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Support #306
closed
Install additional R packages on the Worker nodes to support IRD - IFREMER computations
Added by Gianpaolo Coro almost 10 years ago. Updated almost 10 years ago.
Start date:
Jun 26, 2015
Due date:
% Done:
100%
Estimated time:
(Total: 0.00 h)
Infrastructure:
Production
Description
The following packages are required on the Worker nodes machines both in the development and the production environments.
In the following I report the details:
PLYR:
available here: http://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.7.1.tar.gz
#installation
install.packages("plyr_1.7.1.tar.gz", repos = NULL, type="source")
#check
library(plyr)
RESHAPE:
#installation
install.packages("reshape")
#check
library(reshape)
Updated by Andrea Dell'Amico almost 10 years ago
- Status changed from New to In Progress
Only a fraction of the worker nodes are installed via the provisioning system. I'm going to create a (hopefully) temporary task that installs only the new required modules on all the other worker nodes.
Updated by Andrea Dell'Amico almost 10 years ago
I added a new script called install_R_modules.sh inside the d4science-ghn-cluster.
It runs the playbook with the r_plugins tag, so the only action performed is installing R plugins on both the production and dev hosts.
Updated by Andrea Dell'Amico almost 10 years ago
- Status changed from In Progress to Feedback
The two plugins are installed on all the worker nodes. Hope I got the right nodes list:
node11.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node12.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node13.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node14.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node15.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node16.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node17.d4science.org : ok=5 changed=0 unreachable=0 failed=0 node18.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node19.d4science.org : ok=5 changed=0 unreachable=0 failed=0 node20.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node21.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node22.d4science.org : ok=5 changed=0 unreachable=0 failed=0 node23.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node27.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node28.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node29.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node3.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node30.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node31.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node32.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node33.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node34.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node35.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node36.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node37.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node38.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node39.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node4.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node41.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node43.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node44.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node45.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node46.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node47.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node48.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node49.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node50.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node51.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node52.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node53.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node54.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node55.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node56.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node57.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node58.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node59.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node6.d4science.org : ok=5 changed=0 unreachable=0 failed=0 node60.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node61.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node62.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node63.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node64.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node65.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node66.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node67.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node68.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node69.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node70.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node71.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node72.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node73.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node74.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node75.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node76.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node77.d4science.org : ok=5 changed=4 unreachable=0 failed=0 node78.d4science.org : ok=5 changed=4 unreachable=0 failed=0
Updated by Andrea Dell'Amico almost 10 years ago
- Status changed from Feedback to Closed
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