tabulardata-devnext-d.dev.d4science.org: VM and IP deleted Tommaso Piccioli
12:51 PM Task #12154: Switch hosts from d4science.org to d4science.net
tabulardata-devsec.d4science.org could be switched to tabulardata-devsec.d4science.net because the db is hosted on: p... Roberto Cirillo
11:17 AM Task #12154 (Closed): Switch hosts from d4science.org to d4science.net
This ticket would keep track of all the hosts that could be switched to the new domain "d4science.net".
First list...
Roberto Cirillo
12:31 PM Task #12155 (Closed): Move all development servers to .net domain
All the servers allocated to dev and pre including databases and storage backends have to be moved to .net.
Please...
Pasquale Pagano
11:14 AM Task #11825 (Closed): Setup New gateway performfish.d4science.net
Massimiliano Assante

Jul 10, 2018

05:52 PM Task #11825: Setup New gateway performfish.d4science.net
and the gateway is up and running
https://performfish.d4science.net
Massimiliano Assante
05:49 PM Task #11825: Setup New gateway performfish.d4science.net
The certificate is ready and installed. Andrea Dell'Amico
05:11 PM Task #11825: Setup New gateway performfish.d4science.net
@andrea.dellamico@isti.cnr.it please let us know when the certificate for https://performfish.d4science.net/ is ready Massimiliano Assante
05:05 PM Task #11825: Setup New gateway performfish.d4science.net
As we are not able to obtain a certificate under the d4science.org domain, has just been decided to use the `performf... Andrea Dell'Amico
04:53 PM Task #11825: Setup New gateway performfish.d4science.net
Hi all, people of PerformFish are pushing to have the portal available with the SSL certificate. When can we make it ... Gianpaolo Coro
03:24 PM Upgrade #12151: D4Research VO upgrade to gCube 4.12
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** spd2.d4science.org
* **(CNR) DONE** tabulardata2.d4scien...
Roberto Cirillo
03:04 PM Upgrade #12151 (Completed): D4Research VO upgrade to gCube 4.12
Roberto Cirillo
03:22 PM Upgrade #12150: gCubeApps VO upgrade to gCube 4.12
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** spd1.d4science.org
* **(CNR) DONE** tabulardata1.d4scien...
Roberto Cirillo
03:03 PM Upgrade #12150 (Completed): gCubeApps VO upgrade to gCube 4.12
Roberto Cirillo
03:20 PM Upgrade #12149: FARM VO upgrade to gCube 4.12
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** smart-grsf-d4s.d4science.org
* **(CNR) DONE** spd2.d4sci...
Roberto Cirillo
03:02 PM Upgrade #12149 (Completed): FARM VO upgrade to gCube 4.12
Roberto Cirillo
12:23 PM Incident #12134 (Closed): Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
Ok, now it works. I close the ticket. Giancarlo Panichi
12:04 PM Incident #12134: Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
I've found the problem. The ldap users were filtered using the `posixAccount` objectclass. I did not add that object ... Andrea Dell'Amico
11:40 AM Incident #12134: Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
There is an authentication problem for the svn.d4science user, on dm-pool-manager-* service:
~~~
gcube@dm-pool-ma...
Giancarlo Panichi
11:21 AM Incident #12134: Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
according to @g.panichi@isti.cnr.it the issue isn't solved, either the password is not the previous one (unlikely) or... Massimiliano Assante
11:46 AM Task #12118: MongoDB: upgrade production cluster to version 3.4
It's also needed to upgrade the volatile area hosted on mongo-p-vol.d4science.org. This instance is running with 3.2.... Roberto Cirillo
09:47 AM Upgrade #12023 (Completed): /gcube/preprod upgrade to gCube 4.12
Roberto Cirillo
09:14 AM Incident #12086 (Closed): ssk.parthenos-project.eu disappeared
Achille Felicetti
09:12 AM Incident #12086: ssk.parthenos-project.eu disappeared
The issue was due to a transfer of domain during which the ssk subdomain was lost. I recreated it and set the CNAME r... Achille Felicetti

Jul 09, 2018

07:57 PM Incident #12134 (Feedback): Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
I've added the user, with the password used by the dm pool manager.
Andrea Dell'Amico
07:56 PM Incident #12134 (In Progress): Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
Andrea Dell'Amico
12:51 PM Incident #12134 (Closed): Missing SVN user "svn.d4science" in D4Science LDAP causes block of automatic DataMiner algorithms deployment on production
The automatic deployment of DataMiner algorithms on production is stuck because in the cose it is used the "svn.d4sci... Massimiliano Assante
06:18 PM Task #11333 (Closed): Reconfigure jenkins-dnet.d4science.org to authenticate against ldap.d4science.org
Andrea Dell'Amico
06:17 PM Task #11333 (In Progress): Reconfigure jenkins-dnet.d4science.org to authenticate against ldap.d4science.org
Done. We should try to use ldap groups to enlist the authorized users. Andrea Dell'Amico
04:26 PM Incident #12086: ssk.parthenos-project.eu disappeared
Any news? The certificate is going to expire in three weeks, if there are no plans to restore `ssk.parthenos-project.... Andrea Dell'Amico
03:04 PM Incident #12124 (Closed): Sth wrong with user leonardo.candela and AGINFRA+ Gateway VREs
It seems the issue was related to the fact the the user had too many VREs associated to his account (138). Reducing t... Massimiliano Assante
11:05 AM Incident #12124 (In Progress): Sth wrong with user leonardo.candela and AGINFRA+ Gateway VREs
Massimiliano Assante
11:01 AM Incident #12124 (Closed): Sth wrong with user leonardo.candela and AGINFRA+ Gateway VREs
Only in the gateway reported in the subject the user leonardo.candela has the following exception
~~~
VM630:1 ...
Massimiliano Assante
02:42 PM VM Creation #12053 (Closed): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
The SBD catalogue seems work in all scopes Francesco Mangiacrapa
01:17 PM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
Done. The scopes are now:
~~~
/d4science.research-infrastructures.eu/SoBigData
/d4science.research-infrastructur...
Andrea Dell'Amico
12:01 PM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
I just added the scope to the list in the ansible variables. Let me know when I can reconfigure the connector.
Andrea Dell'Amico
10:44 AM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
Thanks @tommaso.piccioli@isti.cnr.it and @andrea.dellamico@isti.cnr.it now the catalogue works fine at https://sobigd... Francesco Mangiacrapa
10:32 AM Upgrade #12112 (Completed): D4Science Preprod Gateway upgrade to gCube 4.12.0
The preproduction portal is updated to gCube 4.12, @mariaantonietta.digirolamo@eng.it could you set up the functional... Massimiliano Assante

Jul 07, 2018

07:03 PM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
I restarted the connnector container in this moment, if you can check it... Tommaso Piccioli
05:10 PM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
I fixed the redirection yesterday. About the missing scope the only action I know is a restart of the container but I... Andrea Dell'Amico
03:21 PM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
The CkanConnector seems undeployed (is missing) in that scope (/d4science.research-infrastructures.eu/SoBigData/Resou... Francesco Mangiacrapa
08:25 AM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
I cannot access the catalogue anymore. I attached an image reporting the error Pasquale Pagano

Jul 06, 2018

09:46 PM VM Creation #12053 (Feedback): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
Hostname has been switched. @roberto.cirillo@isti.cnr.it fixed all the endpoint, the connector configuration has been... Andrea Dell'Amico
11:11 AM VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net
I noticed that 3 items were added to old catalogue (https://ckan-sobigdata.d4science.org/) so their should be added t... Francesco Mangiacrapa
07:30 PM Task #12122 (Closed): Please Create parthenos.aggregator@d4science.org alias email address
Created as open mailing list
Contents of the parthenos.aggregator@d4science.org mailing list
pasquale.pagano@i...
Tommaso Piccioli
07:18 PM Task #12122 (In Progress): Please Create parthenos.aggregator@d4science.org alias email address
Andrea Dell'Amico
07:14 PM Task #12122: Please Create parthenos.aggregator@d4science.org alias email address
Then let's go for `parthenos.aggregator@d4science.org` as Luca already suggested. How can a ticket be "unrejected"? Alessia Bardi
06:56 PM Task #12122 (Rejected): Please Create parthenos.aggregator@d4science.org alias email address
Massimiliano Assante
06:55 PM Task #12122: Please Create parthenos.aggregator@d4science.org alias email address
The email is taken and used from the PARTHENOS gateway (as sender and as mailbox where to get replies and likes from ... Massimiliano Assante
06:39 PM Task #12122: Please Create parthenos.aggregator@d4science.org alias email address
parthenos@d4science.org exists as mailbox because it was requested by @massimiliano.assante@isti.cnr.it
@massimili...
Luca Frosini
03:56 PM Task #12122 (Closed): Please Create parthenos.aggregator@d4science.org alias email address
The alias email address should be pointed to:
* pasquale.pagano@isti.cnr.it
* alessia.bardi@isti.cnr.it
* luca.fro...
Luca Frosini
05:25 PM Task #11825: Setup New gateway performfish.d4science.net
I'm still waiting for at least a day without the embargo. I cannot foresee it, I don't know how many certifcates are ... Andrea Dell'Amico
04:02 PM Task #11825: Setup New gateway performfish.d4science.net
The PerformFISH Gateway is ready, https://performfish.d4science.org however we are still waiting for the SSL Certific... Massimiliano Assante
04:11 PM Task #11831: Explore new letsencrypt clients to add wildcard certificates support
Any news on this, we would need to go LIVE soon with https://performfish.d4science.org Massimiliano Assante
03:39 PM Task #12121 (Closed): Enable Google and LinkedIn SSO on PerformFISH Gateway PerformFISH
Massimiliano Assante
03:34 PM Task #12121 (Closed): Enable Google and LinkedIn SSO on PerformFISH Gateway PerformFISH
Massimiliano Assante
03:33 PM Task #12098 (Closed): Production Gateways PerformFISH Site creation and Theme
Massimiliano Assante
12:01 PM Upgrade #12112 (In Progress): D4Science Preprod Gateway upgrade to gCube 4.12.0
Massimiliano Assante
10:07 AM Upgrade #12023 (In Progress): /gcube/preprod upgrade to gCube 4.12
Roberto Cirillo
04:48 AM VM Creation #12030 (Closed): Upgrade VM with Resource Registry instance
All my unit tests passed and I can ssh the node. Also, the installation looks good for what I can tell.
Thanks!
Manuele Simi

Jul 05, 2018

07:31 PM Task #11332 (Closed): Change the openaire redmine instance to use ldap.d4science.org for the authentication
Done. The migration is complete, the old ldap service removed from the redmine configuration.
Andrea Dell'Amico
05:19 PM Task #11332 (In Progress): Change the openaire redmine instance to use ldap.d4science.org for the authentication
Andrea Dell'Amico
06:28 PM Task #3262: Change the ldap authentication for the d4science subversion repository
Also moved all the gcore/gcube repositories.
The last one to be handled is RedBox.
Andrea Dell'Amico
05:18 PM Task #3262 (In Progress): Change the ldap authentication for the d4science subversion repository
The D-Net subversion instance now authenticates against ldap.d4science.org.
I'm waiting for the confirmation of the...
Andrea Dell'Amico
05:00 PM VM Creation #12030: Upgrade VM with Resource Registry instance
Manuele Simi wrote:
> Andrea Dell'Amico wrote:
> > Done. Can you check?
>
> Thanks. I don't have chance to check...
Andrea Dell'Amico
04:44 PM VM Creation #12030: Upgrade VM with Resource Registry instance
Andrea Dell'Amico wrote:
> Done. Can you check?
Thanks. I don't have chance to check the node right now. I will d...
Manuele Simi
04:41 PM VM Creation #12030: Upgrade VM with Resource Registry instance
Done. Can you check?
Andrea Dell'Amico
04:07 PM VM Creation #12030: Upgrade VM with Resource Registry instance
(sorry, wrong ticket).
I'm going to reinstall the services right now.
Andrea Dell'Amico
03:41 PM VM Creation #12030: Upgrade VM with Resource Registry instance
I manually added those jars for the reasons I explained few comments earlier.
Anyway, @andrea.dellamico@isti.cnr.i...
Manuele Simi
02:38 PM VM Creation #12030: Upgrade VM with Resource Registry instance
Manuele Simi wrote:
> Luca Frosini wrote:
> > The jar must be already present in smartgears, that's why it is not i...
Luca Frosini
01:23 PM VM Creation #12030: Upgrade VM with Resource Registry instance
Luca Frosini wrote:
> The jar must be already present in smartgears, that's why it is not included in resource-regis...
Manuele Simi
12:55 PM VM Creation #12030: Upgrade VM with Resource Registry instance
The jar must be already present in smartgears, that's why it is not included in resource-registry.
How old is the sm...
Luca Frosini
03:36 PM Task #12118 (Closed): MongoDB: upgrade production cluster to version 3.4
The upgrade will be done in the following way:
* Upgrade secondary members of the replica set;
* Step down the re...
Roberto Cirillo
03:33 PM Task #12117 (Closed): MongoDB: upgrade production cluster to version 3.2
The upgrade will be done in the following way:
* Upgrade secondary members of the replica set;
* Step down the re...
Roberto Cirillo
03:25 PM Upgrade #12116: D4Science Root VO upgrade to gCube 4.12
**HostingNode**
*WHN to upgrade*
* **POSTPONED** catalogue-ws.d4science.org
* **(CNR) DONE** all the instanc...
Roberto Cirillo
03:02 PM Upgrade #12116 (Completed): D4Science Root VO upgrade to gCube 4.12
Roberto Cirillo
02:44 PM Support #12115: User Management and wrong Acceptance Manager details
Just to showcase what I was reporting ... please find the attached images. Leonardo Candela
02:34 PM Support #12115: User Management and wrong Acceptance Manager details

I do not want to enter into any technical discussion here, since the current information is completely misleading a...
Leonardo Candela
12:37 PM Support #12115 (Feedback): User Management and wrong Acceptance Manager details
Either we don't show the value or I don't see any other option. Unfortunately Liferay has no support for user auto r... Massimiliano Assante
12:30 PM Support #12115 (Closed): User Management and wrong Acceptance Manager details
The information reported in the last column of the user management portlet is really misleading.
Dunno where this...
Leonardo Candela
01:33 PM Docker Image #12035 (Closed): Please deploy a Docker container with the "out of the box" LimeSurvey community version
This is excellent news! Thanks everyone Massimiliano Assante
01:27 PM Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version
We seem to have been able to solve the issue with the mail sending capability: my colleague Claudio has set up a dedi... Maggie Hellström
12:35 PM Task #11732 (Closed): Please install apa6 CTAN package on ShareLaTex
Luca Frosini
12:34 PM Task #11732: Please install apa6 CTAN package on ShareLaTex
It seems not working as I expected.
Just adding
~~~
\usepackage{apacite}
~~~
The compilation provides a lot...
Luca Frosini
10:41 AM Upgrade #12112 (Planned): D4Science Preprod Gateway upgrade to gCube 4.12.0
Massimiliano Assante
10:39 AM Upgrade #12112 (Completed): D4Science Preprod Gateway upgrade to gCube 4.12.0
Massimiliano Assante
10:41 AM Upgrade #12113 (Completed): D4Science Gateway upgrade to gCube 4.12.0
Massimiliano Assante
 

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