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From Jun 06, 2017 to Jul 05, 2017

Jul 05, 2017

08:24 PM Task #8987 (Closed): new user accounts on Gitorious
Andrea Dell'Amico
08:24 PM Task #8881 (Closed): DataMiner - Install FP-growth on DataMiner services
Andrea Dell'Amico
08:23 PM Task #8809 (Closed): Deploy Twitter Monitor Smart Executor Plugin
Andrea Dell'Amico
08:23 PM Task #8911 (Closed): Deploy SmartExecutor plugins for TwitterMonitor
Andrea Dell'Amico
08:13 PM Task #8875 (Closed): Enable VPN for external gCube Liferay Portal instance (EDISON)
I'm closing it. Open another one for the production configuration when you'll be ready.
Andrea Dell'Amico
07:47 PM Task #9189 (New): Temporary area via Workspace
the temporary area should be supported through the Workspace too.
This means that it should be visible in the wor...
Pasquale Pagano
07:22 PM Task #9102: Upgrade Couchbase Production Cluster
after many manual rebalance the first node finished the migration succesfully, 2017/07/05 19:20
couchbase06-d4s.d4...
Tommaso Piccioli
12:00 PM Task #9102 (In Progress): Upgrade Couchbase Production Cluster
Added
couchbase06.d4science.org couchbase version 4.5.1
removed
couchbase06-d4s.d4science.org couchbase version ...
Tommaso Piccioli
07:19 PM Upgrade #9153: Preprod Gateway upgrade to gCube 4.6 (Common Apps)
* A new custom field on the liferay Site should be added to handle the Terms of Use: Key: ToU Type: Integer (64-bit) ... Massimiliano Assante
06:52 PM Task #9119: User Context Data Uploader
Yes, definitely useful, but please let me rehighlight that this goes in pair with the crucial and key requirement whi... Emmanuel Blondel
06:31 PM Task #9119: User Context Data Uploader
Hi @emmanuel.blondel@fao.org, thanks for the explanation. I believe we need to find a solution first from the user pe... Pasquale Pagano
02:43 PM Task #9127: Remove no longer files stored in Jackrabbit before migration to postgres
Pasquale Pagano wrote:
> If we can run it on the production workspace, why we have to wait fro gcube 4.6 rollout?
...
Costantino Perciante
02:37 PM Task #9127: Remove no longer files stored in Jackrabbit before migration to postgres
Costantino Perciante wrote:
> We managed to free up more or less the same space in a couple of hours on a snapshotte...
Pasquale Pagano
12:42 PM Task #9127 (In Progress): Remove no longer files stored in Jackrabbit before migration to postgres
We managed to free up more or less the same space in a couple of hours on a snapshotted workspace. Valentina's script... Costantino Perciante

Jul 04, 2017

08:17 PM Task #9119: User Context Data Uploader
Thanks Lino, the starting point of this use case is the capacity to input a local file (from user's machine filesyste... Emmanuel Blondel
07:36 PM Task #9119: User Context Data Uploader
I am changing the tracker since this issue does not seem to me related to a support request.
As far as @emmanuel....
Pasquale Pagano
04:19 PM Task #9119: User Context Data Uploader
Thanks for your reply and also thanks for linking me with the massimiliano.assante@isti.cnr.it for support.
I have...
Debhsish Bhakta
02:20 PM Task #9119: User Context Data Uploader
Debhsish Bhakta is not member of the BlueBRIDGEProject VRE, this is why cannot access blueBRiDGE tickets. Massimiliano Assante
02:10 PM Task #9119: User Context Data Uploader
@massimiliano.assante@isti.cnr.it can you recall what @debhasish.bhakta@grida.no should do to have access to BlueBrid... Emmanuel Blondel
08:01 PM VM Creation #8567 (Feedback): New VM to host the EFG D-Net service
The VM is ready. There's a reverse proxy before tomcat, and it expects an app called `efg`.
The service is reachable...
Andrea Dell'Amico
05:40 PM VM Creation #8567 (In Progress): New VM to host the EFG D-Net service
hostname and IP address: dnet-prod.efg.d4science.org 146.48.122.128 Andrea Dell'Amico
07:42 PM Support #9129 (Closed): deploy jar
I am going to close the support request since no feedback was provided in the last day. I remember you that we have S... Pasquale Pagano
06:48 PM Task #9156 (Closed): Removal of "Moved" VREs Folder
the following VREs have been moved from gCubeApps to FARM, therefore the VRE Folder associated in gCubeApps must be r... Massimiliano Assante
06:43 PM Task #9149 (Closed): Move D4Research/RubRIcA VRE under ParthenosVO
Task completed with success Massimiliano Assante
05:04 PM Task #9149: Move D4Research/RubRIcA VRE under ParthenosVO
VRE undpeploy started Massimiliano Assante
03:56 PM Task #9149 (Closed): Move D4Research/RubRIcA VRE under ParthenosVO
The Parthenos RubRIcA VREwas created under D4Research VO since ParthenosVO wasn't existing at the time, now that we ... Massimiliano Assante
05:22 PM Task #9155 (Closed): Modify the tomcat logger so that it reports the remote client IP in the access log
Changed the tomcat and tomcat-multiple-instances templates.
The behaviour can be reverted setting the variable `to...
Andrea Dell'Amico
05:15 PM Task #9155 (In Progress): Modify the tomcat logger so that it reports the remote client IP in the access log
We already set the X-Forwarded-For header, so we can exploit it. We need to change the `pattern` definition inside th... Andrea Dell'Amico
05:13 PM Task #9155 (Closed): Modify the tomcat logger so that it reports the remote client IP in the access log
Right now it reports the reverse proxy host (usually localhost).
Andrea Dell'Amico
04:51 PM Upgrade #9153 (Completed): Preprod Gateway upgrade to gCube 4.6 (Common Apps)
Massimiliano Assante
04:49 PM Upgrade #9152 (Completed): D4Science Gateways upgrade to gCube 4.6
* A new custom field on the liferay Site should be added to handle the Terms of Use: Key: ToU Type: Integer (64-bit) ... Massimiliano Assante
04:46 PM Upgrade #9151 (Completed): /gcube/preprod upgrade to gCube 4.6.0 (Common Apps)
Massimiliano Assante
04:44 PM Upgrade #9150 (Completed): D4Science Infrastructure Upgrade to gCube 4.6
gCube 4.6.0 Upgrade plan of D4Science Infrastructure Massimiliano Assante
04:02 PM Task #9146 (In Progress): ResourceManager: upgrade servicemap on all the production instances
Roberto Cirillo
03:21 PM Task #9146 (Closed): ResourceManager: upgrade servicemap on all the production instances
In order to maintain the cross-vo resources aligned, it's needed to update the common-scope-maps library on all the R... Roberto Cirillo
03:51 PM Task #9148 (Closed): Align mandatory resources uunder d4s
Roberto Cirillo
03:36 PM Task #9148 (In Progress): Align mandatory resources uunder d4s
Roberto Cirillo
03:25 PM Task #9148 (Closed): Align mandatory resources uunder d4s
It's needed to align all the mandatory resources under the d4science.research-infrastructures.eu infrastructure.
The...
Roberto Cirillo
12:55 PM Task #457 (Closed): A new backup server
Andrea Dell'Amico
12:40 PM VM Creation #9143 (Closed): VM for Parthenos standardization survival kit application
Following ticket https://support.d4science.org/issues/8894 we would need to start the creation of this VM Massimiliano Assante

Jul 03, 2017

06:21 PM Task #9132 (In Progress): Dismiss the PC used as a server by the D-Net team
Andrea Dell'Amico
06:08 PM Task #9132 (Closed): Dismiss the PC used as a server by the D-Net team
dlib34.isti.cnr.it (pc-labruzzo.isti.cnr.it) is used by the team as a general purpose server and playground.
Let's ...
Andrea Dell'Amico
06:18 PM Task #9134 (Closed): Move everything from dlib34.isti.cnr.it to playground-t.dnet.d4science.org
Software, data, scripts, whatever Andrea Dell'Amico
06:16 PM VM Creation #9133 (Closed): Create a VM to replace dlib34.isti.cnr.it
Andrea Dell'Amico
06:11 PM VM Creation #9133 (Closed): Create a VM to replace dlib34.isti.cnr.it
Andrea Dell'Amico
06:10 PM Task #9104: data.d4science: remove rootLogger inside webapps
@roberto.cirillo@isti.cnr.it I just deployed the applications reported above (uri-resolver, gis-viewer-app and worksp... Francesco Mangiacrapa
05:28 PM Task #9104: data.d4science: remove rootLogger inside webapps
The file log4j.properties has been removed for:
uri-resolver RN: 150699 pom version updated at 1.13.0
gis-viewer-...
Francesco Mangiacrapa
04:51 PM Task #9104 (In Progress): data.d4science: remove rootLogger inside webapps
Francesco Mangiacrapa
02:42 PM Task #9115 (In Progress): VRE Modeler fails to undeploy VREs under gCubeApps
I had removed them manually. I had deleted the GenericResources but, in this way, not all the resources were correctl... Roberto Cirillo
12:44 PM Incident #9128 (Closed): Recent Documents Portet takes ages to show the files in any VRE
Jackrabbit has been restarted and Recent Documents Portlet is now working. Valentina Marioli
11:43 AM Incident #9128 (In Progress): Recent Documents Portet takes ages to show the files in any VRE
Valentina Marioli
11:07 AM Incident #9128 (Closed): Recent Documents Portet takes ages to show the files in any VRE
The problem is that home library takes ages or just does not return at all any file Massimiliano Assante
12:43 PM Support #9129 (Feedback): deploy jar
Done.
I had to remove the slf4j classes from your jar file because they conflicted with the smartexecutor ones.
Andrea Dell'Amico
11:37 AM Support #9129 (Closed): deploy jar
Hi Andrea,
coul you deploy the jar for smartMeteoexcutor.?
You find the file at the link https://goo.gl/uzWtMJ
Th...
Loredana Versienti
09:50 AM Task #9127 (Closed): Remove no longer files stored in Jackrabbit before migration to postgres
Before MongoDB (the actual storage used behind the workspace), files were stored into jackrabbit itself (through the ... Costantino Perciante

Jul 01, 2017

06:20 PM Task #9119: User Context Data Uploader
Thank you for your reply.
I apologize for creating a separate ticket apart from “Project Activity #7554” ticket be...
Debhsish Bhakta

Jun 30, 2017

06:17 PM Upgrade #9101 (Completed): Upgrade Couchbase DEV Cluster
migration completed, cluster is now couchbase02-d-d4 and couchbase03-d-d4s, with couchbase community server version 4... Tommaso Piccioli
12:30 PM Upgrade #9101: Upgrade Couchbase DEV Cluster
first node migrated, second node on-going (added a new couchbase02-d-d4s to the cluster and removed couchbase01-d-d4s) Tommaso Piccioli
06:16 PM Task #9123: MongoDB: upgrade dev cluster to version 3.2
@tommaso.piccioli@isti.cnr.it I could stop the mongodb nodes when you are ready. Please tell me when you are ready t... Roberto Cirillo
06:10 PM Task #9123 (Closed): MongoDB: upgrade dev cluster to version 3.2
The upgrade will be done in the following way:
* Upgrade secondary members of the replica set.
* Step down the ...
Roberto Cirillo
06:09 PM Task #9122 (New): Upgrade MongoDB to 3.4 version
We should upgrade our mongoDB clusters to version 3.2. Now we have installed the version 3.0, so this upgrade can be ... Roberto Cirillo
05:04 PM Task #9119: User Context Data Uploader
I thought i had replied, but my answer got stuck because Lino was faster to reply :-)
My first comment is about th...
Emmanuel Blondel
04:08 PM Task #9119: User Context Data Uploader
By reading this ticket I cannot figure our which support do you need. I am tentatively assigning the ticket to Emmanu... Pasquale Pagano
03:54 PM Task #9119 (Closed): User Context Data Uploader
With reference to the original ticket (Project Activity #7554) I have some suggestion
**1.User input as MPs (i.e sha...
Debhsish Bhakta
04:24 PM Task #9121 (Closed): VREs deployed on FARM have disappeared from VRE-Modeler
Yesterday I created two new VREs for the SMEs in WP6 in FARM VO.
* STRATOS AQUACULTURES
* MARKELLOS_Aquacuture
...
Massimiliano Assante
01:58 PM Task #461 (Closed): Nagios and ganglia monitoring for the backup servers
It's working.
Andrea Dell'Amico
01:52 PM Task #461 (Feedback): Nagios and ganglia monitoring for the backup servers
The checks are active.
Andrea Dell'Amico
12:06 PM Task #461: Nagios and ganglia monitoring for the backup servers
nagios: https://exchange.nagios.org/directory/Plugins/Backup-and-Recovery/BackupPC/check_backuppc-(new)/details
Andrea Dell'Amico
01:08 PM Task #8749 (Closed): Create Resource Registry Cluster
Andrea Dell'Amico
12:52 PM Task #9115 (Closed): VRE Modeler fails to undeploy VREs under gCubeApps
The 3 VREs running on the following scopes, respectively:
/d4science.research-infrastructures.eu/gCubeApps/Ellinik...
Massimiliano Assante
12:40 PM Incident #8903 (Closed): Cannot move shared folder into private folder
The fix will be released in gCube 4.6. Valentina Marioli
11:09 AM Incident #8903: Cannot move shared folder into private folder
any update on this? Roberto Cirillo
12:03 PM Task #483 (Rejected): Add iptables rules to the backup server
Andrea Dell'Amico
11:44 AM VM Creation #8716 (Closed): GeoServer dedicated VM for protectedareaimpactmaps
Andrea Dell'Amico
11:43 AM VM Creation #8907 (Closed): geoserver-aquaculture-pre.d4science.org
Andrea Dell'Amico
11:41 AM VM Creation #8854 (Closed): Create a clone of CKAN instance for SBD
Andrea Dell'Amico
11:39 AM Task #8809 (Feedback): Deploy Twitter Monitor Smart Executor Plugin
Andrea Dell'Amico
11:39 AM Task #8809 (In Progress): Deploy Twitter Monitor Smart Executor Plugin
Andrea Dell'Amico
11:36 AM Task #8750 (Closed): Create Accounting Service Cluster
Andrea Dell'Amico
11:34 AM Task #8992 (Closed): OrientDB does not restart when the certificate is renewed
Andrea Dell'Amico

Jun 29, 2017

04:54 PM Upgrade #8648 (Completed): D4Science Infrastructure Upgrade to gCube 4.5
Roberto Cirillo
04:53 PM Upgrade #8648 (In Progress): D4Science Infrastructure Upgrade to gCube 4.5
Roberto Cirillo
04:53 PM Upgrade #8868 (Completed): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
04:40 PM Incident #8986 (Closed): Smaph app: error from remote werver
It's ok now. Sorry for the delay Roberto Cirillo
04:36 PM Task #6297 (Closed): Smaph webapp: Nagios check fails
Roberto Cirillo
01:10 PM Task #5497 (Closed): Move some infrastructure services to the ganeti cluster
No more migrations. The ganeti cluster will be dismissed and the hypservisors that are not hardware virtualization ca... Andrea Dell'Amico
12:40 PM Task #9104 (Closed): data.d4science: remove rootLogger inside webapps
In order to have only one log4j properties definition on the following hosts:
~~~
data1-d4s.d4science.org
data2-...
Roberto Cirillo
12:39 PM Upgrade #9101 (In Progress): Upgrade Couchbase DEV Cluster
Tommaso Piccioli
12:39 PM Upgrade #9101 (Planned): Upgrade Couchbase DEV Cluster
Tommaso Piccioli
12:25 PM Upgrade #9101: Upgrade Couchbase DEV Cluster
Added couchbase03-d-d4s to the cluster and removed couchbase02-d-d4s, after that when you start the requested rebalan... Tommaso Piccioli
11:54 AM Upgrade #9101 (Completed): Upgrade Couchbase DEV Cluster
Luca Frosini
11:55 AM Task #9102 (Closed): Upgrade Couchbase Production Cluster
Luca Frosini
10:39 AM Task #6242 (Closed): Enable D4Science "Geo services" on D4Research VO to support Data Miner geo algorithms
I guess this ticket can be closed. We have now several "geo services" cluster running on D4Research VO. I'm going to ... Roberto Cirillo
10:14 AM Task #9017 (Rejected): New MongoDB Cluster for preprod
Roberto Cirillo

Jun 28, 2017

06:11 PM Task #8911 (Feedback): Deploy SmartExecutor plugins for TwitterMonitor
The smart executor plugins and the php tools have been installed on twittermon1.d4science.org
Andrea Dell'Amico
04:20 PM Task #8911: Deploy SmartExecutor plugins for TwitterMonitor
OK, so I'll provision one node only. The other VM will be dismissed, I'll create a new one if it will be needed.
Andrea Dell'Amico
04:02 PM Task #8911: Deploy SmartExecutor plugins for TwitterMonitor
Currently, the best choice is to have only one node containing all the software. Salvatore Minutoli
03:21 PM Task #8911 (In Progress): Deploy SmartExecutor plugins for TwitterMonitor
Some questions.
We have a total of three nodes right now, two of them are going to run the smartexecutor plugins.
I...
Andrea Dell'Amico
04:30 PM Task #9093 (Closed): Dismiss edison.d4science.org alias dev3.d4science.org VM
dev3.d4science.org deleted Tommaso Piccioli
02:08 PM Task #9093: Dismiss edison.d4science.org alias dev3.d4science.org VM
those are related to the EDISON VO which will remain in CNR premises Massimiliano Assante
01:36 PM Task #9093 (In Progress): Dismiss edison.d4science.org alias dev3.d4science.org VM
I am taking a backup now.
...and what about registry-edison.d4science.org and collector-edison.d4science.org?
Tommaso Piccioli
12:43 PM Task #9093 (Closed): Dismiss edison.d4science.org alias dev3.d4science.org VM
edison.d4science.org alias dev3.d4science.org VM can be dismissed, please do save a snapshot of the disk though, so t... Massimiliano Assante
12:45 PM Task #8591 (Closed): Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
The new VO is in place Roberto Cirillo
12:44 PM Task #9092 (Closed): Add VREModeler instance to ParthenosVO
Roberto Cirillo
12:33 PM Task #9092 (In Progress): Add VREModeler instance to ParthenosVO
Roberto Cirillo
12:32 PM Task #9092 (Closed): Add VREModeler instance to ParthenosVO
We could share the following VREModeler instance in ParthenosVO:
~~~
node44.p.d4science.research-infrastructure...
Roberto Cirillo
12:43 PM Task #8891: Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
Since the migration is complete (on https://dev.datasciencepro.eu), we are going to dismiss the VM hosting the edison... Massimiliano Assante
12:28 PM Task #9066 (Closed): ParthenosVO: Install IS-Collector and ResourceManager services
Roberto Cirillo
12:16 PM Support #9014 (Closed): EcoEvo VRE modifications
Everything is file. Thank you very much! Miriam Baglioni
11:28 AM Support #9014 (Feedback): EcoEvo VRE modifications
Done points 1, 2 and 3.
You can see https://ckan-ecoevo.d4science.org/
About point 4, you could use the post prov...
Francesco Mangiacrapa
10:45 AM Support #9014 (In Progress): EcoEvo VRE modifications
Francesco Mangiacrapa
11:43 AM Support #9086 (Closed): Developer access to org.gcube.investment-analysis.techno-economic-analysis-model etics component configuration
I got the access. Thank you. Konstantinos Giannakelos
11:40 AM Support #9086 (Feedback): Developer access to org.gcube.investment-analysis.techno-economic-analysis-model etics component configuration
done, please check Gabriele Giammatteo
11:32 AM Support #9086 (Closed): Developer access to org.gcube.investment-analysis.techno-economic-analysis-model etics component configuration
Hi Gabriele, can you please give write access to org.gcube.investment-analysis.techno-economic-analysis-model etics c... Dimitris Katris
11:30 AM Task #9080 (Closed): Infrastructure-monitor: Enable new VO ParthenosVO
The ParthenosVO is present, the list i s ordered alphabetically, so it is listed right after OpenAire VO Massimiliano Assante
10:50 AM Task #9080: Infrastructure-monitor: Enable new VO ParthenosVO
Yesterday night the new VO was present in the following monitor: https://pre.d4science.org/infrastructure-monitor
No...
Roberto Cirillo

Jun 27, 2017

08:03 PM Task #8858 (Closed): Monitor OrientDB instances
The handler to manage the restarts has been added. On the parthenos instance too.
Andrea Dell'Amico
06:47 PM Task #9066 (In Progress): ParthenosVO: Install IS-Collector and ResourceManager services
The IS-Collector service has been successfully installed Roberto Cirillo
03:02 PM Task #9066 (Paused): ParthenosVO: Install IS-Collector and ResourceManager services
Roberto Cirillo
02:56 PM Task #9066 (In Progress): ParthenosVO: Install IS-Collector and ResourceManager services
Roberto Cirillo
02:22 PM Task #9066 (Closed): ParthenosVO: Install IS-Collector and ResourceManager services
The new IS-Collector instance should be installed on:
~~~
collector-parthenosvo.d4science.org:8080
~~~
The ne...
Roberto Cirillo
06:46 PM Task #9067 (Closed): ParthenosVO: install Registry and Notifier services
Roberto Cirillo
02:23 PM Task #9067 (Closed): ParthenosVO: install Registry and Notifier services
The services will be deployed on the following VM:
~~~
registry-parthenosvo.d4science.org
~~~
Roberto Cirillo
06:23 PM VM Creation #9003 (Closed): Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
Massimiliano Assante
06:23 PM Task #8566 (Closed): "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
"Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL went fine Massimiliano Assante
05:46 PM Task #9080 (In Progress): Infrastructure-monitor: Enable new VO ParthenosVO
Massimiliano Assante
05:17 PM Task #9080 (Closed): Infrastructure-monitor: Enable new VO ParthenosVO
You can find the updated common-scope-maps (1.7.0-SNAPSHOT) on our nexus. Roberto Cirillo
05:27 PM VM Creation #8990: new instance of FusionRegistry in production
I checked the static configuration and it's identical on the two instances. It has been provisioned so it's what I ex... Andrea Dell'Amico
03:41 PM VM Creation #8990 (In Progress): new instance of FusionRegistry in production
Dear Andrea,
probably some more steps are needed to obtain the same configuration of the dev instance (https://fus...
Ciro Formisano
04:26 PM Support #9058 (Closed): Error in workspace of OpenAIRE-Connect coordinator
The issue has been fixed. The special chars have been removed from Jackrabbit, replacing square brackets with round b... Valentina Marioli
02:09 PM Support #9058: Error in workspace of OpenAIRE-Connect coordinator
I could reproduce the problem, it is due to the fact that with the new checks on folder names the following chars are... Massimiliano Assante
02:00 PM Support #9058 (In Progress): Error in workspace of OpenAIRE-Connect coordinator
Massimiliano Assante
01:03 PM Support #9058 (Closed): Error in workspace of OpenAIRE-Connect coordinator
Attached a screenshot of the Error. It gives the same response for every folder in OpenAIR-Connect coordinator.
Miriam Baglioni
03:33 PM VM Creation #8960 (Closed): Provide new VM collector-parthenosvo.d4science.org
openjdk 1.7 java installed Tommaso Piccioli
03:06 PM VM Creation #8960 (In Progress): Provide new VM collector-parthenosvo.d4science.org
We need the jdk 7 (OpenJDK is ok) as specified in the description. I've found the following version:
~~~
gcube@c...
Roberto Cirillo
03:31 PM VM Creation #8959: Provide new VM registry-parthenosvo.d4science.org
openjdk 7 java installed Tommaso Piccioli
03:10 PM Task #9060 (Closed): Changes to the EGI VMs contextualization script
Information System has been updated as well. Nunzio Andrea Galante
02:42 PM Task #9060: Changes to the EGI VMs contextualization script
Thanks Andrea. New references to the context scripts are the following:
- Prod: http://data.d4science.org/MVoyZ2NIRG...
Nunzio Andrea Galante
01:36 PM Task #9060: Changes to the EGI VMs contextualization script
@nunzioandrea.galante@eng.it can you change the fhn-manager so that it uses the new script? Andrea Dell'Amico
01:35 PM Task #9060 (Feedback): Changes to the EGI VMs contextualization script
I'm attaching a contextualization script that fixes all the three problems. It's the one used in dev, but the others ... Andrea Dell'Amico
01:26 PM Task #9060 (In Progress): Changes to the EGI VMs contextualization script
Andrea Dell'Amico
01:25 PM Task #9060 (Closed): Changes to the EGI VMs contextualization script
The EGI dataminer images available right now need a manual intervention after the activation.
There are three prob...
Andrea Dell'Amico
02:39 PM Task #9065: ParthenosVO: provide the ServiceMap
I've updated the common-scope-maps to version 1.0.7 Roberto Cirillo
02:38 PM Task #9065 (Closed): ParthenosVO: provide the ServiceMap
Roberto Cirillo
02:25 PM Task #9065 (In Progress): ParthenosVO: provide the ServiceMap
Roberto Cirillo
02:18 PM Task #9065 (Closed): ParthenosVO: provide the ServiceMap
It's needed to create the new ServiceMap file for the Edison VO and to upgrade the common-scope-maps library with the... Roberto Cirillo
02:14 PM Task #8591 (In Progress): Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Roberto Cirillo
12:42 PM Task #9052 (Closed): Fix the ssh accesses on the couchbase nodes
Tommaso added your keys on all the production nodes.
I just aligned the dev nodes too, and removed Alessandro's key.
Andrea Dell'Amico
10:04 AM Task #9052 (Closed): Fix the ssh accesses on the couchbase nodes
The new maintainer is Luca Frosini, while Roberto Cirillo must always have access to the d4science nodes.
Alessand...
Andrea Dell'Amico
10:05 AM Task #8987: new user accounts on Gitorious
Thank you, @andrea.dellamico@isti.cnr.it .
My user is ok and I've changed the password too.
Maria Di Girolamo
09:33 AM Support #9014: EcoEvo VRE modifications
Please, could you take care of this? It is quite urgent. Miriam Baglioni

Jun 26, 2017

10:13 PM Incident #9044 (Closed): File Delete operation is not working with the Workspace
It works, thanks. Gianpaolo Coro
07:02 PM Incident #9044 (Feedback): File Delete operation is not working with the Workspace
Jackrabbit has been restarted and the rest APIs are now working. The issue seemed due to a problem retrieving the ser... Valentina Marioli
06:56 PM Incident #9044 (In Progress): File Delete operation is not working with the Workspace
Valentina Marioli
04:27 PM Incident #9044: File Delete operation is not working with the Workspace
I see the following exception in catalina.out of workspace-repository node:
~~~
26.06.2017 16:22:50.794 [ajp-bio-...
Roberto Cirillo
04:19 PM Incident #9044 (Closed): File Delete operation is not working with the Workspace
The Delete operation returns OK but the file is not really deleted. I'm using the statistical.manager user on the /Ho... Gianpaolo Coro
07:03 PM Task #8858 (In Progress): Monitor OrientDB instances
The nagios monitoring is active on orientdb01-d4s.d4science.org. In the next days I'll add a handler to manage the re... Andrea Dell'Amico
05:01 PM VM Creation #8960 (Closed): Provide new VM collector-parthenosvo.d4science.org
collector-parthenosvo.d4science.org ready Tommaso Piccioli
05:01 PM VM Creation #8959 (Closed): Provide new VM registry-parthenosvo.d4science.org
registry-parthenosvo.d4science.org ready Tommaso Piccioli
04:47 PM Task #8987 (Feedback): new user accounts on Gitorious
Andrea Dell'Amico
04:28 PM Task #8987 (In Progress): new user accounts on Gitorious
Andrea Dell'Amico
03:37 PM VM Creation #8990 (Feedback): new instance of FusionRegistry in production
Lucio Lelii wrote:
> You must exclude gcube authorization in gcube-app.xml file adding this tag
>
> ~~~
> <exclu...
Andrea Dell'Amico
03:13 PM VM Creation #8990: new instance of FusionRegistry in production
You must exclude gcube authorization in gcube-app.xml file adding this tag
~~~
<exclude>/*</exclude>
~~~
Lucio Lelii
02:35 PM VM Creation #8990: new instance of FusionRegistry in production
The service is on line, but there's a problem with the authorization.
The gcube-app.xml file reads:
~~~
<applica...
Andrea Dell'Amico
12:57 PM VM Creation #8990: new instance of FusionRegistry in production
Pasquale Pagano wrote:
> Yes, i think so. It should bee the default on all production instances.
OK. I'm adding a...
Andrea Dell'Amico
11:14 AM Incident #9008 (Closed): algorithmsBot/runAlgorithmsBot.sh going berserk
The problem was due to a missing resource on gCubeApps scope (DataAccess-HomeLibraryWebapp). For this reason it was n... Roberto Cirillo
11:10 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
Massimiliano Assante wrote:
> the overall time to complete the procedure is much higher than before, about 7 h for t...
Andrea Dell'Amico
11:02 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
Costantino Perciante wrote:
> it has been still used a local db. Perhaps both VMs have less RAM/CPU than before @and...
Andrea Dell'Amico
10:28 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
it has been still used a local db. Perhaps both VMs have less RAM/CPU than before @andrea.dellamico@isti.cnr.it ? Costantino Perciante
10:21 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
the overall time to complete the procedure is much higher than before, about 7 h for the migration and about 6h for t... Massimiliano Assante
10:52 AM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Roberto Cirillo wrote:
> Massimiliano Assante wrote:
> > Is the ParthenosVO ready? @roberto.cirillo@isti.cnr.it we'...
Roberto Cirillo
10:40 AM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Massimiliano Assante wrote:
> Is the ParthenosVO ready? @roberto.cirillo@isti.cnr.it we're late
There are two sub...
Roberto Cirillo

Jun 25, 2017

09:23 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
jackrabbit restarted at 15:50 (24/06/17) after consistency check and fix (it seems ok) Costantino Perciante

Jun 24, 2017

01:27 PM Support #9014: EcoEvo VRE modifications
For point two, it is ok to replace it everywhere. Thanks Miriam Baglioni
08:38 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
migration ended at 22:39 23/06/17
consistency check/fix start running at 8:37 24/06/17
Costantino Perciante

Jun 23, 2017

07:37 PM VM Creation #8990: new instance of FusionRegistry in production
Yes, i think so. It should bee the default on all production instances. Pasquale Pagano
07:17 PM VM Creation #8990: new instance of FusionRegistry in production
smartgears is not running on tabulardata-d4s.d4science.org, btw. Do we need it?
Andrea Dell'Amico
07:17 PM VM Creation #8990 (In Progress): new instance of FusionRegistry in production
Andrea Dell'Amico
02:22 PM VM Creation #8990: new instance of FusionRegistry in production
Dear Andrea,
actually I don't know if the original target of that VM was only dev environment. However it is current...
Ciro Formisano
02:12 PM VM Creation #8990: new instance of FusionRegistry in production
OK. I didn't know that the actual VM was a development one, so it's not properly named. The new one will be fusionreg... Andrea Dell'Amico
11:34 AM VM Creation #8990: new instance of FusionRegistry in production
Dear Lino,
actually I did not find any hardware requirement in official documentation. About software Tomcat is need...
Ciro Formisano
07:02 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
I just gave staging.datasciencepro.eu the same accesses that dev.datasciencepro.eu has.
Andrea Dell'Amico
03:29 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Boro Jakimovski wrote:
> Do we need to setup the same for the
> staging.datasciencepro.eu (at least the db access)...
Massimiliano Assante
03:24 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
The problem is not on our side:
~~~
# iptables -nvL | grep 194.149.136.225
0 0 ACCEPT tcp -- * ...
Andrea Dell'Amico
03:03 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
@andrea.dellamico@isti.cnr.it it seems that the elastic search node (elastic0-d-d4s.d4science.org) is not contactable... Massimiliano Assante
05:42 PM Support #9014: EcoEvo VRE modifications
I have asked about point two. I will let you know as soon as possible Miriam Baglioni
03:30 PM Support #9014: EcoEvo VRE modifications

> 1. Change the start of the Welcome message text to:
> ' It provides a list of best online places (sources) that...
Francesco Mangiacrapa
02:44 PM Support #9014 (Closed): EcoEvo VRE modifications
Is it possible to apply the following modification to the EcoEvo VRE?
1. Change the start of the Welcome message t...
Miriam Baglioni
04:01 PM Task #9017 (Rejected): New MongoDB Cluster for preprod
We need a MongoDB Cluster for preproduction as soon as possible. The cluster should not be very powerful and performa... Massimiliano Assante
03:57 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Is the ParthenosVO ready? @roberto.cirillo@isti.cnr.it we're late Massimiliano Assante
03:56 PM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
migration test has restarted at 15:50 23/06/17 Costantino Perciante
12:46 PM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
due to changes in a related task Andrea Dell'Amico
03:40 PM Task #8040 (Paused): Impossible to produce DWCA for a number of Families
Valentina Marioli
03:18 PM VRE #9013 (Released): devEDISON VRE for EDISON Project Developments on Preproduction
Massimiliano Assante
03:18 PM VRE #9013 (Available): devEDISON VRE for EDISON Project Developments on Preproduction
Massimiliano Assante
02:26 PM VRE #9013 (In Progress): devEDISON VRE for EDISON Project Developments on Preproduction
Massimiliano Assante
02:17 PM VRE #9013 (Planned): devEDISON VRE for EDISON Project Developments on Preproduction
Massimiliano Assante
02:17 PM VRE #9013 (Released): devEDISON VRE for EDISON Project Developments on Preproduction
devEDISON VRE is going to be used by the EDISON Project on their portal instance at http://dev.datasciencepro.eu Massimiliano Assante
03:17 PM Task #8891: Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
and I added @pierpaolo.petriccione@eng.it and @boro.jakimovski@finki.ukim.mk ad VRE Managers https://dev.datasciencep... Massimiliano Assante
03:05 PM Task #8891 (Closed): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
I could connect to dev.datasciencepro today and finished the job. I created and set up a development VRE (with gCube... Massimiliano Assante
02:14 PM VRE #8933 (Released): Deploy preECO VRE for BlueEconomy Developments
The VRE is ready Massimiliano Assante
01:56 PM VM Creation #9003 (Feedback): Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
The provisioning is complete.
workspace-repository-prod1.d4science.org still has a local postgresql instance, while ...
Andrea Dell'Amico
01:29 PM VM Creation #9003: Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
Provisioning is running on both servers.
Andrea Dell'Amico
12:36 PM VM Creation #9003: Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
authorizeChildrenContext: true
Andrea Dell'Amico
11:47 AM VM Creation #9003 (In Progress): Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
On workspace-repository-prod.d4science.org I see:
~~~
/dev/xvda3 40G 33M 40G 1% /home/gcube/tomcat/te...
Andrea Dell'Amico
01:17 PM Task #9010 (Closed): ansible role that installs the home library webapp
Fixed the already existing one to use maven_artifact.
Andrea Dell'Amico
12:47 PM Task #9010 (In Progress): ansible role that installs the home library webapp
nexus coordinates: http://maven.research-infrastructures.eu/nexus/content/repositories/gcube-staging/org/gcube/data/a... Andrea Dell'Amico
12:46 PM Task #9010 (Closed): ansible role that installs the home library webapp
We need to automate the home library installation. Andrea Dell'Amico
01:15 PM Incident #9008: algorithmsBot/runAlgorithmsBot.sh going berserk
The problem seems really caused by that algorithm execution, actually (parallelized_STEP1_VPA_ICCAT_BF, or the one th... Andrea Dell'Amico
12:35 PM Incident #9008: algorithmsBot/runAlgorithmsBot.sh going berserk
Hi Andrea, the bot is "mine". It helps us to produce SAI installation strings. Indeed it does something very simple: ... Gianpaolo Coro
10:42 AM Incident #9008 (Closed): algorithmsBot/runAlgorithmsBot.sh going berserk
The `algorithmsBot/runAlgorithmsBot.sh` script generated hundreds of thousands exceptions in the workspace app. The e... Andrea Dell'Amico

Jun 22, 2017

07:19 PM VM Creation #9003: Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
A reminder: it's important that we switch to https as the only point of access, and close the 8080 from the outside.
Andrea Dell'Amico
06:42 PM VM Creation #9003 (Closed): Provisioning for workspace-repository-prod1.d4science.org and workspace-repository-prod.d4science.org
Both machines need the homelibrary webapp with smartgears. workspace-repository-prod1 needs a local postgres, whereas... Costantino Perciante
06:46 PM VM Creation #8990: new instance of FusionRegistry in production
Please @ciro.formisano@eng.it revise the information that are required to create the VM. I put indicative information... Pasquale Pagano
06:23 PM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
Just to be sure that everything is provisioned, both machines workspace-repository-prod1.d4science.org and workspace-... Costantino Perciante
05:41 PM Incident #8986: Smaph app: error from remote werver
Can you try again now? Marco Cornolti
05:30 PM Incident #8986: Smaph app: error from remote werver
The problem is still there. Roberto Cirillo
05:18 PM Task #8992: OrientDB does not restart when the certificate is renewed
OK, I've just found that the original startup scripts run both the start and the stop commands as background jobs.
I...
Andrea Dell'Amico
04:59 PM Task #8992: OrientDB does not restart when the certificate is renewed
After 60 days from yesterday night.
Andrea Dell'Amico
04:53 PM Task #8992: OrientDB does not restart when the certificate is renewed
Do you know the next time the certificate will be renewed? Luca Frosini
04:31 PM Task #8992 (Feedback): OrientDB does not restart when the certificate is renewed
I added a sleep between the stop and start commands that are run after a certificate has been renewed.
My guess is t...
Andrea Dell'Amico
04:20 PM Task #8992 (In Progress): OrientDB does not restart when the certificate is renewed
Andrea Dell'Amico
10:49 AM Task #8992 (Closed): OrientDB does not restart when the certificate is renewed
Luca Frosini
01:58 PM Task #8934 (Closed): Enable Data Miner service in the (preproduction) preECO VRE
I have added both the algorithms that are actually needed in this VRE, I am going to close the ticket. If any other a... Paolo Scarponi
12:19 PM Task #8978 (Closed): Enable DBEndpoint service in the (preproduction) preECO VRE
Hey @roberto.cirillo@isti.cnr.it. Regarding this ticket, I asked to add preECO to an existing database endpoint and t... Denis Pyriochos
10:18 AM Task #8978 (Feedback): Enable DBEndpoint service in the (preproduction) preECO VRE
Roberto Cirillo
10:17 AM Task #8978: Enable DBEndpoint service in the (preproduction) preECO VRE
@denispyr@i2s.gr please, could you add your error log or some exception when you open a ticket, if it's possible? Wit... Roberto Cirillo
11:16 AM Task #8982 (Closed): Enable Service Endpoint in the (preproduction) preECO VRE
Denis Pyriochos
11:13 AM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
Nice. That I thought too. So maybe is good in such cases the services to be added both in preproduction and developme... Kostas Kakaletris
10:34 AM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
Kostas Kakaletris wrote:
> * @roberto.cirillo@isti.cnr.it , by the way, would it be OK if the same resource was be...
Roberto Cirillo

Jun 21, 2017

05:51 PM VM Creation #8990 (Closed): new instance of FusionRegistry in production
Dear Infra Manager,
as agreed at the TCOM, we need to bring in production the new version of Fusion Registry (8.x) c...
Ciro Formisano
04:40 PM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
@denispyr@i2s.gr I do not think that the current preproduction resource (dl20) should be added to that new preproduct... Kostas Kakaletris
03:11 PM Task #8982 (Feedback): Enable Service Endpoint in the (preproduction) preECO VRE
Denis Pyriochos wrote:
> This resource is available to preVRE and Dorne. Please make it available to preECO, as well...
Roberto Cirillo
02:06 PM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
here Kostas: https://pre.d4science.org/group/preeco/node-token-generator Massimiliano Assante
02:00 PM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
* @roberto.cirillo@isti.cnr.it can you please give me access to token generator on preECO vre in order to be able to... Kostas Kakaletris
12:22 PM Task #8982 (In Progress): Enable Service Endpoint in the (preproduction) preECO VRE
Denis Pyriochos
12:12 PM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
This resource is available to preVRE and Dorne. Please make it available to preECO, as well. There is no need to chan... Denis Pyriochos
10:19 AM Task #8982 (Feedback): Enable Service Endpoint in the (preproduction) preECO VRE
I had already added the serviceEndpoint named SimulFishGrowth also present in the preVRE VRE.
This is the only servi...
Roberto Cirillo
10:18 AM Task #8982 (In Progress): Enable Service Endpoint in the (preproduction) preECO VRE
Roberto Cirillo
04:27 PM Task #8881 (Feedback): DataMiner - Install FP-growth on DataMiner services
Done. Can you check if it works? The executable is `fpgrowth` Andrea Dell'Amico
04:12 PM Task #8881 (In Progress): DataMiner - Install FP-growth on DataMiner services
Andrea Dell'Amico
03:00 PM Task #8934 (Feedback): Enable Data Miner service in the (preproduction) preECO VRE
Paolo Scarponi wrote:
> I have aligned the pre-prod dataminer to the cluster behind the BiodiversityLab VRE, which i...
Roberto Cirillo
02:52 PM Task #6308: Migrate production infrastructure nodes to Java 8
Some machines around are still running java 7. I see tagme.d4science.org, sharelatex.d4science.org, the CNR hosted rs... Andrea Dell'Amico
11:21 AM Task #6308: Migrate production infrastructure nodes to Java 8
from the information I have, all the "migrable" nodes have been migrated. The remaining nodes are the ones running gC... Gabriele Giammatteo
02:05 PM Incident #8986: Smaph app: error from remote werver
Should be working again now. @roberto.cirillo@isti.cnr.it can you please re-run the unit tests and close this issue i... Marco Cornolti
10:14 AM Incident #8986: Smaph app: error from remote werver
There is a bad hardware problem on a server running a service SMAPH depends upon. This may take a while. Marco Cornolti
09:52 AM Incident #8986: Smaph app: error from remote werver
Hi, I can confirm the issue. I'm on it. Marco Cornolti
09:38 AM Incident #8986 (Closed): Smaph app: error from remote werver
I see the following exception in catalina.out when a query is performed. The problem is due to remote server Exceptio... Roberto Cirillo
11:08 AM Task #8987 (Closed): new user accounts on Gitorious
We would need some user accounts to be created on Gitorious to let ENG team to start the migration of some components... Gabriele Giammatteo

Jun 20, 2017

06:08 PM Task #8978 (In Progress): Enable DBEndpoint service in the (preproduction) preECO VRE
Pasquale Pagano
06:06 PM Task #8934: Enable Data Miner service in the (preproduction) preECO VRE
@scarponi@isti.cnr.it, PreEco was born to serve the needs of the BlueEconomy cluster and the algorithms identified by... Pasquale Pagano
03:53 PM Task #8934: Enable Data Miner service in the (preproduction) preECO VRE
I have aligned the pre-prod dataminer to the cluster behind the BiodiversityLab VRE, which is the environment equippe... Paolo Scarponi
12:32 PM Task #8982: Enable Service Endpoint in the (preproduction) preECO VRE
Roberto, it seems the endpoint we added yesterday for the db is not e enough https://support.d4science.org/issues/5393 Massimiliano Assante
11:36 AM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Do we need to setup the same for the
staging.datasciencepro.eu (at least the db access)
and
www.datasciencep...
Boro Jakimovski
10:46 AM Task #8979 (Closed): Nagios: switch check from collector-d4research:8000 to resourcemanager-d4research.d4science.org
test moved from
collector-d4research:8000
to
resourcemanager-d4research.d4science.org:8080
Tommaso Piccioli

Jun 19, 2017

09:15 PM Task #8978: Enable DBEndpoint service in the (preproduction) preECO VRE
@roberto.cirillo@isti.cnr.it Sorry, I misread the error message. The DB endpoint should be named SimulFishGrowth (no... Denis Pyriochos
06:05 PM Task #8978 (Closed): Enable DBEndpoint service in the (preproduction) preECO VRE
Roberto Cirillo
05:57 PM Task #8978 (In Progress): Enable DBEndpoint service in the (preproduction) preECO VRE
Massimiliano Assante
05:53 PM Task #8978 (Closed): Enable DBEndpoint service in the (preproduction) preECO VRE
Wanted DB Endpoint named SimulFishGrowthData, as the one available at preVRE and NextNext Denis Pyriochos
07:52 PM Task #8982 (Closed): Enable Service Endpoint in the (preproduction) preECO VRE
preECO VRE needs a service endpoint named SimulFishGrowthData, pointing to the RESTful servlet (see #5393) Denis Pyriochos
06:23 PM Task #8934: Enable Data Miner service in the (preproduction) preECO VRE
I've added the dataminer instance and all the required resources to the new VRE.
I've also added the SIMULFISHKPIS ...
Roberto Cirillo
05:44 PM Task #8934 (In Progress): Enable Data Miner service in the (preproduction) preECO VRE
Roberto Cirillo
06:02 PM Task #8979 (Closed): Nagios: switch check from collector-d4research:8000 to resourcemanager-d4research.d4science.org
The resource manager instance of D4Research VO has been transferred from collector-d4research.d4science.org:8000 to r... Roberto Cirillo
05:58 PM Task #8875 (Feedback): Enable VPN for external gCube Liferay Portal instance (EDISON)
Andrea Dell'Amico
05:57 PM Task #8875 (In Progress): Enable VPN for external gCube Liferay Portal instance (EDISON)
All the required services are now accessible by `dev.datasciencepro.eu`
Andrea Dell'Amico
05:26 PM VM Creation #8779 (Closed): Create new VM for ResourceManager on D4Research
The ResourceManager service is running now on the new node.
I've stopped the old resource-manager instance running ...
Roberto Cirillo
05:16 PM Task #6308 (In Progress): Migrate production infrastructure nodes to Java 8
Should we consider this completed? Massimiliano Assante
05:13 PM VRE #8933 (Available): Deploy preECO VRE for BlueEconomy Developments
Accessible on the preproduction portal https://pre.d4science.org/group/preeco
Massimiliano Assante
05:00 PM Task #8892 (Closed): Authorize dev.datasciencepro.eu (194.149.136.225) on /gcube
thanks Massimiliano Assante
03:31 PM Task #8892 (Feedback): Authorize dev.datasciencepro.eu (194.149.136.225) on /gcube
Lucio Lelii
02:55 PM Task #8892 (In Progress): Authorize dev.datasciencepro.eu (194.149.136.225) on /gcube
Massimiliano Assante
04:59 PM Task #8891: Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
@boro.jakimovski@finki.ukim.mk I did work today via ssh on the edison dev portal, i could also startup it (via start... Massimiliano Assante
04:26 PM Task #8965 (Closed): Install Knime on dev DataMiner machines
Installed. The executables are `knime` and `knime-full` respectively.
I'm hosting the distribution archives on ftp.d...
Andrea Dell'Amico
02:48 PM Task #8965 (In Progress): Install Knime on dev DataMiner machines
Andrea Dell'Amico
03:45 PM Task #8969 (Closed): mscorlib.dll missing in Mono installation
I've added the two needed packages:
~~~
libmono-2.0-1
libmono-corlib2.0-cil
~~~
to RPackagesManagement/test_...
Andrea Dell'Amico
03:39 PM Task #8969: mscorlib.dll missing in Mono installation
Now the process works. Indeed, it is a process that should be already running on the DMs. Thus, the installation shou... Gianpaolo Coro
02:44 PM Task #8969 (In Progress): mscorlib.dll missing in Mono installation
Done. It's the same on all the dataminer. If you want those packages on the production servers, they must be installe... Andrea Dell'Amico
02:51 PM Incident #8967 (Closed): AGINFRA+: forbidden message for a VRE user in accessing a file from a notification email
The issue was fixed Friday, tried to reproduce the issue without luck. Massimiliano Assante
02:39 PM Incident #8967 (In Progress): AGINFRA+: forbidden message for a VRE user in accessing a file from a notification email
Massimiliano Assante
10:12 AM Task #8953 (Closed): Update Jdk on all dataminer instances
Roberto Cirillo
10:09 AM Upgrade #8648 (Planned): D4Science Infrastructure Upgrade to gCube 4.5
Roberto Cirillo

Jun 16, 2017

03:57 PM Task #8953 (In Progress): Update Jdk on all dataminer instances
Roberto Cirillo
11:36 AM Incident #8967 (Feedback): AGINFRA+: forbidden message for a VRE user in accessing a file from a notification email
The user can now access the resource. Valentina Marioli
11:20 AM Incident #8967 (In Progress): AGINFRA+: forbidden message for a VRE user in accessing a file from a notification email
Valentina Marioli
11:00 AM Task #8969 (Closed): mscorlib.dll missing in Mono installation
On the dataminer1-d and dataminer2-d we need the mono installation to be "checked" or completed. We have the followin... Gianpaolo Coro

Jun 15, 2017

07:32 PM Support #8961 (Closed): Edit rights to developer in geoanalytics-environmental-data-provider configuration
done Gabriele Giammatteo
11:46 AM Support #8961 (Closed): Edit rights to developer in geoanalytics-environmental-data-provider configuration
Hi Gabrielle,
Can you please give edit rights to Konstantinos Giannakelos in org.gcube.geoanalytics.geoanalytics-e...
Dimitris Katris
06:34 PM Incident #8967 (Closed): AGINFRA+: forbidden message for a VRE user in accessing a file from a notification email
@aballis@di.uoa.gr is reporting an issue in accessing a file directly from an email notification (he is a member of t... Leonardo Candela
05:30 PM Incident #8963 (Closed): AGINFRA+ workspace: issues in uploading a file
I confirm both Gergely and I managed to upload files.
I'm wondering why the issue related with the lack of an adm...
Leonardo Candela
04:28 PM Incident #8963 (Feedback): AGINFRA+ workspace: issues in uploading a file
The admin of the VRE folder "AGINFRAplus" was not set, what's why you could not upload files.
I've tried to upload ...
Valentina Marioli
04:03 PM Incident #8963 (In Progress): AGINFRA+ workspace: issues in uploading a file
Valentina Marioli
03:18 PM Incident #8963 (Closed): AGINFRA+ workspace: issues in uploading a file
@gergely.sipos@egi.eu just informed me he is experiencing issues in uploading a file in a workspace folder he just cr... Leonardo Candela
04:24 PM Task #8965 (Closed): Install Knime on dev DataMiner machines
Knime and knime-full installation is required on the following machines:
dataminer1-d-d4s dataminer2-d-d4s
Gianpaolo Coro
02:47 PM VM Creation #8551 (Paused): Please Create a VM to install Resource Registry for PARTHENOS
I can successfully login via ssh. Luca Frosini
02:42 PM VM Creation #8551 (In Progress): Please Create a VM to install Resource Registry for PARTHENOS
You are right infact correctly Ticket #8511 blocks this ticket which is blocked by #8591. Luca Frosini
02:47 PM VM Creation #8552: Please Create a VM to install an OrientDB instance for PARTHENOS
I can successfully login via ssh Luca Frosini
02:44 PM VM Creation #8552 (Closed): Please Create a VM to install an OrientDB instance for PARTHENOS
Luca Frosini
12:36 PM Incident #8903 (In Progress): Cannot move shared folder into private folder
Valentina Marioli
12:34 PM Task #8962 (Closed): dataminer@cnr instances: enable authorizeChild option on every scope
In order to decrease the number of calls to Registry services, it's needed to enable the authorizeChild option on eac... Roberto Cirillo
11:46 AM VM Creation #8960 (Closed): Provide new VM collector-parthenosvo.d4science.org
The new VM should host the gCore Collector service and the ResourceManager gCore service for ParthenosVO Virtual Orga... Roberto Cirillo
11:36 AM VM Creation #8959 (Closed): Provide new VM registry-parthenosvo.d4science.org
The new VM should host the registry and Notifier gCore services for ParthenosVO Virtual Organization.
It's needed ...
Roberto Cirillo
11:30 AM Task #8687 (Rejected): Move collector-edison.d4science.org to collector-parthenosvo.d4science.org
Roberto Cirillo
11:22 AM Task #8687 (In Progress): Move collector-edison.d4science.org to collector-parthenosvo.d4science.org
Roberto Cirillo
11:30 AM Task #8688 (Rejected): Move registry-edison.d4science.org to registry-parthenosvo.d4science.org
Roberto Cirillo
11:29 AM Task #8689 (Rejected): [VREModeler] Remove edisonVO from node44.p.d4science.research-infrastructures.eu
Roberto Cirillo

Jun 14, 2017

07:04 PM Task #8953 (Closed): Update Jdk on all dataminer instances
It's needed to update the jdk to java8 on all dataminer instances:
In particular we need to update the following c...
Roberto Cirillo
07:01 PM VM Creation #8551 (Feedback): Please Create a VM to install Resource Registry for PARTHENOS
Resource registry installed. But it seems that `/d4science.research-infrastructures.eu/Parthenos` does not exist.
Andrea Dell'Amico
01:19 PM VM Creation #8551 (In Progress): Please Create a VM to install Resource Registry for PARTHENOS
registry-parthenos.d4science.org is up, to be provisioned. Tommaso Piccioli
06:59 PM Incident #8949 (Closed): Java version mismatching causes SAI failure
I've update the jdk to jdk8 in the prototypes and genericworkers-proto clusters. I've also restored dataminer1-pre in... Roberto Cirillo
06:38 PM Incident #8949: Java version mismatching causes SAI failure
The tests worked fine. Gianpaolo Coro
06:08 PM Incident #8949: Java version mismatching causes SAI failure
dataminer1-pre is running now on RPrototypingLab Roberto Cirillo
05:58 PM Incident #8949: Java version mismatching causes SAI failure
I tested dataminer1-pre with java 8 and SAI with java 8. In pre-production the basic tests have been successful. To v... Giancarlo Panichi
04:53 PM Incident #8949: Java version mismatching causes SAI failure
Well, I was asked about dataminer1-pre, but from the other ticket I see that the test were made on dataminer[1:2]-d-d... Andrea Dell'Amico
04:47 PM Incident #8949: Java version mismatching causes SAI failure
I would avoid to double the work, if Giancarlo is working on the SAI compiling Java7 re-deplying the portlet isn't a ... Massimiliano Assante
04:41 PM Incident #8949: Java version mismatching causes SAI failure
That ticket reports my tests towards a Dataminer that was DECLARED to be java 8 but indeed I have later discovered it... Gianpaolo Coro
04:35 PM Incident #8949: Java version mismatching causes SAI failure
From this ticket #8424 seems all works well with Java8. So, I think we should upgrade the jdk on preproduction datami... Roberto Cirillo
04:34 PM Incident #8949: Java version mismatching causes SAI failure
We can ask for a new publication. Gianpaolo Coro
04:21 PM Incident #8949: Java version mismatching causes SAI failure
Giancarlo Panichi wrote:
> Meanwhile, I am creating a version of SAI that compiles in Java 7 to solve the problem
...
Massimiliano Assante
04:16 PM Incident #8949: Java version mismatching causes SAI failure
Meanwhile, I am creating a version of SAI that compiles in Java 7 to solve the problem if it is not possible to switc... Giancarlo Panichi
03:57 PM Incident #8949 (In Progress): Java version mismatching causes SAI failure
The SAI Testing plan does not cover the actual publication part of the SAI Algorithm produced, if it did then we woul... Massimiliano Assante
03:42 PM Incident #8949: Java version mismatching causes SAI failure
Please is it possible to put a dataminer in production with Java 8 on RPrototypingLab, so let's take a look and I see... Giancarlo Panichi
03:37 PM Incident #8949: Java version mismatching causes SAI failure
@g.panichi@isti.cnr.it is one or more steps of the testing plan of SAI covering the test regarding this issue? Massimiliano Assante
02:13 PM Incident #8949: Java version mismatching causes SAI failure
dataminer1-pre.d4science.org is running java 7, java 8 is not installed.
Andrea Dell'Amico
01:49 PM Incident #8949: Java version mismatching causes SAI failure
org.gcube.portlets.user.statistical-algorithms-importer.1-6-0 (common apps) was tested by @etheodorako@di.uoa.gr on J... Massimiliano Assante
01:19 PM Incident #8949: Java version mismatching causes SAI failure
The alternative is switch to java8 on all the dataminers.
Andrea Dell'Amico
01:18 PM Incident #8949: Java version mismatching causes SAI failure
java 7 is still available on the portals VMs. It lives into `/usr/lib/jvm/java-7-oracle` (that's JAVA_HOME). The bina... Andrea Dell'Amico
12:35 PM Incident #8949 (Closed): Java version mismatching causes SAI failure
The Portals have been passed to Java 8 but the DataMiners have not (although I was suppose to have tested this in #84... Gianpaolo Coro
06:25 PM VM Creation #8552 (Feedback): Please Create a VM to install an OrientDB instance for PARTHENOS
Andrea Dell'Amico
01:20 PM VM Creation #8552 (In Progress): Please Create a VM to install an OrientDB instance for PARTHENOS
orientdb-parthenos.d4science.org is up, to be provisioned. Tommaso Piccioli
05:50 PM VM Creation #8716 (Feedback): GeoServer dedicated VM for protectedareaimpactmaps
The server is running. No http -> https redirection.
The ssl certificate will be emitted in the next days.
Andrea Dell'Amico
05:37 PM VM Creation #8716: GeoServer dedicated VM for protectedareaimpactmaps
postgresql server: postgresql-srv.d4science.org
db name: geoserver_paim
db user: geoserver_paim_u
Andrea Dell'Amico
05:08 PM VM Creation #8716: GeoServer dedicated VM for protectedareaimpactmaps
A dedicated db would be better in this case. Fabio Sinibaldi
05:01 PM VM Creation #8716: GeoServer dedicated VM for protectedareaimpactmaps
A question. Is a new postgresql database needed or the app will connect to an existing one?
Andrea Dell'Amico
01:21 PM VM Creation #8716 (In Progress): GeoServer dedicated VM for protectedareaimpactmaps
geoserver-protectedareaimpactmaps.d4science.org is up, to be provisioned. Tommaso Piccioli
11:58 AM VM Creation #8716: GeoServer dedicated VM for protectedareaimpactmaps
Generally speaking, for these VRE-dedicated instances, I think we could use a defaut convention like geoserver-[VRE_N... Fabio Sinibaldi
11:49 AM VM Creation #8716: GeoServer dedicated VM for protectedareaimpactmaps
Can you suggest a hostname?
Andrea Dell'Amico
05:43 PM Support #8901 (Closed): Run a script removing white spaces at the end of folder names (if any)
White spaces at the end of folder/file names removed. Valentina Marioli
02:40 PM Support #8901 (In Progress): Run a script removing white spaces at the end of folder names (if any)
Valentina Marioli
05:41 PM Incident #8900 (Closed): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Valentina Marioli
05:41 PM Incident #8900 (In Progress): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Valentina Marioli
05:40 PM Incident #8900 (Closed): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Valentina Marioli
12:19 PM Incident #8900 (Feedback): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Bug fixed. It's now possible to open the folder VRE Folders > BlueBridgeProject > Work Packages > WP5 Blue Assessment... Valentina Marioli
03:49 PM VM Creation #8907 (Feedback): geoserver-aquaculture-pre.d4science.org
The server has been provisioned. I installed geoserver 2.10.3 that should include the fix discussed here: #7538
Andrea Dell'Amico
02:28 PM VM Creation #8907: geoserver-aquaculture-pre.d4science.org
Postgresql data:
server: postgresql-srv-dev.d4science.org
database: geoserveraquapre
user: geoserveraquapre
pwd...
Andrea Dell'Amico
01:21 PM VM Creation #8907 (In Progress): geoserver-aquaculture-pre.d4science.org
geoserver-aquaculture-pre.d4science.org is up, to be provisioned. Tommaso Piccioli
12:30 PM Task #2221 (Closed): Experiment with a new monitoring/metrics tool: influxdata (influxdb)
As the interesting tool are commercial, and prometheus seems a better solution, influx will not be deployed.
Andrea Dell'Amico
12:27 PM VM Creation #8755 (Closed): Please Create VM to install Resource Registry - 2
Andrea Dell'Amico
12:26 PM VM Creation #8753 (Closed): Please Create VM to install Resource Registry - 1
Andrea Dell'Amico
12:26 PM Task #8752 (Closed): HA Proxy Instance for accounting service
Andrea Dell'Amico
12:25 PM Task #8751 (Closed): HA Proxy Instance for resource registry service
Andrea Dell'Amico
12:23 PM Task #8613 (Closed): Porting data-d.d4science.org and its applications to JAVA 8
Andrea Dell'Amico
12:23 PM Task #8735 (Closed): create a new database in the postgresql dev cluster
Andrea Dell'Amico
12:21 PM VM Creation #7702 (Closed): Provide new VM for hosting tabulardata service in devsec VO
Fixed days ago Andrea Dell'Amico
12:09 PM Incident #8942 (Closed): Check Mono installation
Gianpaolo Coro
11:31 AM Incident #8942: Check Mono installation
minGW is a gcc-derived C/C++ compiler. The result binaries are pure MS Windows executables, while mono is a .Net/C# r... Andrea Dell'Amico
11:19 AM Incident #8942: Check Mono installation
I have compiled them with minGW on a Windows machine, perhaps either this is not supported by Mono or some package is... Gianpaolo Coro
10:50 AM Incident #8942 (Feedback): Check Mono installation
Andrea Dell'Amico
10:50 AM Incident #8942 (In Progress): Check Mono installation
dataminers have mono 4.0 installed as requirement for another package.
I just installed the mono 2.0 libraries on da...
Andrea Dell'Amico
10:09 AM Incident #8942 (Closed): Check Mono installation
On the dataminer0-proto machine, I'm trying to run a simple script through Mono, but I get this error:
The assembl...
Gianpaolo Coro
11:36 AM Task #8645 (Closed): Please provide Access to gCube SVN to CLS
Andrea Dell'Amico
11:01 AM Task #8645: Please provide Access to gCube SVN to CLS
The discussion has confused CLS, and should not occur here they thought SVN access has not been given. But it has rig... Massimiliano Assante
11:22 AM Task #8893 (Closed): Please Install Java 8 Oracle on datasciencepro instances to
Massimiliano Assante
11:22 AM Task #8891 (In Progress): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
Massimiliano Assante

Jun 13, 2017

05:38 PM VRE #8933: Deploy preECO VRE for BlueEconomy Developments
The VRE is available https://pre.d4science.org/group/preeco we're still need to deploy the data miner service and the... Massimiliano Assante
04:55 PM VRE #8933 (Released): Deploy preECO VRE for BlueEconomy Developments
The preECO VRE should be used by BlueEconomy for their developments instead of the gcube development infra Massimiliano Assante
05:13 PM Task #8926 (Closed): Unbound content length for thredds
preconfigured pre and prod so that nginx will permit uploads up to 20GB. I didn't install the change because nginx is... Andrea Dell'Amico
02:22 PM Task #8926: Unbound content length for thredds
We can set it to 20GB, if we need more we can change it again later. It's a 10 seconds operations that does not stop ... Andrea Dell'Amico
01:58 PM Task #8926: Unbound content length for thredds
I agree it's quite drastic. Checking on production instance, the larger files are about 10GB, so maybe we can set... ... Fabio Sinibaldi
12:57 PM Task #8926 (Feedback): Unbound content length for thredds
Andrea Dell'Amico
12:57 PM Task #8926 (In Progress): Unbound content length for thredds
Yes, just done.
I'm not sure that disabling it altogether is the right choice, though
Andrea Dell'Amico
10:53 AM Task #8926 (Closed): Unbound content length for thredds
In order to support http upload of large files, we need to remove the limitation on http content-length introduced by... Fabio Sinibaldi
05:11 PM Task #8935 (Closed): Delete Statistical Service from the VRE Modeler resource in all VOs
The Statistical Service is still a functionality one can select in any environment. But we know it has been dismissed Massimiliano Assante
05:08 PM Task #8932 (Closed): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
The service is ready to use Roberto Cirillo
04:56 PM Task #8932 (In Progress): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Massimiliano Assante
04:48 PM Task #8932: Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Once ready you can check if everything works here: https://pre.d4science.org/group/preprod/vre-deployment Massimiliano Assante
04:43 PM Task #8932 (Closed): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Massimiliano Assante
04:58 PM Task #8934 (Closed): Enable Data Miner service in the (preproduction) preECO VRE
Data Miner service in the preECO VRE should be equipped with I2S only algorithms Massimiliano Assante
10:29 AM Task #8893 (In Progress): Please Install Java 8 Oracle on datasciencepro instances to
Dev, staging and production is upgraded to Oracle java 8. Boro Jakimovski

Jun 12, 2017

05:47 PM Task #8911 (Closed): Deploy SmartExecutor plugins for TwitterMonitor
Here are the links for the SmartExecutor plugins to be deployed for the TwitterMonitor applications.
TwMonCron (ht...
Salvatore Minutoli
05:15 PM Incident #8900 (In Progress): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Valentina Marioli
05:07 PM VM Creation #8755 (Feedback): Please Create VM to install Resource Registry - 2
The service has been provisioned. I see that haproxy passes its check, but I have a doubt about the orientdb user. I ... Andrea Dell'Amico
05:06 PM VM Creation #8753 (Feedback): Please Create VM to install Resource Registry - 1
The service has been provisioned. I see that haproxy passes its check, but I have a doubt about the orientdb user. I ... Andrea Dell'Amico
02:29 PM VM Creation #8907: geoserver-aquaculture-pre.d4science.org
geoserver-aquacultureatlas-pre.d4science.org rather than geoserver-aquaculture-pre.d4science.org Emmanuel Blondel
02:16 PM VM Creation #8907 (Closed): geoserver-aquaculture-pre.d4science.org
Please create said node (aliases can be used). GeoServer with spatialite extensions are needed. Fabio Sinibaldi
02:24 PM Task #8809: Deploy Twitter Monitor Smart Executor Plugin
So, we still have to wait for the plugins download URLs and for the PHP scripts so that we can provision them as well.
Andrea Dell'Amico

Jun 11, 2017

10:46 PM Incident #8903 (Closed): Cannot move shared folder into private folder
I hava a shared folder named MSC, Anton is the admin. I created a private folder (MSC Related) but when I try to move... Massimiliano Assante

Jun 10, 2017

10:45 AM Support #8901 (Closed): Run a script removing white spaces at the end of folder names (if any)
We had 2 incidents for the same reason in two days. The last one is related to a folder (name) 1 year old ,and from t... Massimiliano Assante
10:38 AM Incident #8900 (Closed): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
If i try to access via Workspace his folder:
VRE Folders > BlueBridgeProject > Work Packages > WP5 Blue Assessmen...
Massimiliano Assante

Jun 09, 2017

07:46 PM Incident #8883 (Closed): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
Installed on the preprod and production servers too.
The new temporary directory is /tmp/nginx_temp, and a two level...
Andrea Dell'Amico
07:21 PM Incident #8883: Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
The new configuration is running on both dev2 and dev3. Can anybody test?
Andrea Dell'Amico
07:11 PM Incident #8883 (In Progress): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
I'm adding the config option `client_body_temp_path` http://nginx.org/en/docs/http/ngx_http_core_module.html#client_b... Andrea Dell'Amico
06:09 PM Incident #8898 (Closed): Issue overwriting a file
Valentina Marioli
06:06 PM Incident #8898 (Resolved): Issue overwriting a file
The issue has been fixed. Valentina Marioli
05:08 PM Incident #8898 (In Progress): Issue overwriting a file
Valentina Marioli
05:08 PM Incident #8898 (Closed): Issue overwriting a file
Overwriting a file, its public link changes. Valentina Marioli
05:57 PM Task #8696 (Rejected): Upgrade ubuntu version on dataminer[1-2]-d-d4s.d4science.org
This activity has been performed here: #8895 Roberto Cirillo
05:35 PM Incident #8886 (Closed): Private folder (not mine) in my workspace
The owner of myscripts folder has been changed to "massimiliano.assante". Valentina Marioli
11:06 AM Incident #8886 (In Progress): Private folder (not mine) in my workspace
Valentina Marioli
09:42 AM Incident #8886 (Closed): Private folder (not mine) in my workspace
I have a myscripts folder who's owner is an ICES instructor in my private workspace, not sure how but i remember I co... Massimiliano Assante
05:08 PM Task #8895 (Closed): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
OK Andrea Dell'Amico
05:00 PM Task #8895: Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
this is a known problem. The wps carries a xerces version that is not compatible with the one in the jre. For now I h... Lucio Lelii
04:22 PM Task #8895 (Feedback): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
Configured to run on the scopes
~~~
/gcube/devNext/NextNext, /gcube/devNext, /gcube/devsec, /gcube/devsec/devVre
...
Andrea Dell'Amico
03:54 PM Task #8895 (In Progress): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
@tommaso.piccioli@isti.cnr.it rebuilt the VMs.
The provisioning is running.
Andrea Dell'Amico
03:52 PM Task #8895 (Closed): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
And the dev version of dataminer, with the separate algorithms repository.
Andrea Dell'Amico
04:37 PM Task #8897: Install and configure 5 new Rstudio instances at GARR
The new instances are:
ip-90-147-166-61.ct1.garrservices.it
ip-90-147-166-170.ct1.garrservices.it
ip-90-147-166-...
Andrea Dell'Amico
04:36 PM Task #8897 (Closed): Install and configure 5 new Rstudio instances at GARR
Done.
Andrea Dell'Amico
04:24 PM Task #8897 (In Progress): Install and configure 5 new Rstudio instances at GARR
The provisioning is running.
Andrea Dell'Amico
04:23 PM Task #8897 (Closed): Install and configure 5 new Rstudio instances at GARR
With the same configuration of the running ones.
Andrea Dell'Amico
03:50 PM Task #8363 (Closed): We need a new dataminer distribution to build the EGI image
Andrea Dell'Amico
03:48 PM Task #8564 (Closed): Move tabulardata databases hosted on node7.d to postgresql-srv-dev
database migrated, the old VM has been stopped by @tommaso.piccioli@isti.cnr.it Andrea Dell'Amico
03:14 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Massimiliano Assante wrote:
> Andrea, they are going to need to contact also D4Science clusters such as Cassandra an...
Andrea Dell'Amico
03:04 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Andrea, they are going to need to contact also D4Science clusters such as Cassandra and MongoDB and jackrabbit reposi... Massimiliano Assante
02:57 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
A VPN is overkill for this kind of activity. As soon as we have the IP addresses that need access, I'll grant access ... Andrea Dell'Amico
03:00 PM Task #8891 (Paused): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
Paused until Task #8893: Please Install Java 8 Oracle on datasciencepro instances Massimiliano Assante
02:41 PM Task #8891 (Closed): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
The dev.datasciencepro.eu is the portal EDISON Project is going to use for development of their applications.
It s...
Massimiliano Assante
02:59 PM Task #8893 (Closed): Please Install Java 8 Oracle on datasciencepro instances to
Dear Boro,
sorry to inform you we migrated to Java 8 Oracle just yesterday (on production). So any datasciencepro i...
Massimiliano Assante
02:48 PM Task #8877 (Closed): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Andrea Dell'Amico
02:45 PM Task #8892 (Closed): Authorize dev.datasciencepro.eu (194.149.136.225) on /gcube
dev.datasciencepro.eu (194.149.136.225) is an external node part of the EGI Federation Massimiliano Assante
12:21 PM Task #8849 (Closed): Please produce release notes for gCube 4.5.0
Nikolas Laskaris
12:20 PM Task #8849: Please produce release notes for gCube 4.5.0
Please, find the news for gCube 4.5.0 release on the following link
https://goo.gl/Bd17Kx
in markdown format, as us...
Nikolas Laskaris
11:43 AM Task #8849 (In Progress): Please produce release notes for gCube 4.5.0
Nikolas Laskaris
11:57 AM Incident #8887 (Closed): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
Problem is fixed renaming the folder however we are opening an enhancement because the folder names should be trimmed... Massimiliano Assante
11:19 AM Incident #8887 (In Progress): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
the problem may be related to the fact that the folder name ends with a white space "Aqua-alert " Massimiliano Assante
11:15 AM Incident #8887 (Closed): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
If i try to access via Workspace his folder:
Workspace > VRE Folders > Blue-Datathon > Datasets
i get Sorry, a...
Massimiliano Assante
10:34 AM Incident #8882 (Closed): social networking service: messages methods do not work after 4.5 upgrade
Problem solved. A wrong version was deployed in prod Costantino Perciante

Jun 08, 2017

07:56 PM Upgrade #8870 (Completed): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8870 (In Progress): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8869 (Completed): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8869 (In Progress): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
07:54 PM Upgrade #8868 (In Progress): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
07:53 PM Upgrade #8867 (Completed): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
07:52 PM Upgrade #8867 (In Progress): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
07:51 PM Upgrade #8866 (Completed): Edison VO upgrade to gCube 4.5
Roberto Cirillo
07:50 PM Upgrade #8866 (In Progress): Edison VO upgrade to gCube 4.5
Roberto Cirillo
07:48 PM Upgrade #8863 (Completed): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
07:47 PM Upgrade #8865 (Completed): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
07:45 PM Upgrade #8865 (In Progress): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
07:44 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
I've download the latest available build from etics http://eticsbuild2.research-infrastructures.eu/BuildReport/bdownl... Costantino Perciante
07:23 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
Messages is now working fine, not sure what was before but we didn't touch anything Massimiliano Assante
06:49 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
Also, it seems that Messages cannot be send from the Messages portlet, it looks like more a HL or JackRabbit repo issue Massimiliano Assante
06:34 PM Incident #8882 (Closed): social networking service: messages methods do not work after 4.5 upgrade
log reports
~~~
18:18:11.665 [catalina-exec-3] INFO RequestAccounting: REQUEST START ON SocialNetworking:Portal(...
Costantino Perciante
06:35 PM Incident #8883 (Closed): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
It seems We just had a problem with the editing made by @tommaso.piccioli@isti.cnr.it to make nginx support large fi... Massimiliano Assante
06:35 PM Task #8751 (Feedback): HA Proxy Instance for resource registry service
Done. There's no http -> https redirection. Do we need it? Andrea Dell'Amico
03:59 PM Task #8751: HA Proxy Instance for resource registry service
HEAD/GET /resource-registry/access/schema/Facet?polymorphic=false&gcube-token=XXXX
Luca Frosini
01:04 PM Task #8751: HA Proxy Instance for resource registry service
We need a URL that haproxy can check regularly and very frequently (each second or less) to know the status of the se... Andrea Dell'Amico
12:48 PM Task #8751 (In Progress): HA Proxy Instance for resource registry service
The hostname is going to be resource-registry.d4science.org Andrea Dell'Amico
06:34 PM Task #8881: DataMiner - Install FP-growth on DataMiner services
Always assign the tickets to the sysadmins group, please.
Andrea Dell'Amico
06:32 PM Task #8881 (Closed): DataMiner - Install FP-growth on DataMiner services
We need to install FP-growth (Frequent Item Set Mining http://borgelt.net/fpgrowth.html) software on DataMiner servic... Giancarlo Panichi
06:34 PM Task #8752 (Feedback): HA Proxy Instance for accounting service
Luca Frosini wrote:
> I have to change the library to use the HAProxy instead of the Service directly. In the next d...
Andrea Dell'Amico
06:31 PM Task #8752: HA Proxy Instance for accounting service
I have to change the library to use the HAProxy instead of the Service directly. In the next days I'll do it and I'll... Luca Frosini
06:22 PM Task #8752 (In Progress): HA Proxy Instance for accounting service
Done. There's no http -> https redirection. Do we need it?
Andrea Dell'Amico
04:47 PM Task #8752: HA Proxy Instance for accounting service
We usually use a *guest* token for this kind of activities. @lucio.lelii@isti.cnr.it is going to look at it Andrea Dell'Amico
04:46 PM Task #8752: HA Proxy Instance for accounting service
I think that it is the only way to go. We need to register a service endpoint for Nagios. Then we will generate an ap... Pasquale Pagano
04:22 PM Task #8752: HA Proxy Instance for accounting service
@pasquale.pagano@isti.cnr.it what do you think about an application token used by checks Luca Frosini
04:21 PM Task #8752: HA Proxy Instance for accounting service
Regarding the token we can generate an application token to be used in all checks. Luca Frosini
04:20 PM Task #8752: HA Proxy Instance for accounting service
GET/HEAD /accounting-service/gcube/service/status/getStatus?gcube-token=XXXXXX Luca Frosini
01:04 PM Task #8752: HA Proxy Instance for accounting service
We need a URL that haproxy can check regularly and very frequently (each second or less) to know the status of the se... Andrea Dell'Amico
05:57 PM Upgrade #8864 (Completed): FARM VO upgrade to gCube 4.5
Roberto Cirillo
04:17 PM Upgrade #8864 (In Progress): FARM VO upgrade to gCube 4.5
Roberto Cirillo
05:18 PM Upgrade #8650 (Completed): D4Science Gateways upgrade to gCube 4.5
Massimiliano Assante
04:45 PM Upgrade #8650 (In Progress): D4Science Gateways upgrade to gCube 4.5
Massimiliano Assante
04:45 PM Task #8877 (Feedback): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Done. Available over http and https.
Andrea Dell'Amico
04:28 PM Task #8877 (In Progress): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Andrea Dell'Amico
03:55 PM Task #8877: intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
the container must join the following scopes: /gcube, /gcube/devsec, /gcube/devNext with the authorizeChildrenContex... Lucio Lelii
03:53 PM Task #8877 (Closed): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Lucio Lelii
04:40 PM Task #8878 (Closed): Migrate portal cluster nodes to Java 8
Tommaso kindly performed this task Massimiliano Assante
04:24 PM Task #8878 (Closed): Migrate portal cluster nodes to Java 8
infra-gateway and infra-gateway1 .d4science.org should be migrated to Java 8 Massimiliano Assante
04:24 PM Upgrade #8648: D4Science Infrastructure Upgrade to gCube 4.5
due to changes in a related task Massimiliano Assante
03:57 PM Task #8564: Move tabulardata databases hosted on node7.d to postgresql-srv-dev
The tabulardata and tabularmetadata databases have been restored on postgresql-srv-dev.d4science.org.
Andrea Dell'Amico
02:30 PM Task #8875 (Closed): Enable VPN for external gCube Liferay Portal instance (EDISON)
The current VM edison.d4science.org (dev3.d4science.org) hosting one instance of gCube Liferay Portal for the EDISON ... Massimiliano Assante
01:19 PM Incident #8873 (Closed): To many connections from node9-d-d4s to couchbase01.d.d4s
It was due to a temporary test by Luca. Tommaso Piccioli

Jun 07, 2017

07:32 PM Task #8750 (In Progress): Create Accounting Service Cluster
Andrea Dell'Amico
07:31 PM Task #8749 (In Progress): Create Resource Registry Cluster
Andrea Dell'Amico
07:26 PM Task #8752: HA Proxy Instance for accounting service
We're going to use the infra load balancer for this service. It has plenty of resources and it's in HA.
Andrea Dell'Amico
07:26 PM Task #8751: HA Proxy Instance for resource registry service
We're going to use the infra load balancer for this service. It has plenty of resources and it's in HA.
Andrea Dell'Amico
06:29 PM VM Creation #8855 (Feedback): Create a clone of CKAN instance for BB
The VM has been configured. The scopes are:
~~~
/d4science.research-infrastructures.eu/gCubeApps
/d4science.rese...
Andrea Dell'Amico
06:27 PM VM Creation #8854 (Feedback): Create a clone of CKAN instance for SBD
The instance has beed configured.
Note that I added the three scopes that are present on ckan-sobigdata.d4science.or...
Andrea Dell'Amico
06:19 PM Upgrade #8870 (Planned): OpenAIRE VO upgrade to gCube 4.5
Nothing to upgrade Roberto Cirillo
09:36 AM Upgrade #8870 (Completed): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
06:17 PM Upgrade #8869 (Planned): SoBigData VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:35 AM Upgrade #8869 (Completed): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
06:16 PM Upgrade #8867 (Planned): SmartArea VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:34 AM Upgrade #8867 (Completed): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
06:11 PM Upgrade #8866 (Planned): Edison VO upgrade to gCube 4.5
Roberto Cirillo
06:11 PM Upgrade #8866: Edison VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:34 AM Upgrade #8866 (Completed): Edison VO upgrade to gCube 4.5
Roberto Cirillo
06:08 PM Upgrade #8864 (Planned): FARM VO upgrade to gCube 4.5
Roberto Cirillo
10:43 AM Upgrade #8864: FARM VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org
* **(CNR) DONE** smart-grsf-d...
Roberto Cirillo
09:33 AM Upgrade #8864 (Completed): FARM VO upgrade to gCube 4.5
Roberto Cirillo
06:06 PM Upgrade #8868 (Planned): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
12:36 PM Upgrade #8868: D4Research VO upgrade to gCube 4.5
**Hosting Nodes**
*GHN to upgrade*
* resourcemanager-d4research.d4science.org
*WHN to upgrade*
* **(CNR...
Roberto Cirillo
09:35 AM Upgrade #8868 (Completed): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
06:04 PM Upgrade #8865 (Planned): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
12:26 PM Upgrade #8865: gCubeApps VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** accounting-service-1.d4science.org
* **(CNR) DONE** ac...
Roberto Cirillo
09:33 AM Upgrade #8865 (Completed): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
05:53 PM VM Creation #8756 (Closed): Please Create VM to install Accounting Service - 2
Roberto Cirillo
05:52 PM VM Creation #8754 (Closed): Please Create VM to install Accounting Service - 1
Roberto Cirillo
05:51 PM VM Creation #8767 (Closed): Provide a new machine for the catalogue-ws
Roberto Cirillo
05:23 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
I'll work on this task after the upgrade planned for tomorrow. The new VO will be ready in the next week. Wednesday 1... Roberto Cirillo
04:58 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
@roberto.cirillo@isti.cnr.it , can you provide an estimated date for the creation of this VO (which is not going to r... Massimiliano Assante
04:37 PM Upgrade #8863 (In Progress): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
04:37 PM Upgrade #8863 (Planned): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
10:31 AM Upgrade #8863: D4Science Root VO upgrade to gCube 4.5
**HostingNode**
* **(CNR) DONE** data.d4science.org
* **(CNR) DONE** data2-d4s.d4science.org
*WHN to upgrade...
Roberto Cirillo
09:32 AM Upgrade #8863 (Completed): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
04:09 PM Incident #8873 (Closed): To many connections from node9-d-d4s to couchbase01.d.d4s
Every 10 minutes node9-d-d4s.d4science.org tries to open connections to couchbase01-d-d4.d4science.org but there is s... Tommaso Piccioli
02:38 PM VRE #8872 (Released): Create a VRE for E-RIHS
Leonardo Candela
01:29 PM VRE #8872 (Available): Create a VRE for E-RIHS
The VRE is available at https://services.d4science.org/group/e-rihs Leonardo Candela
12:45 PM VRE #8872 (Planned): Create a VRE for E-RIHS
Leonardo Candela
12:43 PM VRE #8872 (Released): Create a VRE for E-RIHS
This VRE is for supporting the European Research Infrastructure on Heritage Science
The VRE is mainly conceived to...
Leonardo Candela
10:47 AM Upgrade #8730 (Completed): /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
Roberto Cirillo
09:27 AM Incident #8860 (Closed): Sharing of post does not handle eventual consistency properly
Costantino Perciante
09:26 AM Incident #8860 (In Progress): Sharing of post does not handle eventual consistency properly
I have analysed the flow of execution of the code when a user writes a post, and taking into account the fact that @a... Costantino Perciante

Jun 06, 2017

07:32 PM VM Creation #8855 (In Progress): Create a clone of CKAN instance for BB
ckan-bb2.d4science.org running with 6 GB of ram and 16 Gb of disk at the moment. Tommaso Piccioli
04:12 PM VM Creation #8855 (Closed): Create a clone of CKAN instance for BB
As a result of tests performed in Task #8425 in order to solve the issue (reduce loading time of dataset pages), the ... Francesco Mangiacrapa
07:32 PM VM Creation #8854 (In Progress): Create a clone of CKAN instance for SBD
ckan-sobigdata2.d4science.org running with 6 GB of ram and 16 Gb of disk at the moment. Tommaso Piccioli
03:30 PM VM Creation #8854 (Closed): Create a clone of CKAN instance for SBD
As a result of tests performed in Task #8425 in order to solve the issue (reduce loading time of dataset pages), the ... Francesco Mangiacrapa
07:13 PM Incident #8860: Sharing of post does not handle eventual consistency properly
Here the exception
~~~
2017-06-06 14:23:46,973 INFO server.ShareUpdateServiceImpl [http-bio-9090-exec-124,shareP...
Massimiliano Assante
07:13 PM Incident #8860 (Closed): Sharing of post does not handle eventual consistency properly
The user Anna shared a post on the VRE /d4science.research-infrastructures.eu/D4Research/ICES_AbundanceEstimationFrom... Massimiliano Assante
05:54 PM Task #8858: Monitor OrientDB instances
Please note that due to OrientDB bug I found we need to currently run with just one node.
https://github.com/orien...
Luca Frosini
05:50 PM Task #8858 (Closed): Monitor OrientDB instances
Orient DB instances must be monitored by using all oru checks: Ganglia, Munin, Nagios.
The nodes already appear in...
Luca Frosini
05:48 PM VM Creation #8767: Provide a new machine for the catalogue-ws
renamed to catalogue-ws.d4science.org Tommaso Piccioli
05:02 PM VM Creation #8767 (In Progress): Provide a new machine for the catalogue-ws
catalogue-ws-d4s.d4science.org is running. Tommaso Piccioli
05:43 PM VM Creation #8756 (In Progress): Please Create VM to install Accounting Service - 2
accounting-service2.d4science.org is running Tommaso Piccioli
05:42 PM VM Creation #8754 (In Progress): Please Create VM to install Accounting Service - 1
accounting-service1.d4science.org is running Tommaso Piccioli
05:41 PM VM Creation #8755: Please Create VM to install Resource Registry - 2
renamed to resource-registry2.d4science.org Tommaso Piccioli
05:06 PM VM Creation #8755 (In Progress): Please Create VM to install Resource Registry - 2
resourceregistry2-d4s.d4science.org is running. Tommaso Piccioli
05:41 PM VM Creation #8753: Please Create VM to install Resource Registry - 1
renamed to resource-registry1.d4science.org Tommaso Piccioli
05:04 PM VM Creation #8753 (In Progress): Please Create VM to install Resource Registry - 1
resourceregistry1-d4s.d4science.org is running. Tommaso Piccioli
05:33 PM Task #8778: Accounting Status in Production
Monthly aggregation was not scheduled.
@pasquale.pagano@isti.cnr.it as we agreed monthly aggregation will be sche...
Luca Frosini
04:42 PM Task #8778: Accounting Status in Production
Last Monthly aggregation was made at 17/05/2017 and the last day was 17/11/2016.
Going to investigate why is not r...
Luca Frosini
05:03 PM VM Creation #8779 (In Progress): Create new VM for ResourceManager on D4Research
resourcemanager-d4research.d4science.org is running. Tommaso Piccioli
02:14 PM Task #8787 (Closed): mongo2-d-d4s: is not synchronized with other cluster members
mongo2-d-d4s is now aligned with the cluster. Roberto Cirillo
 

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