D4Science Infrastructure

I'm attaching a contextualization script that fixes all the three problems. It's the one used in dev, but the others differ only for the scopes list.
Here is the diff against the original, too:

--- dev-init-script.orig    2017-06-27 13:20:17.000000000 +0200
+++ dev-init-script 2017-06-27 13:33:07.000000000 +0200
@@ -6,10 +6,10 @@
 export INFRA_NAME="gcube"
 export SMARTGEARS_SCOPES="/gcube /gcube/devsec /gcube/devNext"
 export SMARTGEARS_TOKEN='token'
+export AUTHORIZE_CHILDREN='true'

 # This script is installed into the VM instance
 PATH="/bin:/sbin:/usr/bin:/usr/sbin:$PATH"
-AUTHORIZE_CHILDREN=true
 HOSTS_FILE=/etc/hosts
 PUBLIC_IP=$( wget http://ipecho.net/plain -qO - )
 MAIN_IP=$( ip addr show scope global dev eth0 | grep inet | awk '{ print $2 }' | cut -d "/" -f 1 )
@@ -31,4 +31,15 @@
 grep -v $PUBLIC_IP $HOSTS_FILE > $HOSTS_FILE.tmp
 echo "$PUBLIC_IP $PUB_FQDN_HOST $HOST" >> $HOSTS_FILE.tmp
 mv $HOSTS_FILE.tmp $HOSTS_FILE
+#
+service tomcat-instance-9000 stop
+chmod 755 /home/gcube
+rm -fr /home/gcube/tomcat/webapps/whn-manager
+grep -v authorizeChildrenContext /home/gcube/SmartGears/container.xml > /tmp/container1.xml
+grep -v \<\/container\> /tmp/container1.xml > /tmp/container2.xml
+echo "<authorizeChildrenContext>true</authorizeChildrenContext>" >> /tmp/container2.xml
+echo "</container>" >> /tmp/container2.xml
+mv /tmp/container2.xml /home/gcube/SmartGears/container.xml
+chown gcube:gcube /home/gcube/SmartGears/container.xml
+service tomcat-instance-9000 start
 exit 0

@nunzioandrea.galante@eng.it can you change the fhn-manager so that it uses the new script?

Thanks Andrea. New references to the context scripts are the following:

• Prod: http://data.d4science.org/MVoyZ2NIRGozYWhSLzcybU4zRmJoUG1FTG9GR3JnNmtHbWJQNStIS0N6Yz0
• Dev: http://data.d4science.org/b050TTA2TVh4UjlSLzcybU4zRmJoUDdKekVJa1psaitHbWJQNStIS0N6Yz0
• PreProd: http://data.d4science.org/ajNncDhidzhWbUpSLzcybU4zRmJoQ2tXbnRMcUtPUzZHbWJQNStIS0N6Yz0 Such attribute will be updated in the Information System (for both the three environments) as soon as possible.

Information System has been updated as well.