Feature #12278: Complete Citation development - StocksAndFisheriesKB - D4science

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Feature #12278

closed

Feature #10960: GRSF Record citation facility

Complete Citation development

Added by Aureliano Gentile about 7 years ago. Updated over 3 years ago.

Status:

Closed

Priority:

Normal

Assignee:

Yannis Marketakis

Target version:

GRSF

Start date:

Jul 31, 2018

Due date:

% Done:

Estimated time:

Description

The template for a citation of a GRSF record is the following (from GRSF TWG3 report, Feb. 2018):

© [Copyright holder]. Title. In: Global Record of Stocks and Fisheries (GRSF). [Publisher]. Version: [Version]. Updated [Update date]. [Date accessed and/or downloaded [Access date]]. [GRSF Record URL]. Database sources: [Database sources]. Sources citations: [Citations to the database sources]

So far such template is partially respected, see in example http://data.d4science.org/ctlg/GRSF_Admin/b14ca34c-7a23-31d1-bd4b-181d0bf0ca98

Copyright holder 2018. Consiglio Nazionale delle Ricerche, CNR. XXX MISSING In: Global Record of Stocks and Fisheries (GRSF). ; MISSING GRSF Record TITLE XXX Version: 1.0 Updated: June 27, 2018. Accessed: [Date accessed and/or downloaded]. http://data.d4science.org/ctlg/GRSF_Admin/b14ca34c-7a23-31d1-bd4b-181d0bf0ca98 [XXX Missing Database sources: XXX FishSource]
XXXX MISSING Sources citations: [Citations to the database sources] XXX

Files

Download all files

citationgrsf.JPG (28.1 KB) citationgrsf.JPG		Aureliano Gentile, Jul 31, 2018 02:15 PM
Stocks_missing_creation_date.txt (5.03 KB) Stocks_missing_creation_date.txt		Yannis Marketakis, Mar 26, 2019 02:54 PM

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Updated by Luca Frosini about 7 years ago

Tracker changed from Bug to Feature
Parent task set to #10960

@aureliano.gentile@fao.org I just recognized that another ticket exists for such a task see #10960.

I'll add it as a subtask

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Updated by Luca Frosini about 7 years ago

So, the new template is:

The actual value is:

Copyright holder 2018. Consiglio Nazionale delle Ricerche, CNR. Version: 1.0 Updated: June 27, 2018. Accessed: [Date accessed and/or downloaded]. http://data.d4science.org/ctlg/GRSF_Admin/b14ca34c-7a23-31d1-bd4b-181d0bf0ca98 [FishSource]

The citation for such a record should became :(missing parts are in bold, part to be removed in striked out)

© Copyright holder 2018. Consiglio Nazionale delle Ricerche, CNR. In: Global Record of Stocks and Fisheries (GRSF). [Publisher]. Version: 1.0 Updated: June 27, 2018. ~~Accessed:~~ [Date accessed and/or downloaded]. http://data.d4science.org/ctlg/GRSF_Admin/b14ca34c-7a23-31d1-bd4b-181d0bf0ca98
Database sources: [FishSource] . Sources citations: [Citations to the database sources]

The title part is not clear for me (I also checked https://support.d4science.org/projects/stocksandfisherieskb/wiki/GRSF_database_overview#Citation)

@aureliano.gentile@fao.org do I miss something?

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Updated by Luca Frosini about 7 years ago

Assignee changed from Luca Frosini to Yannis Marketakis

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Updated by Yannis Marketakis about 7 years ago

@aureliano.gentile@fao.org please explain what Sources citations: [Citations to the database sources] should be as well?

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Updated by Aureliano Gentile about 7 years ago

Title is the tile of the record we are citing! In example "Pomadasys jubelini Pomadasys incisus Brachydeuterus auritus Western Gulf of Guinea" and the url will be http://data.d4science.org/ctlg/GRSF_Admin/c58637dd-3a63-3e54-b132-e07f9ed34454

So it should be something like:

© CNR 2018. Pomadasys jubelini Pomadasys incisus Brachydeuterus auritus Western Gulf of Guinea. In: Global Record of Stocks and Fisheries (GRSF). Consiglio Nazionale delle Ricerche, CNR. Version: 1 Last Updated September 7, 2018. [Date accessed and/or downloaded 11 September 2018]. http://data.d4science.org/ctlg/GRSF_Admin/c58637dd-3a63-3e54-b132-e07f9ed34454

Database sources: [FIRMS].

Sources citations: © FAO 2000-2018. FAO CECAF Scientific Sub- Committee. CECAF Scientific advice 2005. Bigeye grunt, Sompat grunt, Bastard grunt - Cote d'Ivoire, Ghana, Togo and Benin. FIRMS Reports. In: Fisheries and Resources Monitoring System (FIRMS) [online]. Rome. Updated . [Cited 11 September 2018]. http://firms.fao.org/firms/resource/10226/en

Database sources are simply the acronyms of the sources (FIRMS, RAM, FishSource), in this case only FIRMS. We'll see later if we need to spell out in full or if enough like that as acronyms.

Source citations: RAM has a default one for all records, FIRMS and FishSource have their own which can be copied directly from sources. e.g. http://firms.fao.org/fi/common/format/popUpCitation.jsp?subSite=FIRMS&url=http%3A//firms.fao.org/firms/resource/10226/en (we can talk on that to provide more explanations).

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Updated by Yannis Marketakis about 7 years ago

Aureliano Gentile wrote:

Source citations: RAM has a default one for all records, FIRMS and FishSource have their own which can be copied directly from sources. e.g. http://firms.fao.org/fi/common/format/popUpCitation.jsp?subSite=FIRMS&url=http%3A//firms.fao.org/firms/resource/10226/en (we can talk on that to provide more explanations).

Please clarify how these citation will be made avaialbe (from the raw data). As you know we are harvesting XML data from FIRMs, so the citation message should be available in the XML sources as well.

The same occurs for FishShource.

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Updated by Aureliano Gentile about 7 years ago

this url http://firms.fao.org/fi/common/format/popUpCitation.jsp?subSite=FIRMS&url=http%3A//firms.fao.org/firms/resource/10226/en (where 10226 is the ID of the FIRMS source record) provides html code for the citation, possibly this is the easiest way but shall we talk on that to ease the discussion and find the easiest way or the best compromise?

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Updated by Yannis Marketakis about 7 years ago

The aforementioned URL points to " Transform failed: No doc value set for custom tag "

In any case, we should be able to harvest them using FIRMS services (that expose the contents as XML records)

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#10

Updated by Aureliano Gentile almost 7 years ago

I just noticed this citation and it says "FAO 2018" https://bluebridge.d4science.org/group/grsf_admin/data-catalogue?path=/dataset/489926ea-bacc-396f-923c-ad6f7a978465 - this is obviously wrong and if requirements https://support.d4science.org/projects/stocksandfisherieskb/wiki/GRSF_database_overview#Citation are not enough clear, please contact us for clarifications.

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#11

Updated by Luca Frosini over 6 years ago

@marketak@ics.forth.gr yesterday I had a phone conference with @aureliano.gentile@fao.org about the citation.
If you think there are no issues on creating the field in grsf-ws service I can try to manage it.

An issue could be that the service does not have enough info to create the field.

Let me know and assign the ticket to me if you think is feasible.

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#12

Updated by Yannis Marketakis over 6 years ago

The issue is not clear to me here.
I see that the latest comment from @aureliano.gentile@fao.org is about "FAO 2018".
According to the guidelines for FIRMS the citation should be:

[© FAO] [Date created]. [Title of content].

For the particular record we have recorded that the creation date is 2018. As a result the citation goes like this

FAO 2018. Senegal hake, Benguela hake - Morocco.

So I do not see the issue here. Is it something else I am missing?

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#13

Updated by Aureliano Gentile over 6 years ago

Sorry, I understand the comment was not clear enough. My point was that the legacy firms fact sheet was not updated in 2018 but much earlier. Anyway, we are going to have a call next week also on this matter and see if we find the way to finalize this citation service. Thanks

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#14

Updated by Yannis Marketakis over 6 years ago

Some months ago, we have exchanged this doc (https://docs.google.com/document/d/1W7-GSTLFL28bZ8ejJC3O8Bi47kWIvvPCNCq5HCVv0SE/edit?usp=sharing) to clarify on the citation fields.
I see that for FIRMS the "Date created" field is taken from /fi:FIGISDoc/fi:ObjectSource/fi:CoverPage/dcterms:Created (only year value).

I see that for several records this information does not exist. So the question is what do we do for these?

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#15

Updated by Aureliano Gentile over 6 years ago

Thanks for your patience, can you please provide one or more example of missing year value so I can check what's wrong?

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#16

Updated by Yannis Marketakis over 6 years ago

Of course. Some indicative ones I found are:

http://firms.fao.org/fishery/xml/resource/10122/en
http://firms.fao.org/fishery/xml/resource/10298/en
http://firms.fao.org/fishery/xml/resource/10118/en
http://firms.fao.org/fishery/xml/resource/10140/en

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#17

Updated by Aureliano Gentile over 6 years ago

yes, in some old files, sorry for that. I think in this case it should remain empty since the issue is on the source data and not in the GRSF nor in the citation mechanism. It is us FIRMS to fix the source data first. If you manage to provide a full list as possible then I can see if we can fix them quickly.

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#18

Updated by Yannis Marketakis over 6 years ago

File Stocks_missing_creation_date.txt Stocks_missing_creation_date.txt added

Attached you will find the list with the stocks missing creation date.

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#19

Updated by Aureliano Gentile over 6 years ago

Thanks, a colleague of mine is fixing such missing dates. The next FIRMS-to-GRSF data harvest won't have this problem anymore. For the time being the citation of these records will be without date of creation/update.

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#20

Updated by Aureliano Gentile about 6 years ago

Dear Yannis,

Ms Bracken completed the update of the above mentioned records by adding to all of them the creation date (/fi:FIGISDoc/fi:ObjectSource/fi:CoverPage/dcterms:Created).
This implies that in the next data harvest you should no longer encounter this issue for building the citation.
Please double check, then I guess this ticket can be closed.

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#21

Updated by Aureliano Gentile over 3 years ago

Status changed from New to Closed

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Custom queries

Feature #12278

Complete Citation development

Updated by Luca Frosini about 7 years ago

Updated by Luca Frosini about 7 years ago

Updated by Luca Frosini about 7 years ago

Updated by Yannis Marketakis about 7 years ago

Updated by Aureliano Gentile about 7 years ago

Updated by Yannis Marketakis about 7 years ago

Updated by Aureliano Gentile about 7 years ago

Updated by Yannis Marketakis about 7 years ago

Updated by Aureliano Gentile almost 7 years ago

Updated by Luca Frosini over 6 years ago

Updated by Yannis Marketakis over 6 years ago

Updated by Aureliano Gentile over 6 years ago

Updated by Yannis Marketakis over 6 years ago

Updated by Aureliano Gentile over 6 years ago

Updated by Yannis Marketakis over 6 years ago

Updated by Aureliano Gentile over 6 years ago

Updated by Yannis Marketakis over 6 years ago

Updated by Aureliano Gentile over 6 years ago

Updated by Aureliano Gentile about 6 years ago

Updated by Aureliano Gentile over 3 years ago