Activity
From Mar 07, 2019 to Apr 05, 2019
Apr 05, 2019
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02:28 PM Task #16439: Update Records containing special Characters
- For some strange reason this issue comes from the GRSF KB (the data are erroneous in the KB).
The actions to proceed... -
11:30 AM Task #16439 (In Progress): Update Records containing special Characters
- I am sorry, by chance I found this other cases https://ckan-grsf-admin2.d4science.org/dataset/30208061-e58e-3b5b-ad74...
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- That's true. Only the legacy records have been updated.
The GRSF ones will be updated after proceeding with the bulk... -
- Thanks Yannis,
I am not sure if the fix has been already propagated to GRSF (RAM) records or only to the legacy reco... -
- You are right.
I'll make sure they are published in GRSF VRE as well. -
- ok, thanks
btw note that so far we have already 31 fishing unit approved in grsf admin:
**31 records found Status ... -
- Thanks.
You are right. For the time being, we are updating everything that needs to be updated in GRSF Admin and aft... -
- Thanks a lot, I checked a few of them, all fine. Then I made a search by "authority:INT:FFA" and I got 1,789 records ...
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- The corresponding GRSF Fishery records have been updated as proposed.-
Apr 04, 2019
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- Thanks a lot,
so from
Management Body/Authority(ies) Code: authority:NAT:SLB, System: grsf-org, Name: Forum Fis... -
- We can do that. Unfortunately, this change will affect 1789 GRSF fishery records that has to be updated.
I'll update... -
- Thanks a lot. I checked randomly a few fisheries and the fix seems fine.
One concern on **FFA** which should be **... -
- All the GRSF Fishery records have been updated in GRSF_Admin. The issue should be resolved now.
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- Yes of course. This is elaborated on #16375. After approving them, we'll update all the GRSF Stock records, so that o...
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- just a clarification, in case, the request is to bulk approve RAM records which are only stock/assessment unit type. ...
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- All the GRSF Fisheries have been updated in GRSF_Admin
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- All the records from RAM have been updated.
The issue seems to be fixed for the corresponding record (http://data.d...
Apr 03, 2019
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- great, thanks a lot, this is one of the more 'disturbing" bugs...
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- I investigated the issue and noticed that the missing timeseries exist in the GRSF KB but not in the catalog.
This ... -
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- There are 4 records from FishSource with this management entity that have been updated.
Obviously, the correspondin... -
- We face this because the harvested data (March 2018) were missing information about the management unit.
Since now ... -
- FIRMS records have been updated in GRSF Admin VRE.
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- In this task, we'll update the corresponding records from FIRMS.
After that we will update all the records in GRSF ... -
- The following should be updated:
* 39 records from FIRMS
* 197 records from GRSF ADMIN
* 16 records from GRSF P... -
- According to #12421#note-12 we have to update records that contain the following:
Country names
* Côte d'Ivoire
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- Update all the (Stocks and Fisheries) in GRSF Admin.
First we'll update the record in GRSF Admin VRE and then we'l... -
- Thanks Luca. Works as expected (http://data.d4science.org/ctlg/GRSF_Admin/5dda87ff-3440-3c89-a333-19dfb938c58b)
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10:54 AM Bug #16395: GRSF record titles are not updated
- @marketak@ics.forth.gr can you also test this issue?
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- Thanks Luca. It works as expected (http://data.d4science.org/ctlg/GRSF_Admin/e3177c4d-4b09-386d-a25f-001b4a82caf1)
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- @marketak@ics.forth.gr I updated again the service. Sorry for any inconvenience.
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- I've updated the management entities with the missing country codes.
In addition, I've updated the semantic IDs of ... -
- Thank you Merul for the answer. I was totally unaware of V4.
I will use that instead.
Apr 02, 2019
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- As soon as I deploy the new version which should fix issue #12421, can you also please test this?
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- I have found and fixed the issue. Ass soon as ETICS will compile the service I'll deploy the new version.
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04:47 PM Bug #13250: Honduran management organization acronym not appearing
- The docs will always be at https://www.fishsource.org/apipie. It should by default open the v4 docs - but something i...
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- thanks Merul, in the GRSF wiki I see we have this URL https://www.fishsource.org/apipie/
can you tell us which shou... -
- You're using the V2 version of the API. Not the V4. This is the latest version that has all modifications requested d...
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- This is what I get back from https://www.fishsource.org/api/bluebridge/v2/fisheries/3695
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{
"management_unit... -
- Not sure what you mean Yannis. The samples above in comment 23 show the data returned is ISO3, eg. USA not US.
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- well, in grsf we said standard should be iso3, if FishSource can provide directly iso3 codes, then it would be better...
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- Hi Merul, Thanks for the update.
I've just used the API and noticed that the countries are returned using their I... -
- The majority of the Management Units in FishSource have country information associated with the Organisations. As an ...
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- I've included that as well.
I've updated one record in GRSF ADMIN so you can see the citation at http://data.d4sci... -
- Sorry, I see now it is missing
**In: Global Record of Stocks and Fisheries (GRSF).**
> © D4Science.org. Nephr... -
- Thanks for the feedback. You are right. The updated citation is
> © D4Science.org. Nephrops norvegicus Northern N... -
- Dear Yannis, thanks a lot.
But please note that the title **[Title].** is still missing in the above proposal. -
- many many thanks
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- The corresponding GRSF fishery records (484 in number) have been updated in the GRSF KB.
As a proof-of-concept I hav... -
- I double checked and I think we should make it easier and aligned with any other international authorities.
Hence EC...
Apr 01, 2019
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- @marketak@ics.forth.gr thanks for your feedback. I'm investigating the issue.
Mar 29, 2019
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- This type of information (the ISO3 code of the country) is missing from the sources that have been harvested from Fis...
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- Ignore the following, my mistake
Yannis Marketakis wrote:
> The proper one should be authority:NAT:FWCC.
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- Aureliano Gentile wrote:
> In example here the iso3 country code for the authority is still missing http://data.d4sc... -
- Unfortunately, neither this option works
Just deleted and published again http://data.d4science.org/ctlg/GRSF_Admin/... -
- Unfortunately, the update does not update the resources.
Could it be an issue deleting the affected records and recr... -
- Thanks @luca.frosini@isti.cnr.it .
Just updated http://data.d4science.org/ctlg/GRSF_Admin/e3177c4d-4b09-386d-a25f-00... -
- I have deployed the latest version.
@marketak@ics.forth.gr can you please retry? -
- Thanks @luca.frosini@isti.cnr.it
Perfectly fine from my side -
- Before moving on with the update
@aureliano.gentile@fao.org can you confirm that the semantic identifier should be ... -
- Fixed.
As a side effect, there are 484 GRSF fishery records that need to be updated.
I've just triggered an upd... -
- The corresponding information has been corrected (manually) in the GRSF KB. More specifically the following records h...
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- Thanks for the update.
I carried out some updates and this is what we're delivering.
@aureliano.gentile@fao.org l... -
- FIRMS records (both stocks and fisheries) have been updated with the proper citation.
The updates are:
* When t... -
- Thanks Luca
Mar 28, 2019
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- I'll deploy the new version of the service as soon as ETICS will build the artifact.
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- Investigating the issue I found that the update methods have an explicit comment for this. For example:
~~~
// na... -
12:38 PM Bug #16395: GRSF record titles are not updated
- I just checked the above record (id=6306f86b-1987-3b60-89b4-e71c3d3981ce) on SOLR index. It was updated correclty yes...
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- I've updated around 400 GRSF records yesterday (including the one shown above)
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- I think it is a Solr index issue.
Did you update the record yesterday or right now? -
- We noticed the following while updating some GRSF records (see #16281#9)
When updating a record, the title of the ... -
- @marketak@ics.forth.gr I should have fixed the bug for all record field.
Unfortunately, I cannot test the issue on r... -
- Thanks Aureliano,
Perfectly clear. I'll proceed as you suggested.
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- In the example you provided http://firms.fao.org/fishery/xml/resource/10023/en
there is the creation date:
<f... -
- @aureliano.gentile@fao.org do you confirm that we should proceed with bullet 2 (remove modification date from the cit...
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- The published legacy records from FIRMS needs to be updated w.r.t. the guidelines (shown below as well)
[© FAO] [D... -
- The GRSF records have been updated. Although the fishery name and title (the fields) have been updated it seems that ...
Mar 27, 2019
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- You are right.
I'll update the GRSF records again. -
- thanks a lot, I checked two examples, http://data.d4science.org/ctlg/GRSF_Admin/5dda87ff-3440-3c89-a333-19dfb938c58b ...
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- In total we have updated the following:
* 426 fishery records coming from FishSource. For them we have added info... -
- Citation template for GRSF records
© [Copyright holder]. [Title]. ([Year]). In: Global Record of Stocks and Fishe... -
- Thanks, a colleague of mine is fixing such missing dates. The next FIRMS-to-GRSF data harvest won't have this problem...
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- Please run a bulk approval of **RAM records**, with the following criteria:
Types: Assessment Unit
Groups: Stoc... -
- Thanks Aureliano,
According to these we have to update:
* 39 records from FIRMS
* 197 records from GRSF ADM...
Mar 26, 2019
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- As per discussion on the 26 March 2019 https://support.d4science.org/projects/stocksandfisherieskb/wiki/19-03-26-GRSF...
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- Attached you will find the list with the stocks missing creation date.
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- yes, in some old files, sorry for that. I think in this case it should remain empty since the issue is on the source ...
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- Of course. Some indicative ones I found are:
* http://firms.fao.org/fishery/xml/resource/10122/en
* http://firms... -
- Thanks for your patience, can you please provide one or more example of missing year value so I can check what's wrong?
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- Some months ago, we have exchanged this doc (https://docs.google.com/document/d/1W7-GSTLFL28bZ8ejJC3O8Bi47kWIvvPCNCq5...
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- Here a list of accented words and characters found in FIRMS
**Country names**
* Côte d'Ivoire
* São Tomé e Prínc... -
- The issue disappeared only for the two records that are mentioned above (I updated only those).
For sure if we repu... -
- Thanks a lot to all, do you confirm the accented words issue is over for all of them, or do we need to republish or w...
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- Thank you
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- Perfectly fine.
Works as expected. -
- Thanks, I understand the problem of updating, but fixing a few of them randomly does not help much. Maybe @merul.pate...
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- Aureliano Gentile wrote:
> Thanks. The practical rule mentioned by Yannis "the type of the stock is "Assessment unit...
Mar 25, 2019
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- The patched service is available.
@marketak@ics.forth.gr, can you please try to update one of the identified records?
Mar 24, 2019
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- Thanks Marina,
if the species is not recognized, the system still keep it with "unk:" as coding system.
But in ... -
- Dear Mike,
Obviously no need to apologize, since the beginning of the GRSF we said that it would have helped also...
Mar 23, 2019
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- Thanks. The practical rule mentioned by Yannis "the type of the stock is "Assessment unit", whenever a stock assessme...
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- Sorry, I understand the comment was not clear enough. My point was that the legacy firms fact sheet was not updated i...
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- yes, thanks, please proceed at your convenience
Mar 22, 2019
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- OK I will update this (and the corresponding GRSF records).
If this is OK, we will do it for other cases as well (i.... -
- The issue is not clear to me here.
I see that the latest comment from @aureliano.gentile@fao.org is about "FAO 2018... -
- Of course. Just let me know when ready.
Mar 21, 2019
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- The GRSF Manage Widget has been updated with the new feature. A test will be performed and, if passed, this ticket wi...
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- @marketak@ics.forth.gr as soon I deploy the new version of the service can you try to republish one of the record att...
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- The bug has been solved. The service will be deployed as soon as ETICS build the artefact.
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- @marketak@ics.forth.gr yesterday I had a phone conference with @aureliano.gentile@fao.org about the citation.
If you...
Mar 20, 2019
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- A new requirement from: https://support.d4science.org/projects/stocksandfisherieskb/wiki/19-03-20-GRSF_tickets
In ... -
12:41 PM Bug #13289: biological stock being recognized as a marine resource
- Thank you, Yannis.
Both examples shown in note #10 above are Stocks/AssessmentUnits in FishSource, therefore should... -
- According to the GRSF rules the type of the stock is "Assessment unit", whenever a stock assessment is conducted and ...
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- Thanks a lot, I checked in the Wiki requirement https://support.d4science.org/projects/stocksandfisherieskb/wiki/GRSF...
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- I confirm that the sfp_gear exists in the source record.
@aureliano.gentile@fao.org can you please suggest the name ...
Mar 19, 2019
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- of the examples we have shared above, all are currently identified correctly as assessment units in bluebridge, excep...
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- WRT comment 8, the API is definitely returning the root record as an 'AssessmentUnit':...
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- Hi
Etrumeus teres is the scientific name of a species that is currently known to be only found in the Atlantic and... -
- I think this one is similar to #13250?
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- We have added an acronym for the Suriname Fisheries Department, so this is now being returned in the API:...
Mar 18, 2019
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- Our API does return nested Assessment Units, see for example the data returned for the *American Sea Scallop - US Atl...
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- I've checked the Fisheries endpoint for this fishery (https://www.fishsource.org/api/bluebridge/v4/fisheries/3547) an...
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- I've checked the *Stocks* endpoint and also the *Fisheries* endpoint (https://www.fishsource.org/api/bluebridge/v4/fi...
Mar 14, 2019
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- another example of an AU/stock in FS: https://www.fishsource.org/stock_page/2053 being recognized as a marine resourc...
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- Hi Merul
Handlines hand operated is a type of fishing gear created by SFP (within Hooks and lines group) and not r...
Mar 13, 2019
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- Hi Merul
the following record from Suriname:
http://data.d4science.org/ctlg/GRSF_Admin/6d27d693-878d-33ba-829a-f... -
- I checked the RAM source db V.4.35 and the capitalized names are in the "Stock" worksheet "stocklong" column.
In ... -
- This record contains a spelling error: it should be **Northwest**
http://data.d4science.org/ctlg/GRSF_Admin/40f5d27d... -
- For whatever reason two RAM records are without fao3alpha code
The species is **Cleisthenes herzensteini** and the...
Mar 08, 2019
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- In example here the iso3 country code for the authority is still missing http://data.d4science.org/ctlg/GRSF_Admin/f8...
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- Thanks, I trust that fix is applied to all records and future records generation
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- You are right!
Just updated it. -
- With many thanks for this work.
I see a strange "-" following the authority:NAT:HND in the semantic identifier of t... -
- Both records (the legacy and the GRSF one) have been updated.
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- It works as expected.
Thanks @luca.frosini@isti.cnr.it -
- @marketak@ics.forth.gr the patched service is available.
Mar 07, 2019
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- The service has been patched. We have to wait for ETICS build to update the service.
I'm reopening the upgrade ticket. -
- Yes, these fields (as well as the refers_to) are mandatory for GRSF records
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- Summarizing:
traceability_flag and status are not mandatory for legacy records. I'll not check for them.
Do I h... -
- The fields traceability_flag and status are optional for legacy records so remove them.
The field short_name is OK. -
- Hi @marketak@ics.forth.gr
thanks for your feedback.
apart refers_to, the code performs the following checks:
... -
- @luca.frosini@isti.cnr.it thanks for the update.
I am facing a similar issue. Now it fails because it is missing t... -
- @aureliano.gentile@fao.org I cannot find the errors you mentioned.
Taking for example line 9 from the XLS I see tha...
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