Activity

From Apr 12, 2017 to May 11, 2017

May 11, 2017

08:39 PM Support #8489: Issues memory (R Studio ): Can you point me to the rstudio instance? I didn't nee any stale process, so maybe we need to investigate more.
Andrea Dell'Amico
04:13 PM Support #8489 (Closed): Issues memory (R Studio ): Dear Andrea,
the same issue described in the ticket 'Support #8322' is happened today:
We get memory allocation er... TAHA IMZILEN
08:15 PM VM Creation #8486 (Feedback): Provide a new SmartGears node for resource-checker plugin: The VM has been configured. I see exceptions in the ghn.log file but I don't know what's wrong:
~~~
20:09:31.476 ... Andrea Dell'Amico
07:44 PM VM Creation #8486 (In Progress): Provide a new SmartGears node for resource-checker plugin: resource-checker.d4science.org 146.48.123.124 Andrea Dell'Amico
09:38 AM VM Creation #8486 (Closed): Provide a new SmartGears node for resource-checker plugin: It's needed to provide a new VM with the same requirement reported here #8197 for production environment Roberto Cirillo
07:44 PM VM Creation #8472 (In Progress): New VM dataminer needed: dataminer-proto-ghost.d4science.org 146.48.123.125 Andrea Dell'Amico
07:31 PM VM Creation #8316 (Closed): new VM for sharelatex in dev: Andrea Dell'Amico
07:20 PM Task #8426 (Feedback): Dataminer service to test : dataminer2-d-d4s.d4science.org: Tomcat is running with java 8.
Andrea Dell'Amico
07:19 PM Task #8426 (In Progress): Dataminer service to test : dataminer2-d-d4s.d4science.org: Andrea Dell'Amico
07:19 PM Task #8424 (Feedback): Dataminer service to test : dataminer1-d-d4s.d4science.org.: tomcat is running with java 8.
Andrea Dell'Amico
07:14 PM Task #8424 (In Progress): Dataminer service to test : dataminer1-d-d4s.d4science.org.: Andrea Dell'Amico
07:18 PM Task #8461 (Closed): Check social-data-indexer-se-plugin installation on node22.d4science.org: Ok, I've fixed the pom.xml and added a couple more of dependencies. Now it is running ok on node22 Costantino Perciante
02:15 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: Ok, I've fixed the range and let etics build it. I've put it into node22 and now I get the same error (java.lang.NoCl... Costantino Perciante
07:11 PM Task #8439 (Feedback): ckan-connector to test : ckan-d-d4s.d4science.org: Done. Andrea Dell'Amico
07:08 PM Task #8439 (In Progress): ckan-connector to test : ckan-d-d4s.d4science.org: Andrea Dell'Amico
07:08 PM Task #8435: tabular-data-manager service to update : gcube@node7.d.d4science.research-infrastructures.eu: Same as #8442 Andrea Dell'Amico
07:04 PM Task #8442: Authorization Service to update : auth@node7.d.d4science.research-infrastructures.eu: node7.d.d4science.research-infrastructures.eu is running ubuntu 12.04 so we cannot just install java 8: we need Ubunt... Andrea Dell'Amico
06:57 PM Task #8443: Home Library Webapp to test : node11.d.d4science.research-infrastructures.eu: This one is also manually provisioned. java8 is the default already, the smartgears configuration needs to be modifie... Andrea Dell'Amico
06:51 PM Task #8444 (Feedback): sdi-service to test : sdi-d-d4s.d4science.org: Tomcat is now running with java8.
Andrea Dell'Amico
06:50 PM Task #8444 (In Progress): sdi-service to test : sdi-d-d4s.d4science.org: Andrea Dell'Amico
06:43 PM Task #8445: FHNManager Service to test : node2-d-d4s.d4science.org: Same as #8446 Andrea Dell'Amico
06:40 PM Task #8446: DataManager Pool Manager Service to test : node2-d-d4s.d4science.org: In this VM smartgears was manually installed, it's running the bundle.
That's against our policies, I'm not touchin... Andrea Dell'Amico
06:36 PM Support #8498 (In Progress): Adding SSH keys to RPrototypingLab VRE: Sorry, you are supposed to reach the new to be created dataminer host in production, and a dev dataminer for the deve... Andrea Dell'Amico
06:18 PM Support #8498 (Feedback): Adding SSH keys to RPrototypingLab VRE: Done. Andrea Dell'Amico
06:12 PM Support #8498: Adding SSH keys to RPrototypingLab VRE: from gcube@node2-d-d4s.d4science.org to root@dataminer[0:1]-proto.d4science.org. Is it correct?
Andrea Dell'Amico
05:23 PM Support #8498 (Closed): Adding SSH keys to RPrototypingLab VRE: In order to test the service, could you please add my SSH key to both the RProto dataminers and also the key for the ... Nunzio Andrea Galante
06:30 PM VM Creation #8473: Please create a machine as copy of #7877: workspace-repository-prod.d4science.org and workspace-repository-prod1.d4science.org
updated to oracle java version 8 Tommaso Piccioli
04:54 PM VM Creation #8473 (Closed): Please create a machine as copy of #7877: Thanks Costantino Perciante
11:49 AM VM Creation #8473: Please create a machine as copy of #7877: /home/gcube/tomcat/jackrabbit_migrated is now a link to /data/newjackrabbit/jackrabbit_migrated, 70 GB free Tommaso Piccioli
11:29 AM VM Creation #8473 (In Progress): Please create a machine as copy of #7877: @tommaso.piccioli@isti.cnr.it unfortunately the /dev/xvda2 of only 10G on workspace-repository-prod1.d4science.org ... Massimiliano Assante
05:58 PM Task #8440 (Closed): RConnector to test : rstudio-dev.d4science.org: Roberto Cirillo
05:41 PM Task #8440 (In Progress): RConnector to test : rstudio-dev.d4science.org: Roberto Cirillo
05:39 PM Task #8428 (Closed): Accounting service to test: accounting-service-d.d4science.org: Roberto Cirillo
05:20 PM Task #8428 (In Progress): Accounting service to test: accounting-service-d.d4science.org: Roberto Cirillo
05:08 PM Task #8427 (Closed): Quota service to test : quota-d-d4s.d4science.org: Roberto Cirillo
04:48 PM Task #8427 (In Progress): Quota service to test : quota-d-d4s.d4science.org: Roberto Cirillo
04:46 PM Task #8493 (Closed): Increment the number of max connections to the infra postgresql server: Raised to 256.
Andrea Dell'Amico
04:41 PM Task #8493 (In Progress): Increment the number of max connections to the infra postgresql server: Andrea Dell'Amico
04:41 PM Task #8493 (Closed): Increment the number of max connections to the infra postgresql server: We almost reached the limit, today:
~~~
***** Nagios *****
Notification Type: PROBLEM
Service: Postgresql bac... Andrea Dell'Amico
03:27 PM Task #8455 (Rejected): Smart Executor to update : node22.d4science.org: This upgrade has been defined here: #8433 Roberto Cirillo

May 10, 2017

07:12 PM VM Creation #8473: Please create a machine as copy of #7877: I had to temporarily disable the http -> https redirection because we do not have a valid certificate yet. I'll add i... Andrea Dell'Amico
05:39 PM VM Creation #8473 (Feedback): Please create a machine as copy of #7877: Tommaso Piccioli
05:38 PM VM Creation #8473 (In Progress): Please create a machine as copy of #7877: workspace-repository-prod1.d4science.org running
There is a copy of /data/newJackrabbit/jackrabbit from workspace-re... Tommaso Piccioli
02:21 PM VM Creation #8473 (Closed): Please create a machine as copy of #7877: To speed up the jackrabbit migration tests, we need a copy of the machine reported https://support.d4science.org/issu... Costantino Perciante
06:26 PM Task #8345 (Closed): Dismiss the statistical manager servers: I'm closing this one. Let's open a different ticket when we will be able to kill activemq.
Andrea Dell'Amico
05:48 PM Incident #8474 (Feedback): Move the databases hosted on statistical-manager.d.d4science.org to postgresql-srv-dev.d4science.org: Andrea Dell'Amico
05:47 PM Incident #8474 (In Progress): Move the databases hosted on statistical-manager.d.d4science.org to postgresql-srv-dev.d4science.org: I just created the testdb and dataSpace databases on postgresql-srv-dev.d4science.org.
username and password did n... Andrea Dell'Amico
02:46 PM Incident #8474 (Closed): Move the databases hosted on statistical-manager.d.d4science.org to postgresql-srv-dev.d4science.org: testdb and dataSpace are still in use
devDataSpace, sm_dataspace_devnext, sm_operation_devnext probably not. We st... Andrea Dell'Amico
05:42 PM VM Creation #8472: New VM dataminer needed: Please @andrea.dellamico@isti.cnr.it could you set the minimal HW resources needed for this kind of dataminer? Roberto Cirillo
04:40 PM VM Creation #8472: New VM dataminer needed: Please, change the tracker type to `VM creation` and fill the required fields. Andrea Dell'Amico
12:23 PM VM Creation #8472 (Closed): New VM dataminer needed: A new Staging dataminer VM is needed, in order to be used for the Test phase of the DMPM Service.
The DMPM applicat... Nunzio Andrea Galante
05:21 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: @costantino.perciante@isti.cnr.it could you fix the version and check the range, please? Roberto Cirillo
05:20 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: Gabriele Giammatteo wrote:
> I see that you are using:
>
> ~~~
> [INFO] +- org.gcube.common.portal:portal-manage... Roberto Cirillo
05:06 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: I see that you are using:
~~~
[INFO] +- org.gcube.common.portal:portal-manager:jar:1.2.0-4.0.0-125735:compile
~~... Gabriele Giammatteo
04:18 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: The dependency tree used in my local build is the following:
~~~
INFO] org.gcube.socialnetworking:social-data-ind... Roberto Cirillo
03:47 PM Task #8461: Check social-data-indexer-se-plugin installation on node22.d4science.org: I've tried to build the artifact from my eclipse and using only the gcore-staging repository and it also works with t... Roberto Cirillo
10:52 AM Task #8461 (Feedback): Check social-data-indexer-se-plugin installation on node22.d4science.org: The problem is due to a bad social-networking-library artifact released in 4.5.0 (version 1.15.0-4.5.0-142236). This ... Roberto Cirillo
03:36 PM Support #8354 (Closed): Sardara Database - extend maximum characters in labels: So I was remembering well, unfortunately Paul. Sorry, we cannot support your request. Massimiliano Assante
03:35 PM Support #8354: Sardara Database - extend maximum characters in labels: Massimiliano Assante wrote:
> Well, i don't think that one should know the sardara DB schema to do the job. If I un... Andrea Dell'Amico
03:22 PM Support #8354 (In Progress): Sardara Database - extend maximum characters in labels: Well, i don't think that one should know the sardara DB schema to do the job. If I understand correctly Paul is aski... Massimiliano Assante
02:40 PM Support #8354: Sardara Database - extend maximum characters in labels: Sorry Paul but I know nothing about the sardara DB.
I'm reassigning the ticket to Massimiliano hoping he knows who ... Lucio Lelii
10:22 AM Support #8354: Sardara Database - extend maximum characters in labels: Hi Lucio,
Did you have the time to check this ticket?
Cheers, Paul Taconet
01:48 PM Task #8363: We need a new dataminer distribution to build the EGI image: That would be awesome. If the automati jar reloading works, work on https://support.d4science.org/issues/8034 will no... Andrea Dell'Amico
10:36 AM Task #8363: We need a new dataminer distribution to build the EGI image: adding the file $APP.xml with the following content:
~~~
<Context docBase="/home/gcube/tomcat/webapps/$APP"
... Lucio Lelii
10:11 AM Task #8359 (Closed): Add space into couchbase cluster: Alessandro Pieve
10:06 AM Task #6312 (In Progress): Java 8 unexpected behaviours should be communicated by the gCube VRE Social Facility: Maria Di Girolamo

May 09, 2017

10:15 PM Task #8359 (In Progress): Add space into couchbase cluster: resolved Alessandro Pieve
07:04 PM Task #8363: We need a new dataminer distribution to build the EGI image: The war distribution does not contain the algorithms, that must be downloaded separately.
Problem is, dataminer sear... Andrea Dell'Amico
05:46 PM VM Creation #8266 (Closed): VM Creation for Tuna Atlas dedicated GeoNetwork: Instance seems working. Fabio Sinibaldi
04:56 PM VM Creation #8266 (Feedback): VM Creation for Tuna Atlas dedicated GeoNetwork: The installation should be complete, can you verify?
The geonetwork servce is availale at http://geonetwork1-tunaatl... Andrea Dell'Amico
05:33 PM Task #8466 (Closed): Give the possibility to install smartgears from the staging repository and the related apps from the snapshots one: I did it this way:
~~~
gcube_repository: 'gcube-staging'
smartgears_gcube_repository: '{{ gcube_repository }}'
... Andrea Dell'Amico
05:20 PM Task #8466 (Closed): Give the possibility to install smartgears from the staging repository and the related apps from the snapshots one: Right now we use a single variable through all the ansible playbooks, `gcube_repository`.
This is not sufficient a... Andrea Dell'Amico
05:03 PM Task #8461 (In Progress): Check social-data-indexer-se-plugin installation on node22.d4science.org: I've done some more tests:
- the staging artefact of the plugin still throws the following exception when the plug... Costantino Perciante
03:48 PM Task #8461 (Closed): Check social-data-indexer-se-plugin installation on node22.d4science.org: In order to upgrade the plugin above in production environment it's need to check if it works on node22 with the foll... Roberto Cirillo
12:08 PM Task #8433: social-data-indexer-se-plugin service to test : node22.d4science.org: we are performing some test on this node. I'm going to reassign this ticket to me for the moment. Roberto Cirillo
11:06 AM Task #8433 (Closed): social-data-indexer-se-plugin service to test : node22.d4science.org: Maria Di Girolamo
12:00 PM Task #8455 (Rejected): Smart Executor to update : node22.d4science.org: Maria Di Girolamo
11:58 AM Task #8454 (Closed): Smart Executor to test : node19.d4science.org: Maria Di Girolamo
11:56 AM Task #8453 (Closed): Smart Executor to test : node17.d4science.org: Maria Di Girolamo
11:55 AM Task #8452 (Closed): Smart Executor to test : node6.d4science.org: Maria Di Girolamo
11:53 AM Task #8451 (Closed): Smart Executor to test : smartexecutor1-d-d4s.d4science.org: Maria Di Girolamo
11:50 AM Task #8449 (Closed): Resource Registry (New IS) to test : resourceregistry1-d.d4science.org: Maria Di Girolamo
11:47 AM Task #8446 (Closed): DataManager Pool Manager Service to test : node2-d-d4s.d4science.org: Maria Di Girolamo
11:45 AM Task #8445 (Closed): FHNManager Service to test : node2-d-d4s.d4science.org: Maria Di Girolamo
11:43 AM Task #8444 (Closed): sdi-service to test : sdi-d-d4s.d4science.org: Maria Di Girolamo
11:39 AM Task #8443 (Closed): Home Library Webapp to test : node11.d.d4science.research-infrastructures.eu: Maria Di Girolamo
11:32 AM Task #8442 (Closed): Authorization Service to update : auth@node7.d.d4science.research-infrastructures.eu: Maria Di Girolamo
11:29 AM Task #8440 (Closed): RConnector to test : rstudio-dev.d4science.org: Maria Di Girolamo
11:26 AM Task #8439 (Closed): ckan-connector to test : ckan-d-d4s.d4science.org: Maria Di Girolamo
11:21 AM Task #8438 (Closed): species-product-discovery to test : spd-devsec.d4science.org: Maria Di Girolamo
11:13 AM Task #8435 (Closed): tabular-data-manager service to update : gcube@node7.d.d4science.research-infrastructures.eu: Maria Di Girolamo
11:11 AM Task #8434 (Closed): tabular-data-manager service to test : tabulardata-devsec.org: Maria Di Girolamo
11:02 AM Task #8431 (Closed): resource-checker-se-plugin service to test : resource-checker-d-d4s.d4science.org: The service is updated. Please, could you test it? Maria Di Girolamo
10:58 AM Task #8430 (Closed): gcube-oauth service to test : socialnetworking-d-d4s.d4science.org: The service is updated. Please, could you test it? Maria Di Girolamo
10:56 AM Task #8429 (Closed): social-networking-ws service to test : socialnetworking-d-d4s.d4science.org: The service is updated. Please, could you test it? Maria Di Girolamo
10:50 AM Task #8428 (Closed): Accounting service to test: accounting-service-d.d4science.org: Maria Di Girolamo
10:42 AM Task #8427 (Closed): Quota service to test : quota-d-d4s.d4science.org: Maria Di Girolamo
10:40 AM Task #8426 (Closed): Dataminer service to test : dataminer2-d-d4s.d4science.org: Maria Di Girolamo
10:26 AM Task #6309: D4Science Infrastructure migration to Java 8: due to changes in a related task Maria Di Girolamo
10:26 AM Task #6306: Migrate development infrastructure nodes to Java 8: due to changes in a related task Maria Di Girolamo
10:26 AM Task #8424 (Closed): Dataminer service to test : dataminer1-d-d4s.d4science.org.: Host: dataminer1-d-d4s.d4science.org. Maria Di Girolamo

May 08, 2017

06:12 PM Incident #8411 (In Progress): mongodb production, problem with backup: We are going to test it with a longer timeout config, next backup will start 19:53 today. Tommaso Piccioli
02:53 PM Incident #8411: mongodb production, problem with backup: I've checked the mongo5-p-d4s instance and it is correctly synchronized with the primary node. Roberto Cirillo
12:04 PM Incident #8411 (Closed): mongodb production, problem with backup: Il backup di mongo si è interrotto in modo anomalo durante questo fine settimana, sto indagando sulle possibili cause... Tommaso Piccioli
05:55 PM Task #8363: We need a new dataminer distribution to build the EGI image: We will test the new war file first
Andrea Dell'Amico
05:52 PM VM Creation #8316 (Feedback): new VM for sharelatex in dev: The VM is ready. It answers on https://sharelatex-d-d4s.d4science.org/
There's no valid certificate yet.
Andrea Dell'Amico
01:14 PM VM Creation #8316 (In Progress): new VM for sharelatex in dev: sharelatex-d-d4s.d4science.org, IP 146.48.123.121 Andrea Dell'Amico
02:50 PM Task #8345: Dismiss the statistical manager servers: Tommaso Piccioli wrote:
> At the moment these machines are connected to the message-broker.d4science.research-infras... Roberto Cirillo
12:04 PM Task #8345: Dismiss the statistical manager servers: I missed `statistical-manager1.d.d4science.org`. Shutting it down now.
Andrea Dell'Amico
11:07 AM Task #8345: Dismiss the statistical manager servers: At the moment these machines are connected to the message-broker.d4science.research-infrastructures.eu (prod), servic... Tommaso Piccioli
01:23 PM VM Creation #8266 (In Progress): VM Creation for Tuna Atlas dedicated GeoNetwork: geonetwork1-tunaatlas.d4science.org 146.48.123.122 Andrea Dell'Amico
12:08 PM VM Creation #8266: VM Creation for Tuna Atlas dedicated GeoNetwork: A new postgis database is needed. Fabio Sinibaldi
11:57 AM Task #8359 (Closed): Add space into couchbase cluster: Done on Fri May 5 15:25 Tommaso Piccioli

May 06, 2017

01:56 PM Task #7708 (Closed): Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: Done.
Andrea Dell'Amico

May 05, 2017

07:09 PM Task #7708: Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: yes you can kill the instances Alessandro Pieve
06:48 PM Task #7708 (Feedback): Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: The quota_db_dev has been migrated.
Can we kill the postgresql instances on dev2 and preprod1?
Andrea Dell'Amico
04:28 PM Task #7708: Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: ok for me is possible now Alessandro Pieve
04:10 PM Task #7708: Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: @alessandro.pieve@isti.cnr.it let us know when we can move the quota_dev_db
Andrea Dell'Amico
05:27 PM Incident #8358: Geoanalytics portlet: Problematic deployment: Yes, strange behaviour. Probably, some deployment issue.
Anyway, thank you all for the help. Vassilis Floros
05:13 PM Incident #8358 (Closed): Geoanalytics portlet: Problematic deployment: The portlet has been redeployed (and the server restarted). It seems ok now on all the instances. Here's the log from... Massimiliano Assante
03:10 PM Incident #8358: Geoanalytics portlet: Problematic deployment: The logs didn't help me as much as I thought. So, I checked Geoanalytics portlet in the pre-production Portal and saw... Vassilis Floros
12:51 PM Incident #8358: Geoanalytics portlet: Problematic deployment: I connected, thank you. Vassilis Floros
12:23 PM Incident #8358: Geoanalytics portlet: Problematic deployment: Permission denied again. Vassilis Floros
04:25 PM Task #8394 (Closed): gcore ansible roles for testing: During the last six months I worked on several ansible roles to automate the deployment of our gcube-based testing in... Daniele Pavia
04:22 PM VM Creation #8266: VM Creation for Tuna Atlas dedicated GeoNetwork: Does it need to connect to an existing database or do we need a new one?
Andrea Dell'Amico
03:32 PM Task #8359: Add space into couchbase cluster: Increase 40GB the nodes couchbase02-d4s and couchbase03-d4s Alessandro Pieve
03:32 PM VM Creation #8283 (Closed): Provide a new development machine for the catalogue-ws: Perfect! Thanks Costantino Perciante
03:30 PM VM Creation #8283: Provide a new development machine for the catalogue-ws: Done. Can you check?
Andrea Dell'Amico
02:30 PM VM Creation #8283: Provide a new development machine for the catalogue-ws: Thanks Andrea, we are almost there: I forgot to say that this machine (in dev as well as in production later on) has ... Costantino Perciante
01:06 PM VM Creation #8283 (Feedback): Provide a new development machine for the catalogue-ws: The service is up: http://catalogue-ws-d-d4s.d4science.org/catalogue-ws/index.jsp
Andrea Dell'Amico
12:07 PM VM Creation #8283: Provide a new development machine for the catalogue-ws: catalogue-ws-d-d4s.d4science.org 146.48.123.120
Andrea Dell'Amico
12:01 PM VM Creation #8283 (In Progress): Provide a new development machine for the catalogue-ws: Andrea Dell'Amico
01:32 PM Task #6309: D4Science Infrastructure migration to Java 8: due to changes in a related task Maria Di Girolamo
01:32 PM Task #8380 (Closed): Testing activities on the development infrastructure with Java 8: Maria Di Girolamo
01:27 PM Task #8345 (In Progress): Dismiss the statistical manager servers: Done. Andrea Dell'Amico
01:25 PM Task #8345: Dismiss the statistical manager servers: I'm shutting down these ones:
> statistical-manager1.d4science.org
> statistical-manager.d.d4science.org
> stati... Andrea Dell'Amico
11:47 AM Task #8363: We need a new dataminer distribution to build the EGI image: Thanks, I'm going to build a new image.
Andrea Dell'Amico
11:22 AM Task #8363 (In Progress): We need a new dataminer distribution to build the EGI image: I updated the zip file containing the required packages and configuration files for DataMiner. The version now availa... Paolo Scarponi
11:08 AM Task #8367: Automatize DataMiner Testing: Here is the list:
~~~
GET_CAPABILITIES
http://dataminer1-d-d4s.d4science.org/wps/WebProcessingService?Request=Ge... Gianpaolo Coro
11:05 AM Task #8367 (Closed): Automatize DataMiner Testing: In this ticket I report a list of URLs that can be used to automatically test DataMiner. Once these tests work, a Dat... Gianpaolo Coro

May 04, 2017

07:42 PM Task #8363 (Closed): We need a new dataminer distribution to build the EGI image: Not only the database-rm-algorithms fix is needed, but also all the algorithms should be updated. See comments here: ... Andrea Dell'Amico
07:38 PM Incident #8360 (Closed): update database-rm-algorithms on dataminer instances: The GP's comment is a matter of a different ticket. My fault that I commented here.
Andrea Dell'Amico
07:22 PM Incident #8360 (In Progress): update database-rm-algorithms on dataminer instances: I am reopening the ticket since I understood from @gianpaolo.coro@isti.cnr.it comment that the issue is not solved. Pasquale Pagano
06:32 PM Incident #8360: update database-rm-algorithms on dataminer instances: The current zip does not satisfy Andrea's request. The zip contains old algorithms and is useless without an alignmen... Gianpaolo Coro
06:25 PM Incident #8360 (Closed): update database-rm-algorithms on dataminer instances: All the instances have been updated Roberto Cirillo
06:19 PM Incident #8360: update database-rm-algorithms on dataminer instances: Andrea Dell'Amico wrote:
> @lucio.lelii@isti.cnr.it can we have a new wps.zip? I need it to build the EGI images.
... Roberto Cirillo
05:56 PM Incident #8360: update database-rm-algorithms on dataminer instances: @lucio.lelii@isti.cnr.it can we have a new wps.zip? I need it to build the EGI images.
Andrea Dell'Amico
05:37 PM Incident #8360 (In Progress): update database-rm-algorithms on dataminer instances: Roberto Cirillo
05:34 PM Incident #8360 (Closed): update database-rm-algorithms on dataminer instances: It's needed to update the library above on all dataminer instances on production environment otherwise the db manager... Roberto Cirillo
06:18 PM Incident #8358: Geoanalytics portlet: Problematic deployment: Andrea can you please check? Massimiliano Assante
05:43 PM Incident #8358: Geoanalytics portlet: Problematic deployment: kostas, I think @andrea.dellamico@isti.cnr.it can answer you Massimiliano Assante
05:00 PM Incident #8358 (In Progress): Geoanalytics portlet: Problematic deployment: Massimiliano Assante
04:51 PM Incident #8358 (Closed): Geoanalytics portlet: Problematic deployment: Today we are experiencing problems when we try to test the geoanalytics portlet in production.
From our tests we hav... Panagiota Koltsida
05:14 PM Task #8359 (Closed): Add space into couchbase cluster: Add space into Couchbase cluster
Alessandro Pieve
04:58 PM Task #8314 (Closed): dataminer0-proto: check scope on ansible playbook: Done.
From now on, all the production dataminer will be configured this way:
~~~
smartgears_authorized_on_all_sc... Andrea Dell'Amico
03:18 PM Task #8314: dataminer0-proto: check scope on ansible playbook: Andrea Dell'Amico wrote:
> Roberto Cirillo wrote:
> > I think it's better to align the dataminer1-proto to datamine... Roberto Cirillo
02:09 PM Task #8314: dataminer0-proto: check scope on ansible playbook: Roberto Cirillo wrote:
> I think it's better to align the dataminer1-proto to dataminer0-proto in order to decrease ... Andrea Dell'Amico
10:06 AM Task #8314: dataminer0-proto: check scope on ansible playbook: I think it's better to align the dataminer1-proto to dataminer0-proto in order to decrease the load on registry servi... Roberto Cirillo
04:28 PM Support #8354: Sardara Database - extend maximum characters in labels: reassigning the ticket to Lucio who has more expertise in this type of tasks Massimiliano Assante
04:06 PM Support #8354 (Closed): Sardara Database - extend maximum characters in labels: I would like to extend the maximum number of characters for labels (table names) in the PostgreSQL Sardara database (... Paul Taconet
02:14 PM Task #8345: Dismiss the statistical manager servers: message-broker.d.d4science.research-infrastructures.eu
(alias ui.grid.research-infrastructures.eu) Tommaso Piccioli
02:07 PM Task #8345 (Closed): Dismiss the statistical manager servers: A potential list:
statistical-manager1.d4science.org
statistical-manager.d.d4science.org
statistical-manager-pre... Andrea Dell'Amico
12:20 PM Incident #8340 (Closed): Problem in publishing a file from a shared folder to the catalogue: That file was corrupted somehow. Gianpaolo just had to delete it from the folder and re-upload it again.
Then he has... Costantino Perciante
10:51 AM Incident #8340 (Closed): Problem in publishing a file from a shared folder to the catalogue: @gianpaolo.coro@isti.cnr.it is experiencing a problem in publishing a file from the workspace in the catalogue. The s... Costantino Perciante

Apr 27, 2017

08:15 PM VM Creation #8282: SDI service: If I correctly remember, we decided that '-p' was not needed for d4science production servers? Am I wrong? Pasquale Pagano
07:06 PM VM Creation #8282 (In Progress): SDI service: sdi-p-d4s.d4science.org running Tommaso Piccioli
06:03 PM VM Creation #8282: SDI service: I suggest to use the following name:
~~~
sdi-p-d4s.d4science.org
~~~ Roberto Cirillo
05:47 PM VM Creation #8282 (Closed): SDI service: In order to deploy the new service in prod it's needed to have a new VM. Roberto Cirillo
06:37 PM Task #5422 (Closed): develop a proxy service to be used for access http external pages from the portal domain: The proxy is up and running and works for not dinamic content Ciro Formisano
06:15 PM Upgrade #8256 (Planned): OpenAIRE VO upgrade to gCube 4.4: Roberto Cirillo
06:15 PM VM Creation #8283 (Closed): Provide a new development machine for the catalogue-ws: The service is available in svn at /trunk/data-catalogue/catalogue-ws or here if you prefer http://maven.research-inf... Costantino Perciante
06:14 PM Upgrade #8254 (Planned): D4Research VO upgrade to gCube 4.4: Roberto Cirillo
06:14 PM Upgrade #8252 (Planned): Edison VO upgrade to gCube 4.4: Roberto Cirillo
06:13 PM Upgrade #8251 (Planned): gCubeApps VO upgrade to gCube 4.4: Roberto Cirillo
06:13 PM Upgrade #8250 (Planned): FARM VO upgrade to gCube 4.4: Roberto Cirillo
06:00 PM Upgrade #8248 (Planned): D4Science Root VO upgrade to gCube 4.4: Roberto Cirillo
05:48 PM Task #5757 (In Progress): Configure GeoNetwork OAI-PMH: Thanks for taking actions. I would suggest some changes. The following fields must be reconsidered:
* repositoryNa... Leonardo Candela
05:09 PM Task #5757 (Feedback): Configure GeoNetwork OAI-PMH: Please check exposed information and report feedback if any. Fabio Sinibaldi
05:08 PM Task #5757 (In Progress): Configure GeoNetwork OAI-PMH: I just noticed this ticket has never been updated. Configuration should be fixed by now. Fabio Sinibaldi
05:21 PM Upgrade #8255 (Planned): SoBigData VO upgrade to gCube 4.4: **Hosting Nodes**
*WHN to upgrade*

* **(CNR) DONE** dataminer3.d4science.org
* **(CNR) DONE** dataminer4.... Roberto Cirillo
05:19 PM VM Creation #6849 (Closed): Create an OrientDB cluster for production: Luca Frosini
05:11 PM Task #2174: Dataminer and Statistical Manager packages: install.packages("testit") Gianpaolo Coro
05:06 PM Task #8280 (Closed): Update geonetwork installation: Current GeoNetwork installation is obsolete (host geoserver-dev2.d4science-ii.research-infrastructures.eu). Please up... Fabio Sinibaldi
12:26 PM VM Creation #8245 (Closed): new VM for new service: dataminer-pool-manager.1-0-0: The new service has been installed Roberto Cirillo
11:15 AM VM Creation #8245 (In Progress): new VM for new service: dataminer-pool-manager.1-0-0: The empty VM is running, the name is:
dm-pool-manager-pre.d4science.org
Tommaso Piccioli
09:49 AM Support #8273 (Closed): Re-install RFigisGeo package: Thanks Andrea, i was not aware of this nightly job. It's perfect to have this in place Emmanuel Blondel

Apr 26, 2017

08:27 PM Support #8273 (Feedback): Re-install RFigisGeo package: All the R packages are upgraded every night at 3am, so tomorrow you should find the new version installed. Andrea Dell'Amico
07:45 PM Support #8273 (Closed): Re-install RFigisGeo package: Can you re-install RFigisGeo from Github? to do in all R instances running RStudio / Dataminer.
Package is availab... Emmanuel Blondel
06:08 PM VM Creation #8245: new VM for new service: dataminer-pool-manager.1-0-0: Roberto, please consider the Etics revision number dataminer-pool-manager 1.0.0-4.4.0-147199
As discussed offline, s... Nunzio Andrea Galante
04:49 PM Task #5533 (Closed): Prometheus and Grafana investigation: Alessandro Pieve
04:48 PM Task #5533 (Rejected): Prometheus and Grafana investigation: Alessandro Pieve
03:24 PM Upgrade #8006 (Completed): /gcube/preprod upgrade to gCube 4.4.0 (Common Apps): Roberto Cirillo
02:58 PM VM Creation #8266 (Closed): VM Creation for Tuna Atlas dedicated GeoNetwork: Please create VM as described. Fabio Sinibaldi
11:03 AM Task #8264 (Closed): please create email address for SoBigData Officer: Tommaso Piccioli
10:49 AM Task #8264 (Closed): please create email address for SoBigData Officer: sobigdata-officer at d4science.org Massimiliano Assante
10:40 AM VM Creation #8189 (Closed): New VM for sdi RESTFul service: Roberto Cirillo

Apr 25, 2017

03:15 PM Incident #8258 (Closed): Error accessing R studio on FAO Tuna Atlas VRE: R Studio is now working back. I close the ticket. Thank you Paul Taconet

Apr 24, 2017

09:14 PM Incident #8258: Error accessing R studio on FAO Tuna Atlas VRE: Thanks for the quick answer.
However I have just logged out, logged in, retried and still got the same error... Paul Taconet
07:00 PM Incident #8258: Error accessing R studio on FAO Tuna Atlas VRE: I have any problem to access RStudio in that environment. Have you retried? just to exclude any temporary error.
Cl... Pasquale Pagano
06:23 PM Incident #8258 (Closed): Error accessing R studio on FAO Tuna Atlas VRE: I cannot access R studio on the FAO Tuna Atlas VRE. I get the following error when I clic on the RStudio button of th... Paul Taconet
05:17 PM Upgrade #8254: D4Research VO upgrade to gCube 4.4: **Hosting Nodes**
*WHN to upgrade*

* **(CNR) DONE** dataminer3.d4science.org
* **(CNR) DONE** dataminer4.... Roberto Cirillo
04:36 PM Upgrade #8254 (Completed): D4Research VO upgrade to gCube 4.4: Roberto Cirillo
05:12 PM Upgrade #8252: Edison VO upgrade to gCube 4.4: Nothing to upgrade Roberto Cirillo
04:35 PM Upgrade #8252 (Completed): Edison VO upgrade to gCube 4.4: Roberto Cirillo
05:09 PM Upgrade #8005: D4Science Infrastructure Upgrade to gCube 4.4: due to changes in a related task Roberto Cirillo
05:09 PM Upgrade #8251: gCubeApps VO upgrade to gCube 4.4: **Hosting Nodes**
*GHN to dismiss*
* **(CNR) DONE** statistical-manager1.d4science.org
*WHN to upgrade*

... Roberto Cirillo
04:34 PM Upgrade #8251 (Completed): gCubeApps VO upgrade to gCube 4.4: Roberto Cirillo
05:02 PM Upgrade #8250: FARM VO upgrade to gCube 4.4: **Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** dataminer6-p-d4s.d4science.org
* **(CNR) DONE** datami... Roberto Cirillo
04:34 PM Upgrade #8250 (Completed): FARM VO upgrade to gCube 4.4: Roberto Cirillo
04:51 PM Upgrade #8248: D4Science Root VO upgrade to gCube 4.4: **HostingNode**
* **(CNR) DONE** data.d4science.org
*WHN to upgrade*
* **(CNR) DONE** sdi-service.d4sci... Roberto Cirillo
04:33 PM Upgrade #8248 (Completed): D4Science Root VO upgrade to gCube 4.4: Roberto Cirillo
04:48 PM VM Creation #8245: new VM for new service: dataminer-pool-manager.1-0-0: Maven coordinates:
~~~
<groupId>org.gcube.dataAnalysis</groupId>
<artifactId>dataminer-pool-manager</artifactId>... Roberto Cirillo
12:22 PM VM Creation #8245: new VM for new service: dataminer-pool-manager.1-0-0: Please @nunzioandrea.galante@eng.it check if the new VM request is correct Roberto Cirillo
12:21 PM VM Creation #8245 (Closed): new VM for new service: dataminer-pool-manager.1-0-0: In order to deploy on preproduction environment the new service "dataminer-pool-manager" it's need to create a new VM... Roberto Cirillo
04:41 PM Upgrade #8007 (Invalid): /gcube/preprod upgrade to gCube 4.4.0 (Community Apps): The community app plan has been integrated in the following ticket: #8006 Roberto Cirillo
04:39 PM Task #8257 (Closed): Please produce release notes for gCube 4.4.0: Roberto Cirillo
04:38 PM Upgrade #8256 (Completed): OpenAIRE VO upgrade to gCube 4.4: Roberto Cirillo
04:37 PM Upgrade #8255 (Completed): SoBigData VO upgrade to gCube 4.4: Roberto Cirillo
04:36 PM Upgrade #8253 (Completed): SmartArea VO upgrade to gCube 4.4: Roberto Cirillo
04:33 PM Upgrade #8249 (Completed): D4Science Gateways upgrade to gCube 4.4: The Statistical Manager portlet should be removed from all VREs Roberto Cirillo
12:40 PM Upgrade #8006 (In Progress): /gcube/preprod upgrade to gCube 4.4.0 (Common Apps): Roberto Cirillo
10:45 AM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: The updated script is running on that node. It also takes care of re-adding any missing resource to a context. Costantino Perciante
09:43 AM VRE #7892 (Released): Creation of new VRE - EcoEvo: Leonardo Candela
09:42 AM VRE #7892 (Available): Creation of new VRE - EcoEvo: Leonardo Candela

Apr 21, 2017

06:37 PM Incident #8184 (Closed): smaph app: connection timeout from remote server: Roberto Cirillo
05:25 PM Incident #8184: smaph app: connection timeout from remote server: Should be working now. Marco Cornolti
05:44 PM Incident #8243 (Closed): The dev rstudio server has been configured to connect to the production ldap server: Fixed.
Andrea Dell'Amico
05:31 PM Incident #8243 (In Progress): The dev rstudio server has been configured to connect to the production ldap server: Andrea Dell'Amico
05:30 PM Incident #8243 (Closed): The dev rstudio server has been configured to connect to the production ldap server: An ansible configuration is missing for rstudio dev. It must connect to ldap-d.d4science.org and not ldap.d4science.o... Andrea Dell'Amico
05:18 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Andrea Dell'Amico wrote:
> Costantino Perciante wrote:
> > What if we use the smart-executor plugin for this task t... Costantino Perciante
05:07 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Costantino Perciante wrote:
> What if we use the smart-executor plugin for this task too?
> I mean, no other extern... Andrea Dell'Amico
04:45 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: What if we use the smart-executor plugin for this task too?
I mean, no other external file/scripts/whatever, just th... Costantino Perciante
04:35 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: yes, the list of VOs is fixed for the production, I can change the script with 2 options:
- the script takes as ar... Lucio Lelii
04:27 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: @lucio.lelii@isti.cnr.it the java source has a fixed list of VO from production. I cannot use it to test in dev. Can ... Andrea Dell'Amico
11:43 AM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: The smart executor plugin will run every hour, starting from now, on the node resource-checker-d-d4s.d4science.org. I... Costantino Perciante
05:09 PM VM Creation #8189: New VM for sdi RESTFul service: Done.
Andrea Dell'Amico
04:51 PM VM Creation #8189: New VM for sdi RESTFul service: I've checked the service: the service is running correctly but we need also to add the "/gcube" scope.
Now the servi... Roberto Cirillo
11:43 AM VM Creation #8189: New VM for sdi RESTFul service: Done. I also removed the http -> https redirection. We verified that some java clients fail when the redirection is a... Andrea Dell'Amico
11:01 AM VM Creation #8189: New VM for sdi RESTFul service: Andrea Dell'Amico wrote:
> It's running with
>
> ~~~
> <authorizeChildrenContext>true</authorizeChildrenContext... Roberto Cirillo
10:43 AM VM Creation #8189: New VM for sdi RESTFul service: It's running with
~~~
<authorizeChildrenContext>true</authorizeChildrenContext>
~~~
If that's not what you w... Andrea Dell'Amico
10:36 AM VM Creation #8189: New VM for sdi RESTFul service: The service is running only under root-vo scope: "/gcube" but the request is to run in all gcube scopes.
Please, co... Roberto Cirillo
04:06 PM VRE #7892: Creation of new VRE - EcoEvo: I am among the managers, but I do not see the Admin menu Miriam Baglioni
02:56 PM VRE #7892: Creation of new VRE - EcoEvo: Done. Let me know if it works Costantino Perciante
02:53 PM VRE #7892: Creation of new VRE - EcoEvo: @francesco.mangiacrapa@isti.cnr.it Can I have Manager privileges to the EcoEvo VRE? I ask this because when we need t... Miriam Baglioni
04:00 PM Task #7900: Generating Darwin Core Archives via SPD: Issues with the service remain, but at least we were able to generate the DWCAs to meet FAO requirements. The main wo... Gianpaolo Coro
03:36 PM Incident #8237 (Closed): workspare-repository.d4science.org has a wrong DNS resolvers configuration.: The couchbase client asks for address reverse resolution, and the slow answers often cause exceptions.
@tommaso.pi... Andrea Dell'Amico
03:35 PM Incident #8237 (Closed): workspare-repository.d4science.org has a wrong DNS resolvers configuration.: The running one is:
~~~
search research-infrastructures.eu isti.cnr.it
nameserver 146.48.85.210
nameserver 146.... Andrea Dell'Amico
02:49 PM Task #7899 (Closed): Create a catalogue profile for EcoEvo VRE: thank you very much Miriam Baglioni
10:43 AM Task #7899: Create a catalogue profile for EcoEvo VRE: @francesco.mangiacrapa@isti.cnr.it
> -1 Is "Search interface webpage" field needed for each "Types" (DataReposito... Leonardo Candela
10:37 AM Task #7899: Create a catalogue profile for EcoEvo VRE: @miriam.baglioni@isti.cnr.it
-1 Is "Search interface webpage" field needed for each "Types" (DataRepository, Aggr... Francesco Mangiacrapa
09:16 AM Task #7899: Create a catalogue profile for EcoEvo VRE: @leonardo.candela@isti.cnr.it Could you please add another field in the schema? They would like to have a "Search in... Miriam Baglioni

Apr 20, 2017

06:59 PM VM Creation #8189 (Feedback): New VM for sdi RESTFul service: The SDI service has been installed Andrea Dell'Amico
03:32 PM VM Creation #8189: New VM for sdi RESTFul service: Andrea Dell'Amico wrote:
> @fabio.sinibaldi@isti.cnr.it can you provide the maven data to fetch the sdi-service app?... Roberto Cirillo
03:06 PM VM Creation #8189: New VM for sdi RESTFul service: The VM is up and running. The missing piece is the sdi-service app.
Andrea Dell'Amico
02:07 PM VM Creation #8189: New VM for sdi RESTFul service: @fabio.sinibaldi@isti.cnr.it can you provide the maven data to fetch the sdi-service app? Andrea Dell'Amico
01:49 PM VM Creation #8189 (In Progress): New VM for sdi RESTFul service: IP address: 146.48.123.116 Andrea Dell'Amico
06:50 PM VM Creation #8197 (Closed): Provide a new SmartGears node equipped with the SmartExecutor: Costantino Perciante
05:41 PM VM Creation #8197 (Feedback): Provide a new SmartGears node equipped with the SmartExecutor: The plugin has been installed with ansible, so the playbook is complete.
But there are scopes problems, I see from t... Andrea Dell'Amico
02:32 PM VM Creation #8197: Provide a new SmartGears node equipped with the SmartExecutor: Here you can find the plugin, from staging: build http://maven.research-infrastructures.eu/nexus/content/repositories... Costantino Perciante
01:54 PM VM Creation #8197: Provide a new SmartGears node equipped with the SmartExecutor: The VM has been configured. The only missing part are the smart executor plugin and the script that reinstates the mi... Andrea Dell'Amico
01:05 PM VM Creation #8197: Provide a new SmartGears node equipped with the SmartExecutor: resource-checker-d-d4s.d4science.org 146.48.123.110 Andrea Dell'Amico
12:57 PM VM Creation #8197: Provide a new SmartGears node equipped with the SmartExecutor: Andrea Dell'Amico wrote:
So it's a dev VM. I'm going to change the hostname. The one above will be used for the prod... Andrea Dell'Amico
12:25 PM VM Creation #8197: Provide a new SmartGears node equipped with the SmartExecutor: resource-checker-d4s.d4science.org 146.48.123.109 Andrea Dell'Amico
12:24 PM VM Creation #8197 (In Progress): Provide a new SmartGears node equipped with the SmartExecutor: Can you provide the maven information to access the resource-checker-se plugin?
Andrea Dell'Amico
10:01 AM VM Creation #8197 (Closed): Provide a new SmartGears node equipped with the SmartExecutor: The resource-checker-se-plugin will run on it (available on subversion at trunk/information-system/resource-checker-s... Costantino Perciante
05:13 PM 3rdPartyApplication Support #8214 (In Progress): Mobile app to use the oauth2 service: Massimiliano Assante
05:12 PM 3rdPartyApplication Support #8214: Mobile app to use the oauth2 service: Until you don't provide an authorised redirect URL we can't give you and ID. It won't work without it. Massimiliano Assante
05:00 PM 3rdPartyApplication Support #8214 (Rejected): Mobile app to use the oauth2 service: We need to use the oauth service for the mobile application of the social network.
How can we obtain the required... Panagiota Koltsida
04:16 PM Task #8040: Impossible to produce DWCA for a number of Families: I also see many accounting issues in some threads:
~~~
java.lang.NullPointerException: null
at org.gcube... Gianpaolo Coro
04:14 PM Task #8040: Impossible to produce DWCA for a number of Families: It seems something happens when the service meets a taxonomic name which is either "quarantined" or deleted. Further,... Gianpaolo Coro
01:08 PM Task #8040: Impossible to produce DWCA for a number of Families: Please @valentina.marioli@isti.cnr.it analyses this issue and if some changes to the code has to be implemented this ... Pasquale Pagano
03:42 PM Task #8210 (Rejected): HL REST API upload: overwrite the file if a file with the same name already exists: HL REST API should be improved in order to overwrite a file when the user uploads a file with the same name. Valentina Marioli
03:38 PM Task #8031 (Closed): Problem with interaction Workspace - RStudi: I think we can close this ticket and I'm going to open a new ticket to improve the REST API in order to overwrite a f... Valentina Marioli
01:05 PM Task #8031: Problem with interaction Workspace - RStudi: Can you report the status of this activity and what is missing to close this issue? Pasquale Pagano
03:26 PM VM Creation #7927 (Closed): More DataMiner machines required in the GenericWorker cluster: Nevermind. dataminer3-genericworkers.d4science.org has now 8 GB of RAM and 4 CPUs.
I'm going to shutdown dataminer... Andrea Dell'Amico
12:13 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: Gianpaolo Coro wrote:
> Please, add resources to dataminer3-genericworkers.d4science.org
Is it a problem if I inc... Andrea Dell'Amico
12:09 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: Please, add resources to dataminer3-genericworkers.d4science.org Gianpaolo Coro
11:58 AM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: I just removed dataminer[1:2]-genericworkers.d4science.org from the genericworkers backend. Now we have two free data... Andrea Dell'Amico
01:55 PM Task #7814 (Closed): Provide a script for restoring missed scope from mandatory resources: Andrea Dell'Amico
12:51 PM Support #8131 (Closed): downloadFileWS function issue: Pasquale Pagano
12:30 PM Support #8131: downloadFileWS function issue: Thank you Roberto, it seems to be ok now.
thanks! TAHA IMZILEN

Apr 19, 2017

11:38 PM Task #8040: Impossible to produce DWCA for a number of Families: We are struggling to produce the DWCA for some crucial species (ca. 14400) but there are some issues:
1 - there a... Gianpaolo Coro
11:26 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: Yes, I have run some tests and the Garr resources are sufficient. Gianpaolo Coro
07:38 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: @gianpaolo.coro@isti.cnr.it any opinion on my proposal?
Andrea Dell'Amico
07:54 PM Task #1790 (Paused): Provide 2 new MongoDB nodes v 3.0 for preproduction environment: This is a year old. We can pause it for the time being. Andrea Dell'Amico
07:53 PM Task #1790 (In Progress): Provide 2 new MongoDB nodes v 3.0 for preproduction environment: Andrea Dell'Amico
07:51 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Lucio Lelii wrote:
> I have just attached the script to add all scopes to the selected resource ids.
> Run it with ... Andrea Dell'Amico
06:48 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: We had another issue in production and another ticket from the user. It is fundamental to implement this workaround n... Pasquale Pagano
03:07 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: I have just attached the script to add all scopes to the selected resource ids.
Run it with the command:
~~~
java ... Lucio Lelii
12:48 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Costantino Perciante wrote:
> Andrea Dell'Amico wrote:
> > We need a place writeable by the gcube user. Anything un... Andrea Dell'Amico
10:34 AM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Andrea Dell'Amico wrote:
> We need a place writeable by the gcube user. Anything under /home/gcube is fine with me, ... Costantino Perciante
07:40 PM VM Creation #7855 (Closed): Provide node to install GeoFence application: Andrea Dell'Amico
07:40 PM VM Creation #7465 (Closed): Please Create a VM to install SmartExecutor for SmartArea: Andrea Dell'Amico
07:39 PM VM Creation #7466 (Closed): Please Create 2 VM to install SmartExecutor for SoBigData: Andrea Dell'Amico
07:37 PM Task #1285 (Closed): Explore Zulip as a free alternative to Slack for team collaboration: It's working well, but its features are still inferior to slack. I'm using it mostly to setup some integrations.
We ... Andrea Dell'Amico
06:39 PM Support #8131 (Feedback): downloadFileWS function issue: Dear Taha, we were experiencing some routing issues on our network. The problem seems to be fixed now. Could you retr... Roberto Cirillo
06:07 PM Support #8131 (In Progress): downloadFileWS function issue: Roberto Cirillo
06:35 PM Task #7899: Create a catalogue profile for EcoEvo VRE: > Apart from the insertion issues that I pointed out, I think it really important to be able to group by typology of ... Pasquale Pagano
06:33 PM Incident #8184: smaph app: connection timeout from remote server: (We are having some problems with our server. I am investigating the issue.) Marco Cornolti
02:53 PM Incident #8184: smaph app: connection timeout from remote server: Now we have this exception:
~~~
Querying http://wikisense.mkapp.it:80/tag/tag?lang=en&method=base&epsilon=0.2&min... Roberto Cirillo
02:04 PM Incident #8184: smaph app: connection timeout from remote server: There was an unplanned downtime that affected the connectivity of the whole Unipi. The service should be back now. Ca... Marco Cornolti
12:14 PM Incident #8184 (Closed): smaph app: connection timeout from remote server: I see timeout problems on smaph application hosted on:
~~~
smaph.d4science.org
~~~
In catalina log we have t... Roberto Cirillo
04:00 PM Task #7708: Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: The infra databases have been moved.
quota_dev_db will be moved in the next days Andrea Dell'Amico
03:21 PM Task #7708: Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: DBs created on postgresql-srv-dev.d4science.org.
survey-db-1 with user survey-db-u
survey-db-pre with user survey-... Andrea Dell'Amico
02:53 PM Task #7708 (In Progress): Please move Databases of dev2.d4science.org and preprod1.d4science.org to postgresql-srv-dev.d4science.org: Massimiliano Assante
01:01 PM VM Creation #8189: New VM for sdi RESTFul service: Seems ok to me. Fabio Sinibaldi
12:46 PM VM Creation #8189: New VM for sdi RESTFul service: Please @fabio.sinibaldi@isti.cnr.it could you check if the configuration schema is ok for you? Roberto Cirillo
12:44 PM VM Creation #8189 (Closed): New VM for sdi RESTFul service: The new vm should be called as:
~~~
sdi-d-d4s.d4science.org
~~~ Roberto Cirillo
12:05 PM VM Creation #8050 (Closed): VM creation for GeoServer upgrade tests: Seems ok. I'm gonna re open this ticket in case some misconfiguration is found. Fabio Sinibaldi
11:52 AM Upgrade #8006 (Planned): /gcube/preprod upgrade to gCube 4.4.0 (Common Apps): Roberto Cirillo
11:46 AM Upgrade #8180 (In Progress): Preprod Gateway upgrade to gCube 4.4 (Common Apps): Massimiliano Assante
11:42 AM Upgrade #8180 (Completed): Preprod Gateway upgrade to gCube 4.4 (Common Apps): Massimiliano Assante
11:46 AM Upgrade #8005: D4Science Infrastructure Upgrade to gCube 4.4: due to changes in a related task Massimiliano Assante
11:45 AM Upgrade #8181 (Completed): Preprod Gateway upgrade to gCube 4.4 (Community Apps): Massimiliano Assante
11:39 AM Upgrade #6739 (Completed): D4Science Infrastructure Upgrade to gCube 4.3: Massimiliano Assante
11:38 AM Upgrade #6739 (In Progress): D4Science Infrastructure Upgrade to gCube 4.3: Massimiliano Assante
11:38 AM Upgrade #6739 (Planned): D4Science Infrastructure Upgrade to gCube 4.3: Massimiliano Assante
11:26 AM VRE #7892: Creation of new VRE - EcoEvo: @miriam.baglioni@isti.cnr.it @leonardo.candela@isti.cnr.it I just updated the "Welcome Message" shown by EcoEvo Catal... Francesco Mangiacrapa
11:14 AM VM Creation #6849 (Feedback): Create an OrientDB cluster for production: The servers are running. I see that the cluster is active.
Andrea Dell'Amico

Apr 18, 2017

05:47 PM VM Creation #6849: Create an OrientDB cluster for production: orientdb01-d4s.d4science.org 146.48.123.101
orientdb02-d4s.d4science.org 146.48.123.102
orientdb03-d4s.d4science.or... Andrea Dell'Amico
05:42 PM VM Creation #6849 (In Progress): Create an OrientDB cluster for production: Andrea Dell'Amico
05:38 PM Task #3475 (Closed): Add 2 OrientDB instances: Andrea Dell'Amico
05:37 PM Task #5227 (Closed): Enable SSL on the orientdb instances: The configuration is correct, the documentation says.
Andrea Dell'Amico
04:55 PM Task #8128 (Closed): Please create empty postgres-db for Survey application: looks OK! Thanks Massimiliano Assante
12:05 PM Task #8128 (Feedback): Please create empty postgres-db for Survey application: Done.
db user: `survey-db-u`
Andrea Dell'Amico
11:56 AM Task #8128 (Closed): Please create empty postgres-db for Survey application: db name: survey-db
reachable from prod gateway cluster and dev3.d4science.org (edison.d4science.org) Massimiliano Assante
02:22 PM Support #8131 (Closed): downloadFileWS function issue: Hi Roberto,
I can not download anymore files from my workspace with the downloadFileWS function.it takes a long time... TAHA IMZILEN
12:52 PM Task #6972: Create website for D4Science Developers: A section for the Spatial Data Infrastructure (To be enhanced) and one for Developing on top of D4Science were added Massimiliano Assante

Apr 15, 2017

03:33 PM Task #4243: Migrate SSL certificate from GARR/TERENA to Let's Encrypt: Tommaso Piccioli wrote:
> Or we can go on with the INFN certificate for the services on manage.
Yes. Better, mayb... Andrea Dell'Amico

Apr 14, 2017

06:43 PM Task #4243: Migrate SSL certificate from GARR/TERENA to Let's Encrypt: Or we can go on with the INFN certificate for the services on manage. Tommaso Piccioli
05:44 PM Task #4243: Migrate SSL certificate from GARR/TERENA to Let's Encrypt: I was not able to make letsencrypt work on manage.d4science.org. The distribution is too old, even after having gathe... Andrea Dell'Amico
06:42 PM VM Creation #8050 (Feedback): VM creation for GeoServer upgrade tests: The VM has been configured. Some notes:
* Both java 7 and java 8 have been installed. Java 7 is de default, becaus... Andrea Dell'Amico
05:50 PM VM Creation #8050 (In Progress): VM creation for GeoServer upgrade tests: Andrea Dell'Amico
03:54 PM Task #8108 (Closed): Reconfigure smartfish.d4science.org to use letsencrypt certificates: Andrea Dell'Amico
03:49 PM Task #8108 (Feedback): Reconfigure smartfish.d4science.org to use letsencrypt certificates: The letsencrypt tool has been installed. The certificates will be issued when we will exit from the embargo.
Andrea Dell'Amico
03:29 PM Task #8108 (In Progress): Reconfigure smartfish.d4science.org to use letsencrypt certificates: Andrea Dell'Amico
01:01 PM Task #7655 (Closed): registry gcube: cronjob for restarting it: Done.
Andrea Dell'Amico
01:00 PM Task #7655 (In Progress): registry gcube: cronjob for restarting it: Andrea Dell'Amico
11:42 AM Incident #8116 (Closed): [SoBigData] Drupal error on LDAP authentication: Andrea Dell'Amico
11:41 AM Incident #8116: [SoBigData] Drupal error on LDAP authentication: Great, it works!
You can close the ticket...
Thanks! Vittorio Romano
11:13 AM Incident #8116: [SoBigData] Drupal error on LDAP authentication: Done.
Please ensure that the ldap configuration uses ldaps (port 636).
Andrea Dell'Amico
10:40 AM Incident #8116: [SoBigData] Drupal error on LDAP authentication: Yes, the IP address resolved by sobigdata.eu is 146.48.99.244, but if I connect via SSH to the server and try to conn... Vittorio Romano

Apr 13, 2017

11:50 PM Task #8040: Impossible to produce DWCA for a number of Families: As usual, it was nice to talk with VLIZ technicians: they have said that empty families and genus are normal in WoRMS... Gianpaolo Coro
07:05 PM Incident #8116 (Feedback): [SoBigData] Drupal error on LDAP authentication: Andrea Dell'Amico
07:04 PM Incident #8116 (In Progress): [SoBigData] Drupal error on LDAP authentication: The IP address is 146.48.99.244, is it correct? I added it to the firewall whitelist, I don't know why it was removed.
Andrea Dell'Amico
03:42 PM Incident #8116 (Closed): [SoBigData] Drupal error on LDAP authentication: Hi,
we have a problem on the sobigdata.eu website: LDAP user authentication is no longer working. The log refers:
... Vittorio Romano
06:52 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: We need a place writeable by the gcube user. Anything under /home/gcube is fine with me, better a subdirectory. `/hom... Andrea Dell'Amico
04:20 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: @lucio.lelii@isti.cnr.it told me that his script just needs the list of missing ids (no matter where the resources we... Costantino Perciante
01:56 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: And is the plugin meant to run the script that restores the scopes too? Or we run it as a secondary effect of the nag... Andrea Dell'Amico
12:15 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: but this script only adds all the scope to the selected resource. The check for the scope loss in the resource should... Lucio Lelii
05:25 PM Task #7613 (Closed): Sinchronization between portal and ldap doesn't work properly: fix in related ticket Massimiliano Assante
03:10 PM VM Creation #7855: Provide node to install GeoFence application: Reconfigured with the fixed scopes list. Let me know.
Andrea Dell'Amico
03:05 PM VM Creation #7855: Provide node to install GeoFence application: GeoFence application has been now integrated with SmartGears. Requested action will be reported on wiki for further a... Fabio Sinibaldi
02:26 PM Task #7899: Create a catalogue profile for EcoEvo VRE: ~~~
Moreover, dunno the real timeline of the VRE ... it was urgent and the urgency is about a possible paper.
~~~
... Miriam Baglioni
11:52 AM VRE #7892: Creation of new VRE - EcoEvo: @francesco.mangiacrapa@isti.cnr.it the following could be a possible welcome message. Thank you very much
'Welcome... Miriam Baglioni

Apr 12, 2017

08:23 PM Task #8109 (Closed): Provide a smartgears configuration that permits http -> https redirection while smartgears publish itself on the http port: Done. Now when the `http_redirect_to_https` variable is set to `True`, the container.xml configuration and the scopes... Andrea Dell'Amico
08:21 PM Task #8109 (In Progress): Provide a smartgears configuration that permits http -> https redirection while smartgears publish itself on the http port: Andrea Dell'Amico
08:20 PM Task #8109 (Closed): Provide a smartgears configuration that permits http -> https redirection while smartgears publish itself on the http port: To overcome a missing functionality while still providing a full https experience, the ansible configuration must sup... Andrea Dell'Amico
08:17 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Nagios was my suggestion for the following reason:
- it notifies when something happen
- it keeps track of the his... Pasquale Pagano
08:06 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Wy a nagios script anyway? Is it something that can be used as a check too?
Andrea Dell'Amico
04:28 PM Task #8103: a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Can you give us less information? With so many details we lose the joy of discovering new ways to mess up with our sy... Andrea Dell'Amico
04:00 PM Task #8103 (Closed): a nagios script must be scheduled every 24 h to add a list of resources to all scopes: Lucio Lelii
08:16 PM Task #8108 (Closed): Reconfigure smartfish.d4science.org to use letsencrypt certificates: The VM was not privisioned. Let's limit the provisioning to apache and letsencrypt.
Andrea Dell'Amico
08:03 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: Gianpaolo Coro wrote:
> I'm just testing the dataminer1-2-genericworker machines that seem to have issues. For sure ... Andrea Dell'Amico
03:48 PM VM Creation #7927: More DataMiner machines required in the GenericWorker cluster: The machines work very well and I was able to use them to run 3500 taxonomic searches in a very large repository. I'm... Gianpaolo Coro
04:05 PM Task #8104 (Closed): Merge the manage.research-infrastructures.eu users into ldap.d4science.org: We need to import the current active users into the new ldap server so that we can have them immediately operative.
Andrea Dell'Amico
03:52 PM Task #7900: Generating Darwin Core Archives via SPD: The last three Phylum cannot be generated due to issues on the WoRMS service. I have asked Unesco people to give it a... Gianpaolo Coro
03:33 PM VM Creation #7855: Provide node to install GeoFence application: smartgears deploys correctly now. The logs say that the geofence app fails.
Andrea Dell'Amico
03:16 PM VM Creation #7855: Provide node to install GeoFence application: I think I've understood the problem. I'll let you know asap.
Andrea Dell'Amico
02:43 PM VM Creation #7855: Provide node to install GeoFence application: There seems to be a mismatch between container tokens and declared tcp port.
In ghn.log I can see messages like
... Fabio Sinibaldi
03:28 PM VM Creation #7465: Please Create a VM to install SmartExecutor for SmartArea: The culprit was the script that gets the token. I did fix the container.xml generation but not the get-scopes script.... Andrea Dell'Amico
03:27 PM Incident #8096 (Closed): Several service endpoint disappeared from about 20-30 production scopes: Each of the four service endpoints above counts now 96 scopes (VRE/VO/RootVO) Massimiliano Assante
03:19 PM Incident #8096 (In Progress): Several service endpoint disappeared from about 20-30 production scopes: * The URI-Resolver resource, had about 65 scope instead of 96
* The Storage Manager and Accounting (Persistence) res... Massimiliano Assante
02:32 PM Incident #8096: Several service endpoint disappeared from about 20-30 production scopes: Here the scopes list where URI Resolver is present now
https://docs.google.com/spreadsheets/d/1uuwXSk0S7zw1CKBvr0C... Massimiliano Assante
02:32 PM Incident #8096 (Closed): Several service endpoint disappeared from about 20-30 production scopes: Following incident #8095 I noticed the URI-Resolver service endpoint disappeared from about 20 production scopes
H... Massimiliano Assante
03:17 PM Task #7654 (Closed): Configure logrotate for Literature Broker Service: Andrea Dell'Amico
02:46 PM Task #7899: Create a catalogue profile for EcoEvo VRE: @miriam.baglioni@isti.cnr.it thanks for the valuable feedback, yet tacking into account the application context (I ... Leonardo Candela
12:54 PM Task #7899: Create a catalogue profile for EcoEvo VRE: Some issues:
Is it possible to remove all the fields that should have a fixed value in the first page?
In the fir... Miriam Baglioni
12:49 PM Task #7899: Create a catalogue profile for EcoEvo VRE: Miriam Baglioni wrote:
> I have a couple of questions:
> In the insertion page the Licence field is associated to t... Leonardo Candela
10:26 AM Task #7899: Create a catalogue profile for EcoEvo VRE: I have a couple of questions:
In the insertion page the Licence field is associated to the information I am insertin... Miriam Baglioni
09:28 AM Task #7899: Create a catalogue profile for EcoEvo VRE: Sorry, I didn't push enter. Do not consider my precious posts Miriam Baglioni
09:20 AM Task #7899: Create a catalogue profile for EcoEvo VRE: Once you have written a tag there, you need to push enter to attach it to the item (the info note on the right side t... Costantino Perciante
09:03 AM Task #7899: Create a catalogue profile for EcoEvo VRE: sorry I forgot the attachment Miriam Baglioni
08:59 AM Task #7899: Create a catalogue profile for EcoEvo VRE: @costantino.perciante@isti.cnr.it It is not possible to publish. Now the error is related to the "Tag" field. I inser... Miriam Baglioni
02:46 PM Incident #8095 (Closed): the uri resolver resource is not present on IS in scope: /d4science.research-infrastructures.eu/FARM/GRSF_Admin: I restored this manually. Massimiliano Assante
02:27 PM Incident #8095 (In Progress): the uri resolver resource is not present on IS in scope: /d4science.research-infrastructures.eu/FARM/GRSF_Admin: Massimiliano Assante
02:26 PM Incident #8095 (Closed): the uri resolver resource is not present on IS in scope: /d4science.research-infrastructures.eu/FARM/GRSF_Admin: This causes the workspace recent documents not to work on the scope
~~~
2017-04-12 12:25:23,066 ERROR workspace.J... Massimiliano Assante
01:40 PM Task #8040: Impossible to produce DWCA for a number of Families: I will contact the WoRMS team to have this issue fixed. Meanwhile, using BiOnym I have checked the ASFIS species to s... Gianpaolo Coro
12:00 PM VRE #6532 (Released): Creation of new VRE - OpenAIRE-Connect_EAB: Up & running, Paolo and Franco as Managers
https://openaire-connect.d4science.org/explore Massimiliano Assante
11:59 AM VRE #6532 (Available): Creation of new VRE - OpenAIRE-Connect_EAB: Massimiliano Assante
11:53 AM VRE #6532 (In Progress): Creation of new VRE - OpenAIRE-Connect_EAB: Massimiliano Assante
11:34 AM VRE #6532 (Planned): Creation of new VRE - OpenAIRE-Connect_EAB: Massimiliano Assante
11:59 AM VRE #6531 (Released): Creation of new VRE - OpenAIRE-Connect_PSC: Up & running, Paolo and Franco as Managers
https://openaire-connect.d4science.org/explore Massimiliano Assante
11:58 AM VRE #6531 (Available): Creation of new VRE - OpenAIRE-Connect_PSC: Massimiliano Assante
11:34 AM VRE #6531 (In Progress): Creation of new VRE - OpenAIRE-Connect_PSC: Massimiliano Assante
11:31 AM VRE #6531 (Planned): Creation of new VRE - OpenAIRE-Connect_PSC: Massimiliano Assante
11:28 AM VRE #6534 (Released): Creation of new VRE - OpenAIRE-Connect_Networking: https://openaire-connect.d4science.org/group/openaire-connect_networking is up & running, @franco.zoppi@isti.cnr.it a... Massimiliano Assante
11:27 AM VRE #6534 (Available): Creation of new VRE - OpenAIRE-Connect_Networking: Massimiliano Assante
11:13 AM VRE #6534 (In Progress): Creation of new VRE - OpenAIRE-Connect_Networking: Massimiliano Assante
10:20 AM VRE #6534 (Planned): Creation of new VRE - OpenAIRE-Connect_Networking: Massimiliano Assante

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