Activity
From May 31, 2015 to Jun 29, 2015
Jun 29, 2015
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07:57 PM Task #299: New VM to host a Virtuoso instance
 - Added a role that installs virtuoso from the ubuntu packages and sets a more sane 'virtuoso' user instead of root.
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07:31 PM Task #208: Prepare and process Indian Ocean Tuna Commission catch statistics
 - In order to discover inner periodicities in the trends, we applied short-time Fourier analysis. This technique uses a...
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05:15 PM Task #319 (Closed): Mount /tmp folder on SAN for descramble.d4science.org
 - Done.
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03:43 PM Task #319 (Closed): Mount /tmp folder on SAN for descramble.d4science.org
 - The /tmp folder of descramble.d4science.org should be on a SAN and of at least 50 GB
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04:44 PM Incident #318 (Closed): Error uploading file onto the Workspace from service
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04:44 PM Incident #318: Error uploading file onto the Workspace from service
 - We have fixed the issue removing all RMI calls from HL to Jackrabbit.
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02:58 PM Incident #318: Error uploading file onto the Workspace from service
 - Up to now, in order to address the issue we have:
1. updated security packages on statistical-manager.d.d4science.... - 
  
02:52 PM Incident #318 (Closed): Error uploading file onto the Workspace from service
 - After introducing https communication with the Workspace, there is a blocking issue on the Statistical Manager when u...
 
Jun 26, 2015
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06:27 PM Task #317: manage.research-infrastructures.eu needs some love
 - I forgot: the ability to bulk add users from a text file.
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06:26 PM Task #317 (Rejected): manage.research-infrastructures.eu needs some love
 - The application needs a better look and lacks some basic functionalities. While waiting a more modern authentication ...
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04:49 PM Incident #258: TabMan - the files associated to the resources are downloaded without extension
 - One possible solution has been realized and is put on dev portal. 
GP can check if it is okay. - 
  
04:36 PM Task #208: Prepare and process Indian Ocean Tuna Commission catch statistics
 - Figure 7 reports the spatial extension of the overall fishing locations and of their respective barycenters at differ...
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03:14 PM Task #208: Prepare and process Indian Ocean Tuna Commission catch statistics
 - The attached figures report several representations of the benchmark IOTC data. Figure 1 and 2 show the spatial distr...
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02:29 PM Task #172: Shut down the old d4science Trac instance
 - Pasquale Pagano wrote:
> According to my knowledge
>
> > d4science.research-infrastructures.eu
> - to be dismis... - 
  
01:51 PM Task #307 (In Progress): New SSL certificates for manage.research-infrastructures.eu and issue.openaire.research-infrastructures.eu
 - These are all the names in the manage.research-infrastructures.eu
X509v3 Subject Alternative Name:
... - 
  
01:45 PM Support #306 (Feedback): Install additional R packages on the Worker nodes to support IRD - IFREMER computations
 - The two plugins are installed on all the worker nodes. Hope I got the right nodes list:
~~~
node11.d4science.org ... - 
  
01:43 PM Support #306: Install additional R packages on the Worker nodes to support IRD - IFREMER computations
 - I added a new script called `install_R_modules.sh` inside the d4science-ghn-cluster.
It runs the playbook with the... - 
  
01:41 PM Task #315 (Closed): Expand the R ansible role to let it install R plugins from sources
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01:41 PM Task #315 (In Progress): Expand the R ansible role to let it install R plugins from sources
 - The source files are downloaded inside /var/cache/R and installed from there.
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01:40 PM Task #315 (Closed): Expand the R ansible role to let it install R plugins from sources
 - Some R plugins need to be installed from source.
Add this step to the library R role. 
Jun 25, 2015
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05:53 PM Task #299: New VM to host a Virtuoso instance
 - We will start with a 300GB data disk
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05:33 PM Task #299 (In Progress): New VM to host a Virtuoso instance
 - Other requirements:
8 GB RAM
2 CPUs
1 TB data disk
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05:32 PM Task #299: New VM to host a Virtuoso instance
 - The new VM hostname will be virtuoso-openaire.d4science.org. Its IP 146.48.123.6.
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05:36 PM Support #306 (In Progress): Install additional R packages on the Worker nodes to support IRD - IFREMER computations
 - Only a fraction of the worker nodes are installed via the provisioning system. I'm going to create a (hopefully) temp...
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03:12 PM Support #306 (Closed): Install additional R packages on the Worker nodes to support IRD - IFREMER computations
 - The following packages are required on the Worker nodes machines both in the development and the production environme...
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05:32 PM Task #301 (Closed): New servername for node0.d.dli.research-infrastructures.eu
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01:11 PM Task #301 (Feedback): New servername for node0.d.dli.research-infrastructures.eu
 - Done.
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12:47 PM Task #301: New servername for node0.d.dli.research-infrastructures.eu
 - I need also installed the following python modules using pip:
-flask (latest)
-pysolr - 
  
11:32 AM Task #301 (In Progress): New servername for node0.d.dli.research-infrastructures.eu
 - The hostname has been registered on the DNS server.
The virtualhost is ready to be provided.
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11:13 AM Task #301 (Closed): New servername for node0.d.dli.research-infrastructures.eu
 - The hostname is crossdata.research-infrastructure.eu and needs to be associated to a virtualhost that redirects all t...
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04:09 PM Task #281: Move to the D4Science.org domain from the Research infrastructure domain
 - The new URL are now working for plain http.
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03:42 PM Task #281 (In Progress): Move to the D4Science.org domain from the Research infrastructure domain
 - Added nexus.d4science.org as CNAME for maven.research-infrastructures.eu and ci.d4science.org as CNAME for master.ci....
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03:57 PM Task #294: SSL certificates for the couchdb cluster
 - These 2 certificate requested:
accounting-d4s.d4science.org
couchdb-d4s.d4science.org
with alternative nam... - 
  
03:56 PM Task #308 (In Progress): SSL certificates needed for nexus.d4science.org and ci.d4science.org
 - 3 certificates requested
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03:44 PM Task #308: SSL certificates needed for nexus.d4science.org and ci.d4science.org
 - Andrea Dell'Amico wrote:
> We need SSL certificates for the two hosts:
>
> nexus.d4science.org
> ci.d4science.or... - 
  
03:38 PM Task #308 (Closed): SSL certificates needed for nexus.d4science.org and ci.d4science.org
 - We need SSL certificates for the two hosts:
nexus.d4science.org
ci.d4science.org - 
  
03:29 PM Task #307 (Closed): New SSL certificates for manage.research-infrastructures.eu and issue.openaire.research-infrastructures.eu
 - The two services need certificates from a _known_ CA.
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03:16 PM Task #287: Integrate IRD-IFREMER stock assessment processes
 - The process is compatible with the e-Infrastructure nodes. 
I have parametrized the inputs and made the process re... - 
  
12:46 PM Incident #303 (Closed): Create alias for support.d4science.org (support.d4science.research-infrastructures.eu)
 - We still have production applications redirecting to the previous TRAC (support.d4science.research-infrastructures.eu...
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12:16 PM Task #296 (In Progress): Ask https certificate for bluebridge.d4science.org
 - Certificate requested.
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10:10 AM Support #280 (Closed): ETICS down
 
Jun 24, 2015
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10:03 PM Support #300 (Closed): Add the D-Net people to the d4science project
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10:01 PM Support #300 (In Progress): Add the D-Net people to the d4science project
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08:40 PM Support #300 (Closed): Add the D-Net people to the d4science project
 - The D-Net people need access to the d4science infrastructure project
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08:38 PM Task #299 (Closed): New VM to host a Virtuoso instance
 - A new VM is needed to host a virtuoso install for the OpenAire project. See https://issue.openaire.research-infrastru...
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07:50 PM Task #290 (In Progress): Update D4Science Org Website Empowering Section with new projects served by the Infrastructure
 - Please find below some candidate text I managed to draft. Comments are welcome.
I doubt the current layout works w... - 
  
04:48 PM Task #294 (In Progress): SSL certificates for the couchdb cluster
 - We only need a certificate for accounting-d4s.d4science.org, for now.
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12:05 PM Task #294 (Paused): SSL certificates for the couchdb cluster
 - We have to wait, the final architecture could be different.
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12:04 PM Task #294 (In Progress): SSL certificates for the couchdb cluster
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04:47 PM Task #279 (Closed): Install the Fauxton couchdb interface
 - This becomes part of the couchdb 2.0 install
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04:46 PM Task #110 (In Progress): Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - couchdb 1.6 is too limited and its replica mechanism very fragile.
The still unreleased 2.0 version has a better c... - 
  
03:41 PM Task #289 (Closed): Create Liferay Theme for Descramble Project VRE
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03:40 PM Task #288 (Closed): Deploy gCube Portal Bundle on descramble.d4science.org
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12:17 PM Task #297: New ldap instance
 - Actually it will be used by liferay to export all the users registered on the portals, whether they are or not presen...
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12:10 PM Task #297 (Closed): New ldap instance
 - A new (open)ldap instance is needed.
It will be used by liferay to memorize the users registered on the portals and ... - 
  
12:07 PM Task #207 (Closed): Document the R installation on the statistical-manager nodes.
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10:43 AM Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)
 - Luca Frosini wrote:
> @massimiliano.assante so you can patch liferay to insert in the "external" LDAP the users inst... - 
  
10:40 AM Task #296 (Closed): Ask https certificate for bluebridge.d4science.org
 - A new certificate should is necessary for bluebridge.d4science.org
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09:47 AM Task #208: Prepare and process Indian Ocean Tuna Commission catch statistics
 - In the following, I report a workflow for this activity. The approach will use catch statistics by IOTC as a case stu...
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08:47 AM Incident #295 (Closed): D4Science site down ...
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08:47 AM Incident #295 (In Progress): D4Science site down ...
 
Jun 23, 2015
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07:34 PM Incident #295 (Closed): D4Science site down ...
 - While editing one of the pages of www.d4science.org the site start becoming unresponsive. 
It is currently down.
... - 
  
05:40 PM Task #110 (Feedback): Create 3 Virtual Machine for developement to host new noSQL Db cluster
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05:40 PM Task #110 (In Progress): Create 3 Virtual Machine for developement to host new noSQL Db cluster
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04:57 PM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - The three machines are configured. There is an admin user.
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05:40 PM Task #279 (In Progress): Install the Fauxton couchdb interface
 - The git repo: https://github.com/apache/couchdb-fauxton
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05:32 PM Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)
 - @massimiliano.assante so you can patch liferay to insert in the "external" LDAP the users instead of creating only on...
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04:36 PM Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)
 - Yes liferay can support more than one ldap server
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04:09 PM Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)
 - Massimiliano Assante wrote:
> The Redmine instance for a given project should be accessed by any VRE user serving th... - 
  
03:26 PM Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)
 - For example the users belonging to the PARTHENOS VRE should be able to join the Redmine instance of Parthenos
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03:25 PM Task #293 (Closed): Make any Liferay user to access Redmine (through LDAP Credentials)
 - The Redmine instance for a given project should be accessed by any VRE user serving this project. 
In this moment we... - 
  
05:10 PM Task #294 (Closed): SSL certificates for the couchdb cluster
 - Four cerficates are needed for the hosts:
couchdb01-d4s.d4science.org
couchdb02-d4s.d4science.org
couchdb03-d4s.d4... - 
  
04:49 PM Task #288: Deploy gCube Portal Bundle on descramble.d4science.org
 - The Portal Bundle was Deployed, configuration is in progress http://descramble.d4science.org
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12:16 PM Task #288 (In Progress): Deploy gCube Portal Bundle on descramble.d4science.org
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12:14 PM Task #288 (Closed): Deploy gCube Portal Bundle on descramble.d4science.org
 - The descramble.d4science.org should me empowered by the gCube Portal Bundle
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04:24 PM Task #286 (Closed): Integrate algorithms developed by Brazilian student
 - The integration was successful also on the student's side.
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01:11 PM Task #286 (In Progress): Integrate algorithms developed by Brazilian student
 - The algorithm has been integrated and is currently running in the PGFA-UFMT vre. 
Here is the link to the StatMan in... - 
  
10:45 AM Task #286 (Closed): Integrate algorithms developed by Brazilian student
 - A request came to integrate an algorithm developed by a Brazilian student on the PGFA-UFMT VRE.
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03:24 PM Task #290: Update D4Science Org Website Empowering Section with new projects served by the Infrastructure
 - EGI-Engage should be reported but not here. In this case we should report that D4Science exploits EGI FedCloud resour...
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03:14 PM Task #290 (Closed): Update D4Science Org Website Empowering Section with new projects served by the Infrastructure
 - This page (https://www.d4science.org/empowering) should be modified by adding the new projects 
* PARTHENOS
* DES... - 
  
12:15 PM Task #289 (Closed): Create Liferay Theme for Descramble Project VRE
 - A new Liferay 6.0 Theme should be created for supporting the Descramble Project VRE
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10:52 AM Task #287 (Closed): Integrate IRD-IFREMER stock assessment processes
 - A stock assessment process developed by IRD and IFREMER has to be integrated with StatMan and possibly parallelised. ...
 
Jun 22, 2015
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06:48 PM Task #262 (Closed): Create new VM for descramble.d4science.org
 - descramble.d4science.org up and running
apache proxy reconfigured with new name and SSL certificate
Note that you m... - 
  
10:28 AM Task #262: Create new VM for descramble.d4science.org
 - Tom, we need this VM asap
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06:48 PM Task #259 (Closed): Ask https certificate for descramble.d4science.org
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06:23 PM Task #259 (Resolved): Ask https certificate for descramble.d4science.org
 
Jun 20, 2015
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09:14 AM Support #280 (In Progress): ETICS down
 - DNS issues have been solved. The system is now accessible.
Please check from your side. 
Jun 19, 2015
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06:49 PM Task #172: Shut down the old d4science Trac instance
 - Pasquale Pagano wrote:
> Claudio/ Paolo, please tell us what to do with the following
> > driver.research-infrast... - 
  
06:33 PM Task #172: Shut down the old d4science Trac instance
 - According to my knowledge 
> d4science.research-infrastructures.eu
- to be dismissed
> gcore.research-infrastruc... - 
  
06:15 PM Incident #163 (Closed): Redmine - change the duration of the working day
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05:55 PM Incident #171 (Closed): Recently updated file for gCubeApps/BlueBridgeProject Folder error
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05:45 PM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - Ok, thanks. This issue is therefore related to a bud in the HL. I suggest to close this ticket and open a specific on...
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05:15 PM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - The problem for "BlueBRIDGE_Part_B_Sec1-3 20150113.docx" file, has been identified:
if we try to move a file to anot... - 
  
05:54 PM Task #281 (Closed): Move to the D4Science.org domain from the Research infrastructure domain
 - The following machine should become available under the d4science.org domain
- http://maven.research-infrastructur... - 
  
05:15 PM Support #280: ETICS down
 - I got confirmation there are DNS problems at company level. The support team is currently working at it.
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04:52 PM Support #280: ETICS down
 - The server and service are up; however they seem to be unreachable from the outside.
I'm asking support to the netwo... - 
  
04:34 PM Support #280 (Closed): ETICS down
 - The etics server seems to be down:
https://etics.esl.eng.it/etics-gui/
Could anyone check it, please? - 
  
03:53 PM Task #87: Make new gCube and D4Science wiki available only on https
 - The ssl certificates are in place. To enable ssl the needed steps are:
Set
~~~
http_ssl_enabled
~~~
to *True*
... - 
  
03:47 PM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 
Two mediawiki instances are now deployed on wiki.d4science.org. The root directories are:
~~~
ls -l /var/www/
...- 
  
03:16 PM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - The latest stable version has a PPA, here: https://launchpad.net/~couchdb/+archive/ubuntu/stable
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03:13 PM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - The VMs will be: couch{01:03}-d4s.d4science.org.
The same cluster will serve devel and production.
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02:17 PM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - Reference for couchdb can be found here
http://docs.couchdb.org/en/latest/cluster/theory.html - 
  
03:15 PM Task #279 (Closed): Install the Fauxton couchdb interface
 - On a dedicated machine. Needs node.js.
fauxton-d4s.d4science.org
 
Jun 18, 2015
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04:35 PM Task #272 (In Progress): Enabling Secure Connections to node11.d.d4science.research-infrastructures.eu
 - Installed apache, mod-proxy, ajp enabled
Now the proxy answer on https://workspace-repository-dev.research-infrast... - 
  
12:32 PM Task #272 (Closed): Enabling Secure Connections to node11.d.d4science.research-infrastructures.eu
 - Home Library 2.0 needs secure connections to pass Jackrabbit credentials from client to server.
Please, enable secur... - 
  
12:04 PM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - History of "BlueBRIDGE_Part_B_Sec1-3 20150113.docx" in attachment.
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10:50 AM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - No I wanted to recover another older backup but unfortunately we don't have a backup before the 31 January.
I've als... - 
  
11:37 AM Incident #258: TabMan - the files associated to the resources are downloaded without extension
 - We cannot assume here that file names always have or always miss extension (I think also it depends on the particular...
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10:59 AM Incident #258 (In Progress): TabMan - the files associated to the resources are downloaded without extension
 - If we determine that any resource that reaches the portlet has a name without an extension and a mimetype correct, th...
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11:20 AM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - @andrea.dellamico as far as I know, we don't have any requirements in this sense. I think the best way is the simples...
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11:17 AM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - Why me? Who is the owner of this activity? I don't have never worked on wiki media... but, of course, if I can help y...
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11:03 AM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - @roberto.cirillo can collaborate with @andrea.dellamico and @tommaso.piccioli for this task and the task #87
 
Jun 17, 2015
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12:19 PM Task #87: Make new gCube and D4Science wiki available only on https
 - Remember that the configuration steps can chagne depending on the number of VMs. See ticket #85
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11:46 AM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - Andrea Dell'Amico wrote:
> The two mediawiki instances will run on the same server or there will be two separate VMs... 
Jun 16, 2015
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05:36 PM Task #99 (Closed): run mongoDB as unprivileged user
 - done on all nodes, al mongodb now running as mongodb user, automatic start and stop script tested.
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03:49 PM Task #259 (In Progress): Ask https certificate for descramble.d4science.org
 - SSL certificate requested
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12:35 PM Task #259 (Closed): Ask https certificate for descramble.d4science.org
 - DESCRAMBLE Project to be hosted on the D4Science Infrastructure
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01:05 PM Task #262 (Closed): Create new VM for descramble.d4science.org
 - The VM should be a clone of egip.d4science.org
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11:22 AM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - I'm ready for testing CouchDB.
I'm going to read the deployment documentation for production environment to decide w... - 
  
09:59 AM Support #246: Comment editing changes comment "metadata" namely data
 - My proposal is as follows:
* mark the comment as "edited" and keep the time of the first comment;
* change the but... 
Jun 15, 2015
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11:58 PM Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster
 - Do we have a hint about the couchdb architecture that is to be implemented?
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10:11 PM Support #246: Comment editing changes comment "metadata" namely data
 - I did not completely understand the answer. If the time time is changed and this breaks the discussion thread then we...
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10:06 PM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - why this activity has been paused? Are you waiting for feedback?
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09:32 PM Task #88: Migrate gCube and D4Science WIKI content on new installation
 - It is not possible to accumulate so much delay on an activity. If the task is not intended to be supported please rea...
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06:31 PM Incident #258 (Closed): TabMan - the files associated to the resources are downloaded without extension
 - After producing an image via StatMan, the resources attached to the table have correct names but they are downloaded ...
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06:21 PM Incident #257 (Closed): TabMan - GIS Legend
 - When producing a GIS map with TabMan in the production environment, if the column to attach to the map contains numbe...
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02:52 PM Task #176 (In Progress): Configure DSS to support EUDAT-D4Science integration
 
New document from Cineca: http://eudat.eu/User%20Documentation%20-%20B2STAGE.html
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12:36 PM Task #248 (Closed): No mongodb server rotates its logs
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12:36 PM Task #248 (In Progress): No mongodb server rotates its logs
 - I've enabled the log rotation on all the instances in this way:
From the mongo shell, issue the logRotate command ... 
Jun 12, 2015
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06:22 PM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - The two mediawiki instances will run on the same server or there will be two separate VMs?
 - 
  
06:19 PM Task #87 (In Progress): Make new gCube and D4Science wiki available only on https
 - The SSL configuration is ready to be deployed.
Before switching to ssl it should be better to test if the site works... - 
  
02:29 PM Task #249 (Closed): Add Cookies Policy and Cookies Banner to Portals served by the Infrastructure
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02:28 PM Task #249 (Resolved): Add Cookies Policy and Cookies Banner to Portals served by the Infrastructure
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11:03 AM Task #249 (In Progress): Add Cookies Policy and Cookies Banner to Portals served by the Infrastructure
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02:27 PM Task #172: Shut down the old d4science Trac instance
 - Any news?
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02:26 PM Task #98 (Closed): MongoDB in production: allow only trusted connections
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02:07 PM Task #99: run mongoDB as unprivileged user
 - This activity has already been done by Tommaso in development environment. I guess Tommaso know the sequence of steps...
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01:24 PM Task #99: run mongoDB as unprivileged user
 - I assume the nodes are:
~~~
node58.p.d4science.research-infrastructures.eu
node67.p.d4science.research-infrastru... - 
  
11:03 AM Support #246: Comment editing changes comment "metadata" namely data
 - the time is modified you are right, but that was thought to not make people change their previous pretend to have sai...
 - 
  
10:22 AM Incident #171 (Paused): Recently updated file for gCubeApps/BlueBridgeProject Folder error
 
Jun 11, 2015
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07:28 PM Task #176: Configure DSS to support EUDAT-D4Science integration
 - We had a conference call with Giovanni Morelli, he asked to wait for more precise guidelines. He will send them in th...
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05:55 PM Task #249: Add Cookies Policy and Cookies Banner to Portals served by the Infrastructure
 - The portlet for the banner working on Liferay 6.0 is already implemented and deployed on social.isti.cnr.it, I am goi...
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05:51 PM Task #249 (Closed): Add Cookies Policy and Cookies Banner to Portals served by the Infrastructure
 - In particular the Cookies Policy should be added to:
* services.d4science.org
* i-marine.d4science.org
* egip.d4... - 
  
05:37 PM Task #248 (Closed): No mongodb server rotates its logs
 - All the mongodb instances never rotate their log files. The production cluster log files are over 1GB on every node.
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04:29 PM Task #98 (Feedback): MongoDB in production: allow only trusted connections
 - The iptables rules are now active.
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03:43 PM Task #98: MongoDB in production: allow only trusted connections
 - Yes Andrea. Please, include all these network.
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03:35 PM Task #98 (In Progress): MongoDB in production: allow only trusted connections
 - I did not found any connections from .tw hosts, but I composed a list that includes more that what initially asked:
... - 
  
03:51 PM Support #246 (Closed): Comment editing changes comment "metadata" namely data
 - The semantic of the edit is quite questionable since I'm allowed to modify my comment yet:
* the comment time is mod... - 
  
03:11 PM Incident #245: When an invite is performed more than once the button invite disappears and only Close is available
 - Ready To Release
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03:11 PM Incident #245 (Closed): When an invite is performed more than once the button invite disappears and only Close is available
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03:10 PM Incident #245 (Closed): When an invite is performed more than once the button invite disappears and only Close is available
 
Jun 10, 2015
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05:07 PM Task #98: MongoDB in production: allow only trusted connections
 - I've found some networks recently used to protect another service on node21.p.d4science.research-infrastructures.eu:
... - 
  
04:35 PM Support #238 (Rejected): The nagios check 'gcube search' goes often in critical state
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04:35 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - then the ticket can be closed for me.
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04:07 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - It's working correctly since the start of the month, but it flipped a lot in May.
When if fails it's always becaus... - 
  
02:04 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - okay, clear now.
Is the second (search) failing now? It should not because if I click on http://portal.i-marine.d4sc... - 
  
01:00 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - I attach the two scripts to clarify.
 - 
  
12:55 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - Sorry, I just noted that the formatting lost a part of the script. The line
~~~
wget http://$1/images/report/xml ... - 
  
12:47 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - If my Analysis is right you may need to correct the Nagios check
 - 
  
12:44 PM Support #238: The nagios check 'gcube search' goes often in critical state
 - I think this check is messy, it seems mixing the check on the Images Servlet serving the iOS and Android app AppliFis...
 - 
  
12:21 PM Task #208: Prepare and process Indian Ocean Tuna Commission catch statistics
 - In this ticket we report a process for catch statistics having the following aims:
1. producing the trends of the ... - 
  
11:26 AM Task #117 (Closed): Execute FAO MSY on the complete FAO Dataset
 - The results have been sent to Yimin Ye of FAO.
 
Jun 09, 2015
- 
  
05:11 PM Task #100: Increase ram Memory on IS-Collector services in production
 - It needs to be done during the next downtime.
 - 
  
05:09 PM Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org
 - It seems that we only need to ask for the wiki backups.
Tommaso is going to email the Greeks.
After that we will ... - 
  
01:16 PM Incident #232 (Closed): node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - The iptables rules are active.
 - 
  
12:42 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - No it is a feature of ehcache that is not being exploited. Searchsystem's ehcache does not talk with other service in...
 - 
  
12:37 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - John Gerbesiotis wrote:
> Yes searchsystem uses ehcache and the default port of ehcache is 4446.
And that port is... - 
  
12:26 PM Incident #232 (In Progress): node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - Andrea, do you want to add an iptables rule for this port?
 - 
  
12:24 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - I think we can close the ticket now
 - 
  
12:21 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - Yes searchsystem uses ehcache and the default port of ehcache is 4446.
 
Jun 08, 2015
- 
  
06:31 PM Support #238 (Rejected): The nagios check 'gcube search' goes often in critical state
 - The "Gcube search" nagios check on portal.i-marine.d4science.org is often in critical state. The script source code i...
 - 
  
06:19 PM Task #213 (Closed): Create a new machine to host the mongodb server used by the accounting service
 - The nagios checks are active.
 - 
  
06:16 PM Support #233 (Closed): node65.p.d4science.research-infrastructures.eu increase memory RAM
 - 
  
06:15 PM Support #233: node65.p.d4science.research-infrastructures.eu increase memory RAM
 - The VM and the IS-Registry service have been restarted succesfully
 - 
  
12:31 PM Support #233: node65.p.d4science.research-infrastructures.eu increase memory RAM
 - I've also increased the heap size. We could restart the VM today at 18:10 CEST
 - 
  
12:05 PM Support #233 (In Progress): node65.p.d4science.research-infrastructures.eu increase memory RAM
 - I've just increased the available RAM in the xen configuration file for the machine. A shutdown is needed, let me kn...
 - 
  
10:23 AM Support #233 (Closed): node65.p.d4science.research-infrastructures.eu increase memory RAM
 - The IS-Registry service hosted on node65.p.d4science.research-infrastructures.eu has memory problems. it need to incr...
 - 
  
06:02 PM Support #229 (Closed): Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - 
  
04:44 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - I've notice on node51.p there are the ehcache jars. I don't know how the ehcache is configured but I've seen that a k...
 - 
  
04:26 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - I suggest limiting 4446 to subnet only.
 - 
  
04:23 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - Port 8009 is now closed. What's worrying me is udp 4446, it's opened by one of the tomcat webapps but I don't know if...
 - 
  
04:15 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - Well, search services should be publicly available for REST APIs also, as such, 8080 should be public at least. We co...
 - 
  
04:03 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - as John said, for this VM I think is better to limit access to our subnet. The services hosted on node51.p have to ...
 - 
  
12:49 PM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - Searchsystem service communicates with elasticsearch, which is on another vm and with pottal.
To my knowledge, ela... - 
  
11:52 AM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - I don't know this. The d4science services hosted on this VM are related to an elastic search cluster and, maybe, this...
 - 
  
11:38 AM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - It surely needs to be closed.
The ajp port is always of no use on our systems, because we always use the http port... - 
  
11:34 AM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - If there isn't an apache frontend on this host, I think is better to disable the 8009 port in the server.xml file. I...
 - 
  
11:04 AM Incident #232: node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - On node51.p (pre production host) there are the following services:
- executionengineservice-search
- searchsystems... 
Jun 06, 2015
- 
  
12:44 PM Incident #232 (Closed): node51.p.d4science.research-infrastructures.eu webapp unresponsive. The ajp port is open with connections from China
 - The 8080 (and 8005) tomcat port has been closed since last night.
The actual 'netstat -na' output is:
~~~
Active... 
Jun 05, 2015
- 
  
05:27 PM Support #229: Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - The icproxy webapp has been deployed on node79.d4science.org. It seems to be configured properly. Currently is under ...
 - 
  
04:51 PM Support #229 (Feedback): Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - 
  
04:51 PM Support #229 (In Progress): Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - The machine is ready.
There's a nginx frontend that runs on port 80 and act as a proxy for the tomcat instance.
 - 
  
03:28 PM Support #229: Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - The hostname will be node79.d4science.org, IP 146.48.122.79
 - 
  
02:27 PM Support #229: Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - Roberto Cirillo wrote:
> Java7
> tomcat
> smartgears distribution 1.2.2
> 2 vcpu
> 2 GB ram
>
> the new ... - 
  
02:27 PM Support #229 (Closed): Create a new virtual machine to host the ic-proxy webapp managed by smartgears
 - 1. Java7
2. tomcat
3. smartgears distribution 1.2.2
4 2 vcpu
5 2 GB ram
the new machine should be available fo... 
Jun 04, 2015
- 
  
05:31 PM Task #183: tomcat running as root user under port 80
 - Roberto Cirillo wrote:
> The following list contains all tomcat instances in production, running as root user under ... - 
  
05:21 PM Task #183: tomcat running as root user under port 80
 - due to changes in a related task
 - 
  
05:27 PM Incident #212 (Closed): MongoDB for usageTracker should be upgraded.
 - 
  
05:19 PM Incident #212 (In Progress): MongoDB for usageTracker should be upgraded.
 - 
  
01:03 PM Incident #212 (Feedback): MongoDB for usageTracker should be upgraded.
 - 
  
01:03 PM Incident #212 (In Progress): MongoDB for usageTracker should be upgraded.
 - 
  
01:02 PM Incident #212: MongoDB for usageTracker should be upgraded.
 - I've changed the UsageTracker configuration for mongoDB. Now the UsageTracker service is connected to the new machine...
 - 
  
11:23 AM Incident #212: MongoDB for usageTracker should be upgraded.
 - The problem seems to be: 32 bit linux DISTRIBUTION with 64 Bit KERNEL.
I'm not able to donwload a 64bit package by a... - 
  
10:15 AM Incident #212 (Closed): MongoDB for usageTracker should be upgraded.
 - On node57.p (UsageTracker) run 32-bit mongoDB. This version is limited to only 2GB of datasize.
At this time it see... - 
  
05:25 PM Task #217 (Closed): Automate the installation and configuration of the statistical-manager nodes
 - All the components need to be automatically deployed.
 - 
  
05:23 PM Task #206: Automate the installation of wps.statistical.d4science.org
 - The news is that R is not needed.
R is actually present maybe because the machine is a clone of one of the smartgear... - 
  
05:21 PM Task #206: Automate the installation of wps.statistical.d4science.org
 - due to changes in a related task
 - 
  
05:21 PM Task #207: Document the R installation on the statistical-manager nodes.
 
The packages list describes the installation on the statistical-manager* nodes.- 
  
05:13 PM Incident #171: Recently updated file for gCubeApps/BlueBridgeProject Folder error
 - All the files were restored from a mongoDB  backup of 31 Jan 2015 except one:
BlueBRIDGE_Part_B_Sec1-3 20150113.docx... - 
  
03:12 PM Task #172: Shut down the old d4science Trac instance
 - I see a lot of other virtualdomains on issue.research-infrastructures.eu. Some are trac instances, some are 'portals'...
 - 
  
01:04 PM Task #213 (In Progress): Create a new machine to host the mongodb server used by the accounting service
 - We need the nagios checks.
 - 
  
12:57 PM Task #213 (Closed): Create a new machine to host the mongodb server used by the accounting service
 - There is a new playbook inside d4science-ghn-cluster that installs a configure a mongodb instance.
It can be extende... - 
  
12:56 PM Task #213 (In Progress): Create a new machine to host the mongodb server used by the accounting service
 - The machine is up and running.
 - 
  
11:52 AM Task #213: Create a new machine to host the mongodb server used by the accounting service
 - node57.p.d4science.research-infrastructures.eu's IP address: 146.48.122.135  (needed to manage the firewall rules).
 - 
  
11:51 AM Task #213: Create a new machine to host the mongodb server used by the accounting service
 - Hostname: mongo-0-ut-d4s.d4science.org
IP address: 146.48.123.0
 - 
  
11:49 AM Task #213 (Closed): Create a new machine to host the mongodb server used by the accounting service
 
1. Install mongodb 2.x
2. Mount the /data dir now used by node57.p
3. monitor mongodb via nagios
4. mongodb ac...
Jun 03, 2015
- 
  
05:53 PM Task #207: Document the R installation on the statistical-manager nodes.
 - I have tried to gather the offline and the online packages required for both the Statistical Manager and the WPS serv...
 - 
  
11:17 AM Task #207 (In Progress): Document the R installation on the statistical-manager nodes.
 - 
  
03:25 PM Task #208 (Closed): Prepare and process Indian Ocean Tuna Commission catch statistics
 - In order to support and promote processing of stock assessment data in BlueBridge, we were requested to analyse tuna ...
 - 
  
11:56 AM Task #98: MongoDB in production: allow only trusted connections
 - Roberto Cirillo wrote:
> 1. 28017 port should be closed from outside
Ok
> 2. I don't know if is possible to o... - 
  
11:08 AM Task #98: MongoDB in production: allow only trusted connections
 - 1. 28017 port  should be closed from outside
2. I don't know if is possible to obtain the networks from a domain nam... - 
  
11:16 AM Support #135 (Closed): Add a Favicon to Redmine Service
 - 
  
11:12 AM Support #135 (Resolved): Add a Favicon to Redmine Service
 - Favicon is in place.
 
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