Task #18232
open
Normalize Species before submitting them in GRSF VREs
10%
Description
Normalize species of records (both stocks and fisheries) before submitting them in GRSF VREs. Normalization will occur based on the following guidelines:
- code: all in capital letters (e.g. BLU)
- coding system: all in capital letters (e.g. ASFIS)
- scientific name: the first letter of the genus in capital and all the others in lower case (e.g. Pomatomus saltatrix).
In addition, remove any trailing or leading whitespace characters from any of the above.
Resolving this will solve issues like the one mentioned in #18070
Files
| GRSF_KW_pomatomus_saltatrix.jpg (68.5 KB) GRSF_KW_pomatomus_saltatrix.jpg | Lower case in scientific names within GRSF and local names |
Updated by Yannis Marketakis over 5 years ago
- Status changed from New to Closed
- % Done changed from 0 to 100
Implemented the normalization against Species.
As a side effect, several GRSF Stock records have been updated in GRSF Admin and GRSF VREs.
Updated by Aureliano Gentile over 5 years ago
Thanks a lot.
In https://i-marine.d4science.org/web/grsf/data-catalogue , however, I still find double tags for "Pomatomus saltatrix" and "pomatomus saltatrix".
Are any updates needed at catalogue level?
Updated by Yannis Marketakis over 5 years ago
- Status changed from Closed to In Progress
- % Done changed from 100 to 90
Thanks for spotting. It seems that fishery records weren't updated properly in the catalog. Will do it now.
Updated by Yannis Marketakis over 5 years ago
- Status changed from In Progress to Feedback
I've updated the Fishery records in both VREs.
@aureliano.gentile@fao.org could you please check?
Updated by Aureliano Gentile over 5 years ago
Thanks again, I made a few checks and now all scientific names tags seem fine.
For example the tag "Code BLU Classification System ASFIS Scientific Name Pomatomus saltatrix" now retrieves all of the 3 available records.
But one of them http://data.d4science.org/ctlg/GRSF/ff297333-fd3b-3835-bf83-096dbb6ab046 is with lower case GRSF and local names. But I guess that is another ticket ;-) (and less problematic at the moment)
Updated by Yannis Marketakis over 5 years ago
- Status changed from Feedback to In Progress
- % Done changed from 90 to 50
Unfortunately, the resolution for this one is more complex.
However, we'll proceed in fixing them. I propose to use this ticket as reference (so not creating a new one)
