Activity

From Jun 07, 2018 to Jul 06, 2018

Jul 06, 2018

09:46 PM D4Science Infrastructure VM Creation #12053 (Feedback): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: Hostname has been switched. @roberto.cirillo@isti.cnr.it fixed all the endpoint, the connector configuration has been... Andrea Dell'Amico
11:11 AM D4Science Infrastructure VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: I noticed that 3 items were added to old catalogue (https://ckan-sobigdata.d4science.org/) so their should be added t... Francesco Mangiacrapa
07:30 PM D4Science Infrastructure Task #12122 (Closed): Please Create parthenos.aggregator@d4science.org alias email address: Created as open mailing list
Contents of the parthenos.aggregator@d4science.org mailing list
pasquale.pagano@i... Tommaso Piccioli
07:18 PM D4Science Infrastructure Task #12122 (In Progress): Please Create parthenos.aggregator@d4science.org alias email address: Andrea Dell'Amico
07:14 PM D4Science Infrastructure Task #12122: Please Create parthenos.aggregator@d4science.org alias email address: Then let's go for `parthenos.aggregator@d4science.org` as Luca already suggested. How can a ticket be "unrejected"? Alessia Bardi
06:56 PM D4Science Infrastructure Task #12122 (Rejected): Please Create parthenos.aggregator@d4science.org alias email address: Massimiliano Assante
06:55 PM D4Science Infrastructure Task #12122: Please Create parthenos.aggregator@d4science.org alias email address: The email is taken and used from the PARTHENOS gateway (as sender and as mailbox where to get replies and likes from ... Massimiliano Assante
06:39 PM D4Science Infrastructure Task #12122: Please Create parthenos.aggregator@d4science.org alias email address: parthenos@d4science.org exists as mailbox because it was requested by @massimiliano.assante@isti.cnr.it
@massimili... Luca Frosini
03:56 PM D4Science Infrastructure Task #12122 (Closed): Please Create parthenos.aggregator@d4science.org alias email address: The alias email address should be pointed to:
* pasquale.pagano@isti.cnr.it
* alessia.bardi@isti.cnr.it
* luca.fro... Luca Frosini
05:25 PM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net: I'm still waiting for at least a day without the embargo. I cannot foresee it, I don't know how many certifcates are ... Andrea Dell'Amico
04:02 PM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net: The PerformFISH Gateway is ready, https://performfish.d4science.org however we are still waiting for the SSL Certific... Massimiliano Assante
04:11 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support: Any news on this, we would need to go LIVE soon with https://performfish.d4science.org Massimiliano Assante
03:39 PM D4Science Infrastructure Task #12121 (Closed): Enable Google and LinkedIn SSO on PerformFISH Gateway PerformFISH: Massimiliano Assante
03:34 PM D4Science Infrastructure Task #12121 (Closed): Enable Google and LinkedIn SSO on PerformFISH Gateway PerformFISH: Massimiliano Assante
03:33 PM D4Science Infrastructure Task #12098 (Closed): Production Gateways PerformFISH Site creation and Theme: Massimiliano Assante
12:01 PM D4Science Infrastructure Upgrade #12112 (In Progress): D4Science Preprod Gateway upgrade to gCube 4.12.0: Massimiliano Assante
10:07 AM D4Science Infrastructure Upgrade #12023 (In Progress): /gcube/preprod upgrade to gCube 4.12: Roberto Cirillo
04:48 AM D4Science Infrastructure VM Creation #12030 (Closed): Upgrade VM with Resource Registry instance: All my unit tests passed and I can ssh the node. Also, the installation looks good for what I can tell.
Thanks! Manuele Simi

Jul 05, 2018

07:31 PM D4Science Infrastructure Task #11332 (Closed): Change the openaire redmine instance to use ldap.d4science.org for the authentication: Done. The migration is complete, the old ldap service removed from the redmine configuration.
Andrea Dell'Amico
05:19 PM D4Science Infrastructure Task #11332 (In Progress): Change the openaire redmine instance to use ldap.d4science.org for the authentication: Andrea Dell'Amico
06:28 PM D4Science Infrastructure Task #3262: Change the ldap authentication for the d4science subversion repository: Also moved all the gcore/gcube repositories.
The last one to be handled is RedBox.
Andrea Dell'Amico
05:18 PM D4Science Infrastructure Task #3262 (In Progress): Change the ldap authentication for the d4science subversion repository: The D-Net subversion instance now authenticates against ldap.d4science.org.
I'm waiting for the confirmation of the... Andrea Dell'Amico
05:00 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Manuele Simi wrote:
> Andrea Dell'Amico wrote:
> > Done. Can you check?
>
> Thanks. I don't have chance to check... Andrea Dell'Amico
04:44 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Andrea Dell'Amico wrote:
> Done. Can you check?
Thanks. I don't have chance to check the node right now. I will d... Manuele Simi
04:41 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Done. Can you check?
Andrea Dell'Amico
04:07 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: (sorry, wrong ticket).
I'm going to reinstall the services right now.
Andrea Dell'Amico
03:41 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: I manually added those jars for the reasons I explained few comments earlier.
Anyway, @andrea.dellamico@isti.cnr.i... Manuele Simi
02:38 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Manuele Simi wrote:
> Luca Frosini wrote:
> > The jar must be already present in smartgears, that's why it is not i... Luca Frosini
01:23 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Luca Frosini wrote:
> The jar must be already present in smartgears, that's why it is not included in resource-regis... Manuele Simi
12:55 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: The jar must be already present in smartgears, that's why it is not included in resource-registry.
How old is the sm... Luca Frosini
03:36 PM D4Science Infrastructure Task #12118 (Closed): MongoDB: upgrade production cluster to version 3.4: The upgrade will be done in the following way:
* Upgrade secondary members of the replica set;
* Step down the re... Roberto Cirillo
03:33 PM D4Science Infrastructure Task #12117 (Closed): MongoDB: upgrade production cluster to version 3.2: The upgrade will be done in the following way:
* Upgrade secondary members of the replica set;
* Step down the re... Roberto Cirillo
03:25 PM D4Science Infrastructure Upgrade #12116: D4Science Root VO upgrade to gCube 4.12: **HostingNode**
*WHN to upgrade*
* **POSTPONED** catalogue-ws.d4science.org
* **(CNR) DONE** all the instanc... Roberto Cirillo
03:02 PM D4Science Infrastructure Upgrade #12116 (Completed): D4Science Root VO upgrade to gCube 4.12: Roberto Cirillo
02:44 PM D4Science Infrastructure Support #12115: User Management and wrong Acceptance Manager details: Just to showcase what I was reporting ... please find the attached images. Leonardo Candela
02:34 PM D4Science Infrastructure Support #12115: User Management and wrong Acceptance Manager details: I do not want to enter into any technical discussion here, since the current information is completely misleading a... Leonardo Candela
12:37 PM D4Science Infrastructure Support #12115 (Feedback): User Management and wrong Acceptance Manager details: Either we don't show the value or I don't see any other option. Unfortunately Liferay has no support for user auto r... Massimiliano Assante
12:30 PM D4Science Infrastructure Support #12115 (Closed): User Management and wrong Acceptance Manager details: The information reported in the last column of the user management portlet is really misleading.
Dunno where this... Leonardo Candela
01:33 PM D4Science Infrastructure Docker Image #12035 (Closed): Please deploy a Docker container with the "out of the box" LimeSurvey community version: This is excellent news! Thanks everyone Massimiliano Assante
01:27 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: We seem to have been able to solve the issue with the mail sending capability: my colleague Claudio has set up a dedi... Maggie Hellström
12:35 PM D4Science Infrastructure Task #11732 (Closed): Please install apa6 CTAN package on ShareLaTex: Luca Frosini
12:34 PM D4Science Infrastructure Task #11732: Please install apa6 CTAN package on ShareLaTex: It seems not working as I expected.
Just adding
~~~
\usepackage{apacite}
~~~
The compilation provides a lot... Luca Frosini
10:41 AM D4Science Infrastructure Upgrade #12112 (Planned): D4Science Preprod Gateway upgrade to gCube 4.12.0: Massimiliano Assante
10:39 AM D4Science Infrastructure Upgrade #12112 (Completed): D4Science Preprod Gateway upgrade to gCube 4.12.0: Massimiliano Assante
10:41 AM D4Science Infrastructure Upgrade #12113 (Completed): D4Science Gateway upgrade to gCube 4.12.0: Massimiliano Assante

Jul 04, 2018

06:41 PM D4Science Infrastructure Task #11978 (Closed): Add one DNS resolver in each of the GARR regions: Andrea Dell'Amico
02:50 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Maggie Hellström wrote:
> Dear Andrea,
>
> I don't know at the moment how the LimeSurvey application inside the D... Andrea Dell'Amico
02:13 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Dear Andrea,
I don't know at the moment how the LimeSurvey application inside the Docker is configured. I have to ... Maggie Hellström
01:54 PM D4Science Infrastructure Docker Image #12035 (In Progress): Please deploy a Docker container with the "out of the box" LimeSurvey community version: Maggie Hellström wrote:
> Dear all,
>
> I've only found one technical issue so far, in that it seems that the L... Andrea Dell'Amico
01:00 PM D4Science Infrastructure Task #12110 (Closed): DataMiner - Check the version of R on the DataMiner services so that the version is 3.4 everywhere: Check the version of R on the DataMiner services so that the version is 3.4 everywhere
I noticed for example that:... Giancarlo Panichi
11:36 AM D4Science Infrastructure Task #12058: IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector: socialnetworking1.d4science.org restarted for connections to collector-parthenosvo.d4science.org Roberto Cirillo

Jul 03, 2018

05:20 PM D4Science Infrastructure Task #11732 (Feedback): Please install apa6 CTAN package on ShareLaTex: Well, I installed the full texlive distribution. Now everything packaged and latex related is installed. @luca.frosi... Andrea Dell'Amico
05:12 PM D4Science Infrastructure Task #11732 (In Progress): Please install apa6 CTAN package on ShareLaTex: Yes, but the part that I did not understand is if it's part of some other collection. There's no stand alone debian p... Andrea Dell'Amico
05:02 PM D4Science Infrastructure Task #11732: Please install apa6 CTAN package on ShareLaTex: Andrea Dell'Amico wrote:
> @luca.frosini@isti.cnr.it I forgot the details. Did we find a package to install?
@and... Luca Frosini
03:15 PM D4Science Infrastructure Task #11732: Please install apa6 CTAN package on ShareLaTex: @luca.frosini@isti.cnr.it I forgot the details. Did we find a package to install?
Andrea Dell'Amico
04:26 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Andrea Dell'Amico wrote:
> About the missing jar files, the playbook uses the ansible `maven_artifact` module to d... Manuele Simi
04:05 PM D4Science Infrastructure VM Creation #12030: Upgrade VM with Resource Registry instance: Manuele Simi wrote:
> I'm reopening this because there did exist problems on the node.
>
> Specifically, when I t... Andrea Dell'Amico
03:48 PM D4Science Infrastructure VM Creation #12030 (In Progress): Upgrade VM with Resource Registry instance: I'm reopening this because there did exist problems on the node.
Specifically, when I tried to delete contexts by ... Manuele Simi
03:14 PM D4Science Infrastructure Task #9213 (Rejected): enable calDAV authentication on D4Science Gateways: We didn't find a way to make it work reliably. Andrea Dell'Amico
03:09 PM D4Science Infrastructure Task #11944 (Closed): Add 1 GB of RAM to accounting service instances: Andrea Dell'Amico
03:09 PM D4Science Infrastructure Task #11981 (Closed): Add a ssh shell proxy on the CT1 GARR region: Done some days ago. Andrea Dell'Amico
03:01 PM D4Science Infrastructure VM Creation #11927 (Closed): Create the new ckan instance: ckan-aginfra.d4science.org: Andrea Dell'Amico
03:01 PM D4Science Infrastructure VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: @francesco.mangiacrapa@isti.cnr.it are we ready to switch?
Andrea Dell'Amico
02:59 PM D4Science Infrastructure Docker Image #12035 (Closed): Please deploy a Docker container with the "out of the box" LimeSurvey community version: I'm going to close this ticket since the deployment of the technology is done. I'm going to open a follow up ticket t... Leonardo Candela
01:59 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Dear all,
Together with my colleague Claudio, I have now successfully configured the LimeSurvey installation. As a... Maggie Hellström
12:19 PM D4Science Infrastructure Docker Image #12035 (Feedback): Please deploy a Docker container with the "out of the box" LimeSurvey community version: Andrea Dell'Amico
12:18 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Thanks for the clarifications. The application is now reachable from anywhere at https://docker-exec1.d4science.org/... Andrea Dell'Amico
10:02 AM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Thank you Andrea for all your hard work! Sorry for not replying sooner, but I see from the recent messages that the i... Maggie Hellström
08:05 AM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Andrea Dell'Amico wrote:
> Never mind, it was my fault. The application is reachable. @massimiliano.assante@isti.cnr... Massimiliano Assante
02:37 PM D4Science Infrastructure Task #12102 (Closed): Preproduction infrastructure: create an alias for enabling services: Done. Give the DNS servers some minutes to update the zones.
Andrea Dell'Amico
02:32 PM D4Science Infrastructure Task #12102 (In Progress): Preproduction infrastructure: create an alias for enabling services: Andrea Dell'Amico
11:41 AM D4Science Infrastructure Task #12102 (Closed): Preproduction infrastructure: create an alias for enabling services: The enabling services of the root-VO will be recycled from enabling services of Edison VO.
It's needed to create an... Roberto Cirillo
02:29 PM D4Science Infrastructure Task #11737 (Closed): Please setup a Nextcloud instance on D4Science: Andrea Dell'Amico
12:52 PM D4Science Infrastructure Incident #12103 (Rejected): workspace in dev: upload doesn't work anymore: We are migrating to workspace-uploader 2.0 that interacts with storagehub.
For this reason the dev environment is u... Francesco Mangiacrapa
12:29 PM D4Science Infrastructure Incident #12103 (Rejected): workspace in dev: upload doesn't work anymore: It's not possible to upload any file from my ws.
In attachment the exception found on dev portal.
Please, could yo... Roberto Cirillo

Jul 02, 2018

11:53 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Never mind, it was my fault. The application is reachable. @massimiliano.assante@isti.cnr.it the docker server is cur... Andrea Dell'Amico
07:10 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Manually fixing all the redirections I am able to reach https://docker-exec1.d4science.org/limesurvey/index.php?r=ins... Andrea Dell'Amico
06:55 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: I see that the variable is been passed to the container. The output of `docker container inspect limesurvey` reports
... Andrea Dell'Amico
06:42 PM D4Science Infrastructure Docker Image #12035 (In Progress): Please deploy a Docker container with the "out of the box" LimeSurvey community version: I'm trying to run the container giving it a different location, because the docker server is shared with other contai... Andrea Dell'Amico
05:22 PM D4Science Infrastructure Task #12087: Remove services from Edison VO: scope removed from ansible-playbook.
We should also remove the Edison key from the playbook. Roberto Cirillo
04:54 PM D4Science Infrastructure Task #12087: Remove services from Edison VO: node44.p.d4science.research-infrastructures.eu removed Roberto Cirillo
04:45 PM D4Science Infrastructure Task #12087 (In Progress): Remove services from Edison VO: On node44.p.d4science.research-infrastructures.eu (VREModeler service, not provisioned), the scope will be removed ma... Roberto Cirillo
02:32 PM D4Science Infrastructure Task #12087 (Closed): Remove services from Edison VO: It's needed to remove the Edison scope from the following services:
~~~
accounting-service1.d4science.org
accoun... Roberto Cirillo
04:44 PM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net: Andrea Dell'Amico wrote:
> I just added the hostname. The certificate will have to wait.
We are still unable to o... Andrea Dell'Amico
04:43 PM D4Science Infrastructure Task #12098 (Closed): Production Gateways PerformFISH Site creation and Theme: Massimiliano Assante
03:11 PM D4Science Infrastructure Task #12090 (Closed): Remove Edison VO scope from infrastructure-monitor: In order to dismiss the Edison VO, it's needed to remove the Edison VO from all the production and preproduction port... Roberto Cirillo
03:01 PM D4Science Infrastructure Task #11862: Dismiss EDISON Virtual Organisation and related enabling services: The services to dismiss are the following:
~~~
collector-edison.d4science.org:8080 (IS-Collector)
collector-edis... Roberto Cirillo
11:39 AM D4Science Infrastructure Task #11978: Add one DNS resolver in each of the GARR regions: The resolver at region `garr-ct1` has IP 192.168.100.39
The resolver at region `garr-pa1` has IP 192.168.101.68
Andrea Dell'Amico
10:57 AM D4Science Infrastructure Incident #12086: ssk.parthenos-project.eu disappeared: Let me ask Achille @achille.felicetti@gmail.com about this as PIN is managing the hostname Massimiliano Assante
10:38 AM D4Science Infrastructure Incident #12086 (Closed): ssk.parthenos-project.eu disappeared: The certification renewal for ssk-application.parthenos.d4science.org and ssk.parthenos-project.eu is failing becau... Andrea Dell'Amico
10:00 AM D4Science Infrastructure Upgrade #12019: D4Science Infrastructure Upgrade to gCube 4.12.0: due to changes in a related task Roberto Cirillo

Jun 29, 2018

05:47 PM D4Science Infrastructure Task #11831 (In Progress): Explore new letsencrypt clients to add wildcard certificates support: I tested the procedure on preprod1.d4science.org. Our DNS configuration is working, and I've found the correct workfl... Andrea Dell'Amico
03:13 PM D4Science Infrastructure Upgrade #12023 (Paused): /gcube/preprod upgrade to gCube 4.12: Roberto Cirillo
11:08 AM D4Science Infrastructure Upgrade #12023 (In Progress): /gcube/preprod upgrade to gCube 4.12: Roberto Cirillo
02:43 PM D4Science Infrastructure VM Creation #12053 (In Progress): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: We still need to move the hostname and the smartgears scope registration.
Andrea Dell'Amico
02:38 PM D4Science Infrastructure VM Creation #12053 (Closed): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: Francesco Mangiacrapa
10:29 AM D4Science Infrastructure Task #12058 (Paused): IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector: Roberto Cirillo
10:26 AM ISTI Open Access Feature #12070 (New): Expose and Document a richer query syntax for expressing advanced queries: It should be possible for users to specify advanced queries, i.e. queries going beyond the keyword based approach. ... Leonardo Candela
10:23 AM ISTI Open Access Feature #12069 (Closed): Envisage the possibility to select many faceted search in one shot: Once a result set is displayed and the faceted queries are reported, we should consider supporting users executing ma... Leonardo Candela
10:19 AM ISTI Open Access Feature #12068 (New): Envisage the possibility to re-order the result-set facet queries associated with a result set: Once a result set is displayed the accompanying facet queries are reported with values ordered by number of occurrenc... Leonardo Candela
10:13 AM ISTI Open Access Feature #12067 (New): Repository Item: make keywords actionable: Once an item is displayed I would suggest turning the keywords / subjects displayed into actionable elements. The exp... Leonardo Candela
10:10 AM ISTI Open Access Feature #12066 (Rejected): Reharvest People content once the new format is implemented: We contacted CNR People responsibles to get People records exposed via a richer format.
Once this will be made ava... Leonardo Candela
10:08 AM ISTI Open Access Feature #12065 (New): Add a "Cite as" facility on the single item: The splash page of the item should have a "Cite as" facility (that, among others make it possible to generate the Bib... Leonardo Candela

Jun 28, 2018

07:01 PM D4Science Infrastructure Task #11978 (In Progress): Add one DNS resolver in each of the GARR regions: The resolvers have been provisioned. Now a new resolv.conf must be deployed to the GARR VMs.
Andrea Dell'Amico
06:00 PM D4Science Infrastructure VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: The problem has been solved. Andrea Dell'Amico
02:01 PM D4Science Infrastructure VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: We've found a clash between a file that we overwrite and a newer version of that file. It's `/usr/lib/ckan/default/sr... Andrea Dell'Amico
12:35 PM D4Science Infrastructure VM Creation #12053: Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: The VM has been provisioned. If the harvesting succeeds, we can switch the hostname and the smartgears scope.
Andrea Dell'Amico
05:26 PM D4Science Infrastructure Incident #12063 (Closed): Storage Hub Recent Documents do not get updated in SoBigData.eu VRE: I Uploaded a new file at 14.30 today here: https://goo.gl/gMd8RA
However if I go on the VRE and asl for the recent... Massimiliano Assante
12:36 PM D4Science Infrastructure VM Creation #12055 (Closed): Create SOLR instance for CKAN SBD: ckan-solr.sobigdata.d4science.net: The solr instance is up and running. Andrea Dell'Amico
12:36 PM D4Science Infrastructure VM Creation #12054 (Closed): Create DB instance for CKAN SBD: ckan-pg.sobigdata.d4science.net: The VM has been provisioned, databases created.
Andrea Dell'Amico
10:42 AM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: I agree! Thanks for your support! Yannis Marketakis
10:34 AM D4Science Infrastructure Task #12058: IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector: Services restarted. Roberto Cirillo
10:14 AM D4Science Infrastructure Task #12058 (In Progress): IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector: Roberto Cirillo
09:56 AM D4Science Infrastructure Task #12058 (Closed): IS-Collector: Restart all the smartgears services with too many open connections to IS-Collector: Roberto Cirillo

Jun 27, 2018

06:18 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: OK you are still not convinced but I say that because all the threads in the logs are named "AccountingScheduledThrea... Roberto Cirillo
04:55 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: Roberto Cirillo wrote:
> There were a lot of accounting threads that were connected to the IS when the IS-Collector ... Luca Frosini
03:02 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: @luca.frosini@isti.cnr.it , @lucio.lelii@isti.cnr.it the log seems to be clear to me:
There were a lot of accountin... Roberto Cirillo
02:56 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: After the restart of the containers identified yesterday, the situation seems to be returned to more normal levels.
... Roberto Cirillo
02:08 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: I investigated the issue and Accounting seems not querying the IS continuously as @roberto.cirillo@isti.cnr.it suppos... Luca Frosini
12:48 PM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: What should I say? There is an important issue and the logs have highlighted a potential source of this problem. This... Pasquale Pagano
09:48 AM D4Science Infrastructure Task #12031: gCubeApps - IS-Collector: too many open connections: Are you agree with my analysis? if not why there are a lot of accounting exception on the log in attachment? Have you... Roberto Cirillo
05:48 PM D4Science Infrastructure VM Creation #12055 (In Progress): Create SOLR instance for CKAN SBD: ckan-solr.sobigdata.d4science.net: Tommaso Piccioli
05:47 PM D4Science Infrastructure VM Creation #12055: Create SOLR instance for CKAN SBD: ckan-solr.sobigdata.d4science.net: VM ckan-solr.sobigdata.d4science.net running, to be provisioned. Tommaso Piccioli
04:44 PM D4Science Infrastructure VM Creation #12055 (Closed): Create SOLR instance for CKAN SBD: ckan-solr.sobigdata.d4science.net: Francesco Mangiacrapa
05:47 PM D4Science Infrastructure VM Creation #12054 (In Progress): Create DB instance for CKAN SBD: ckan-pg.sobigdata.d4science.net: VM ckan-pg.sobigdata.d4science.net running, to be provisioned. Tommaso Piccioli
04:42 PM D4Science Infrastructure VM Creation #12054 (Closed): Create DB instance for CKAN SBD: ckan-pg.sobigdata.d4science.net: Francesco Mangiacrapa
05:46 PM D4Science Infrastructure VM Creation #12053 (In Progress): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: VM ckan.sobigdata.d4science.net running, to be provisioned. Tommaso Piccioli
04:34 PM D4Science Infrastructure VM Creation #12053 (Closed): Create new CKAN instance for SBD catalogue: ckan.sobigdata.d4science.net: Francesco Mangiacrapa
04:57 PM StocksAndFisheriesKB Bug #12036 (Closed): Error while updating GRSF records: I'm going to close this ticket. We will reopen a new one if it happens again. Thank a lot @marketak@ics.forth.gr Luca Frosini
03:31 PM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: I confirm that I managed to update the problematic records without any issues Yannis Marketakis
09:31 AM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: I think that it is hard to reproduce the same problem.
It only appeared within a 5-minute window during the update ... Yannis Marketakis
04:56 PM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: Thanks a lot @marketak@ics.forth.gr Luca Frosini
03:30 PM StocksAndFisheriesKB Bug #12040 (Closed): Error while publishing GRSF record: After increasing the TIMEOUT I managed to publish the record normally.
Thanks! Yannis Marketakis
02:48 PM StocksAndFisheriesKB Bug #12040 (Feedback): Error while publishing GRSF record: @marketak@ics.forth.gr you can restart the process as you wish Luca Frosini
02:39 PM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: The service has been upgraded, now it is up and running. Roberto Cirillo
02:14 PM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: @francesco.mangiacrapa@isti.cnr.it implemented a workaround for the timeout. I tested it in dev and seems working.
... Luca Frosini
11:22 AM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: @francesco.mangiacrapa@isti.cnr.it and me investigated the problem.
My request arrived at '2018-06-27 10:17:06,174... Luca Frosini
10:19 AM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: I get a SocketTimeoutException from CKAN. @francesco.mangiacrapa@isti.cnr.it any ideas?
~~~
eu.trentorise.ope... Luca Frosini
10:16 AM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: I'm going to publish it Luca Frosini
09:25 AM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: Unfortunately, the problem persists.
You could try to publish it now (that I have removed it) to see the error. Yannis Marketakis
08:54 AM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: Hi Luca,
Indeed, even if when I tried to publish it, I received the error message that appears in the description... Yannis Marketakis
04:13 PM D4Science Infrastructure Upgrade #12023 (Planned): /gcube/preprod upgrade to gCube 4.12: Roberto Cirillo
04:13 PM D4Science Infrastructure Upgrade #12019: D4Science Infrastructure Upgrade to gCube 4.12.0: due to changes in a related task Roberto Cirillo
02:23 PM D4Science Infrastructure Support #12032 (Closed): ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: The services have been restarted. Now I see 0 opened connections from 90.147.166.112. I'm going to close this ticket. Roberto Cirillo
02:05 PM D4Science Infrastructure Support #12032 (In Progress): ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: OK. I'm going to restart the services one at a time Roberto Cirillo
12:49 PM D4Science Infrastructure Support #12032: ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: Go on. One at a time, you can restart each one.
If the connections problem persists, we can even restart all the d... Andrea Dell'Amico
12:34 PM D4Science Infrastructure Support #12032 (Feedback): ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: I've verified the logs on all the dataminer instances with private ip. I see the same exceptions found on ckan-bb1, ... Roberto Cirillo
11:24 AM D4Science Infrastructure Support #12034 (Closed): ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: The service has been restarted with log level set to DEBUG/TRACE. Now, the high number of opened connections to node6... Roberto Cirillo
05:44 AM D4Science Infrastructure VM Creation #12030 (Closed): Upgrade VM with Resource Registry instance: It works like a charm. Thanks! Manuele Simi

Jun 26, 2018

06:23 PM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: Here you can find the record
http://data.d4science.org/ctlg/GRSF_Admin/a0e90de7-0169-3ed1-9c12-135952b244af Luca Frosini
06:22 PM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: Please note that the creation/update of attached resources (the files) is an asynchronous task, so even you serialize... Luca Frosini
06:13 PM StocksAndFisheriesKB Bug #12036 (Paused): Error while updating GRSF records: Maybe this issue is related with the HW resources which during massive submission are very stressed.
I'm pausing the... Luca Frosini
03:05 PM StocksAndFisheriesKB Bug #12036 (In Progress): Error while updating GRSF records: @marketak@ics.forth.gr told me that it works on retrying. Maybe this is related to the provided hardware resources. Luca Frosini
02:37 PM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: Attached you will find an indicative record that had failed.
FYI: I managed to update ~ 2000 GRSF records and ~ 10... Yannis Marketakis
02:23 PM StocksAndFisheriesKB Bug #12036: Error while updating GRSF records: Can you please provide me the json of the records you want to update?
Can you also provide me your token (via anot... Luca Frosini
12:11 PM StocksAndFisheriesKB Bug #12036 (Closed): Error while updating GRSF records: The following error occurred while updating several GRSF records (around 100 of them failed)... Yannis Marketakis
06:09 PM StocksAndFisheriesKB Bug #12040: Error while publishing GRSF record: Hi Yannis,
trying to create the record I get the following error:
~~~
2018-06-26 17:55:55,829 [catalina-exec-... Luca Frosini
03:12 PM StocksAndFisheriesKB Bug #12040 (In Progress): Error while publishing GRSF record: Luca Frosini
12:58 PM StocksAndFisheriesKB Bug #12040 (Closed): Error while publishing GRSF record: An error occurred while publishing the following GRSF record.
The JSON export of the record as well as the publish... Yannis Marketakis
06:09 PM D4Science Infrastructure Task #12031 (Feedback): gCubeApps - IS-Collector: too many open connections: Looking the code, I dind't find any reason why accounting should open so many connections but I was looking the lates... Luca Frosini
04:22 PM D4Science Infrastructure Task #12031 (In Progress): gCubeApps - IS-Collector: too many open connections: Luca Frosini
04:01 PM D4Science Infrastructure Task #12031 (Feedback): gCubeApps - IS-Collector: too many open connections: I think, finally, I've localize the problem.
Yesterday, at 6 p.m. I've restarted the IS-Collector and Registry se... Roberto Cirillo
10:12 AM D4Science Infrastructure Task #12031 (In Progress): gCubeApps - IS-Collector: too many open connections: Roberto Cirillo
10:10 AM D4Science Infrastructure Task #12031 (Closed): gCubeApps - IS-Collector: too many open connections: There are too many open connections on IS-Collector of gCubeApps VO hosted on:
~~~
node66.p.d4science.research-in... Roberto Cirillo
06:08 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support: I'll try to use _acme-challenge.d4science.org as CNAME of _acme-challenge.d4science.net. Andrea Dell'Amico
05:44 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support: It seems that we can exploit a feature that do not force us to move the `d4science.org` domain before starting the au... Andrea Dell'Amico
06:04 PM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: From my point of view, you can restart it Luca Frosini
05:54 PM D4Science Infrastructure Support #12034 (Feedback): ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: @luca.frosini@isti.cnr.it could I restart the container or do you want to check the behavior of this host?
I think t... Roberto Cirillo
03:22 PM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: No. I tested it and it worked in the past, but I don't remember the specific smartgears version and the logback libra... Andrea Dell'Amico
03:10 PM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: @andrea.dellamico@isti.cnr.it I guess the logback reloading doesn't work. I've set the log to DEBUG three hours ago b... Roberto Cirillo
12:09 PM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: Andrea Dell'Amico wrote:
> The first line of the `logback.xml` file that automatically reload itself is:
>
> ~~~
... Roberto Cirillo
11:52 AM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: The first line of the `logback.xml` file that automatically reload itself is:
~~~
<configuration scan="true" debu... Andrea Dell'Amico
11:47 AM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: In this host there is the smartgears distribution 4.11 but I don't remember if the logback version released in 4.11 a... Roberto Cirillo
11:35 AM D4Science Infrastructure Support #12034: ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: You should ask @francesco.mangiacrapa@isti.cnr.it as I only install the CKAN nodes. The smartgears part is separate f... Andrea Dell'Amico
11:32 AM D4Science Infrastructure Support #12034 (In Progress): ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: I see a lot of opened connection to node66.p, sometimes over 50. This is not normal.
From logs (INFO level) I don't ... Roberto Cirillo
11:21 AM D4Science Infrastructure Support #12034 (Closed): ckan-bb1.d4science.org: too many opened connections to node66.p.d4science: I see a lot of concurred opened connections from ckan-bb1.d4science.org to node66.p.d4science.research-infrastructure... Roberto Cirillo
05:50 PM D4Science Infrastructure Support #12033 (Closed): rstudio2.d4science.org: too many opened connetions to node66.p.d4science: After the restart I see again 0 opened connections. I'm going to close this ticket Roberto Cirillo
11:00 AM D4Science Infrastructure Support #12033: rstudio2.d4science.org: too many opened connetions to node66.p.d4science: For the moment, after the restart I see 0 opened connections Roberto Cirillo
10:42 AM D4Science Infrastructure Support #12033 (In Progress): rstudio2.d4science.org: too many opened connetions to node66.p.d4science: I'm going to decrease the log level in order to analyze the logs
Roberto Cirillo
10:36 AM D4Science Infrastructure Support #12033 (Closed): rstudio2.d4science.org: too many opened connetions to node66.p.d4science: I see a lot of concurred opened connections from rstudio2.d4science.org.
This host should be monitored.
Roberto Cirillo
05:17 PM D4Science Infrastructure VM Creation #12030 (Feedback): Upgrade VM with Resource Registry instance: The VM is now running smartgears version `2.2.0-4.12.0-162179` and the latest version of the resource registry.
Andrea Dell'Amico
05:08 PM D4Science Infrastructure VM Creation #12030 (In Progress): Upgrade VM with Resource Registry instance: Andrea Dell'Amico
05:03 AM D4Science Infrastructure VM Creation #12030 (Closed): Upgrade VM with Resource Registry instance: The container and the RR instance hosted on manuele-registry.dev.d4science.org. I tried to replace manually the RR in... Manuele Simi
05:01 PM D4Science Infrastructure Task #11982 (Closed): Increase RAM on ckan-grsf-admin2.d4science.org: Andrea Dell'Amico
05:00 PM D4Science Infrastructure Task #11982 (Feedback): Increase RAM on ckan-grsf-admin2.d4science.org: The VM is now running with 5GB of RAM Andrea Dell'Amico
04:59 PM D4Science Infrastructure Task #11982 (In Progress): Increase RAM on ckan-grsf-admin2.d4science.org: Andrea Dell'Amico
04:36 PM D4Science Infrastructure Task #11982: Increase RAM on ckan-grsf-admin2.d4science.org: I'm going to shutdown and start the instance right now.
Andrea Dell'Amico
03:12 PM D4Science Infrastructure Task #11982: Increase RAM on ckan-grsf-admin2.d4science.org: Please let me know when the CKAN instance has been restarted so I can investigate #12040 Luca Frosini
03:02 PM D4Science Infrastructure Task #11982: Increase RAM on ckan-grsf-admin2.d4science.org: @marketak@ics.forth.gr confirmed me that the publication is over. You can stop the VM. Luca Frosini
02:44 PM D4Science Infrastructure Task #11982: Increase RAM on ckan-grsf-admin2.d4science.org: Right now the smartgears instance is not able to start because it cannot allocate enough RAM. Is the publication acti... Andrea Dell'Amico
04:40 PM D4Science Infrastructure Task #12044 (Closed): Remove the component storagehub-client-wrapper (with groupid org.gcube.portal') from Nexus: Done Roberto Cirillo
04:31 PM D4Science Infrastructure Task #12044 (In Progress): Remove the component storagehub-client-wrapper (with groupid org.gcube.portal') from Nexus: Roberto Cirillo
03:33 PM D4Science Infrastructure Task #12044 (Closed): Remove the component storagehub-client-wrapper (with groupid org.gcube.portal') from Nexus: I'm going to change the groupid (from 'org.gcube.portal' to 'org.gcube.common') to the component 'storagehub-client-w... Francesco Mangiacrapa
03:23 PM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: Added the nagios monitoring. Andrea Dell'Amico
02:33 PM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: apache did not restart correctly last night, as often happens (we have a nagios handler that fix the problem, but thi... Andrea Dell'Amico
02:28 PM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: Just now by using the link https://ckan-aginfra.d4science.org/ I get a 502 Bad Gateway nginx. Could you check? Thanks Francesco Mangiacrapa
02:53 PM D4Science Infrastructure Incident #12043 (Rejected): ckan-grsf-admin2: more memory is needed: Duplicate of #11982, waiting for feedback from @francesco.mangiacrapa@isti.cnr.it Andrea Dell'Amico
02:48 PM D4Science Infrastructure Incident #12043 (Rejected): ckan-grsf-admin2: more memory is needed: The smartgears container has been killed by system this night at 3 a.m.
I've tried to restart the container but th... Roberto Cirillo
02:19 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: I was asking because nothing was specified in the request, but the container image runs a mysql instance and saves th... Andrea Dell'Amico
12:50 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Well, to me this is a bit complicated to understand how you want to:
* deal with the LimeSurvey installation as such... Maggie Hellström
12:34 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Andrea Dell'Amico wrote:
> Do we need any persistent storage?
Of course we do, the created surveys must stay
Massimiliano Assante
12:33 PM D4Science Infrastructure Docker Image #12035: Please deploy a Docker container with the "out of the box" LimeSurvey community version: Do we need any persistent storage?
Andrea Dell'Amico
11:41 AM D4Science Infrastructure Docker Image #12035 (Closed): Please deploy a Docker container with the "out of the box" LimeSurvey community version: In the context of ENVRIPlus Project we would need (possibly bu the end of this week) to deploy a LimeSurvey communit... Massimiliano Assante
12:59 PM StocksAndFisheriesKB Task #11973 (Closed): Please start the submission of GRSF from Knowledge base.: The corresponding tickets are: #12036 and #12040 Yannis Marketakis
11:59 AM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: We have managed to published GRSF records.
However, we faced a few errors. More specifically, (a) a GRSF record cou... Yannis Marketakis
12:12 PM D4Science Infrastructure Task #10187 (Closed): Enhance SAI: I consider this ticket as concluded, because the project copy will have to be re-evaluated according to the transitio... Giancarlo Panichi
11:41 AM D4Science Infrastructure Support #12032: ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: Andrea Dell'Amico wrote:
> It's the IP address that's used by the hosts without a public IP. So there's one (or more... Roberto Cirillo
11:16 AM D4Science Infrastructure Support #12032: ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: It's the IP address that's used by the hosts without a public IP. So there's one (or more than one) of the private IP... Andrea Dell'Amico
10:16 AM D4Science Infrastructure Support #12032 (Closed): ip-90-147-166-112.ct1.garrservices.it: too many opened connection to node66.p.d4science: Who is this host?
I'm not able to access to this host: ip-90-147-166-112.ct1.garrservices.it
Please could you gi... Roberto Cirillo

Jun 25, 2018

07:09 PM D4Science Infrastructure VM Creation #11927 (Feedback): Create the new ckan instance: ckan-aginfra.d4science.org: The service is running. There are no customisations yet (and no valid x.509 certificate...)
Andrea Dell'Amico
02:09 PM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: Provisioning is in progress
Andrea Dell'Amico
06:27 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support: raising the priority as we would need to deliver a new gateway by the end of June (https://performfish.d4science.org) Massimiliano Assante
04:19 PM D4Science Infrastructure Upgrade #12023: /gcube/preprod upgrade to gCube 4.12: **Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws-t.pre.d4science.org
* **(CNR) DONE** datamine... Roberto Cirillo
03:41 PM D4Science Infrastructure Upgrade #12023 (Completed): /gcube/preprod upgrade to gCube 4.12: Roberto Cirillo
04:13 PM D4Science Infrastructure Task #12018 (Feedback): Please update OrientDB ansible script: The download URL is unchanged, only the compression format is different. I changed the playbook and run it, version 2... Andrea Dell'Amico
04:03 PM D4Science Infrastructure Task #12018 (In Progress): Please update OrientDB ansible script: Andrea Dell'Amico
02:38 PM D4Science Infrastructure Task #12018 (Closed): Please update OrientDB ansible script: We need to update the URL where downloading the server. Which is something like this:
https://bit.ly/orientdb-ce-2... Luca Frosini
03:54 PM D4Science Infrastructure Incident #12015 (Closed): News Feed search function returns result up to mid April 2018: News Feed search function is back "on date" Massimiliano Assante
03:22 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: The smart-executor was restarted. Please close the ticket at your convenience Luca Frosini
03:22 PM D4Science Infrastructure Incident #12015 (In Progress): News Feed search function returns result up to mid April 2018: Luca Frosini
03:18 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: I was able to recover the situation. Luca Frosini
02:50 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: Ok sorry, i still don't get why social-indexer.d4science.org container would try "dialoguing" with orientdb though. Massimiliano Assante
02:47 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: Massimiliano Assante wrote:
> @luca.frosini@isti.cnr.it there must be a mistake, you set this ticket as Blocked by D... Luca Frosini
02:46 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: The 15th June instances 2 and 3 were restarted and this causes known issues on replication.
I stopped those instan... Luca Frosini
02:45 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: @luca.frosini@isti.cnr.it there must be a mistake, you set this ticket as Blocked by D4Science Infrastructure - Task ... Massimiliano Assante
12:15 PM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: The smart-executor service is up and running and all the social-indexer plugin resources are correctly published on I... Roberto Cirillo
11:47 AM D4Science Infrastructure Incident #12015: News Feed search function returns result up to mid April 2018: I was able to retrieve results until Mid April 2018 not March as previously stated Massimiliano Assante
11:44 AM D4Science Infrastructure Incident #12015 (Closed): News Feed search function returns result up to mid April 2018: It seems that News Feed search function returns result up to mid February 2018, after that no results are returned. I... Massimiliano Assante
03:04 PM D4Science Infrastructure Upgrade #12019 (Completed): D4Science Infrastructure Upgrade to gCube 4.12.0: Roberto Cirillo
02:23 PM D4Science Infrastructure VM Creation #11729 (Closed): VM for mongo: sorry for the long time taken before checking. Everything works fine Miriam Baglioni

Jun 21, 2018

10:11 AM D4Science Infrastructure Task #12008 (Rejected): grsf-publisher deployed on gcube-staging repo doesn't work: The latest grsf-publisher service version (grsf-publisher-ws-1.6.0-4.12.0-169302) deployed on staging repo doesn't wo... Roberto Cirillo
10:03 AM D4Science Infrastructure Task #12007 (New): Storage-MongoDB: Disable nagios alert when a backup is performed: If a backup is performed the nagios alert related to mongo5 instance should be disabled otherwise I cannot understand... Roberto Cirillo
09:00 AM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: Thanks for the update Luca,
I'll start publishing right away. Yannis Marketakis

Jun 20, 2018

05:23 PM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: The war created by the building system differs from local version I used to test the changes.
The war contained wro... Luca Frosini
02:59 PM D4Science Infrastructure Incident #11988 (Closed): Copy doesn't work prepoerly: The test has been passed. I'm going to close this ticket. Thanks. Roberto Cirillo
02:54 PM D4Science Infrastructure Incident #11988: Copy doesn't work prepoerly: the patch has been deployed please test the workspace https://services.d4science.org/group/d4science-services-gateway... Massimiliano Assante
11:14 AM D4Science Infrastructure Incident #11988: Copy doesn't work prepoerly: Thanks @francesco.mangiacrapa@isti.cnr.it
Please @massimiliano.assante@isti.cnr.it could you deploy the new jar o... Roberto Cirillo
02:56 PM D4Science Infrastructure Upgrade #11999 (Completed): Deploy Home Library patch on Infra Gateways for fixing Incident 11988: Massimiliano Assante
02:38 PM D4Science Infrastructure Upgrade #11999 (In Progress): Deploy Home Library patch on Infra Gateways for fixing Incident 11988: Massimiliano Assante
02:35 PM D4Science Infrastructure Upgrade #11999 (Completed): Deploy Home Library patch on Infra Gateways for fixing Incident 11988: Massimiliano Assante
02:42 PM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net: How long we still have to wait? We need this soon @andrea.dellamico@isti.cnr.it Massimiliano Assante
09:47 AM D4Science Infrastructure VM Creation #11954: VM to host the GRSF-services-updater service: The webApps (there are two) have been uploaded on SVN.
* https://svn.d4science-ii.research-infrastructures.eu/gcub... Yannis Marketakis

Jun 19, 2018

06:24 PM D4Science Infrastructure Incident #11988: Copy doesn't work prepoerly: Roberto Cirillo wrote:
> Please @francesco.mangiacrapa@isti.cnr.it could you add this case on workspace test plan ?... Francesco Mangiacrapa
05:56 PM D4Science Infrastructure Incident #11988: Copy doesn't work prepoerly: Please @francesco.mangiacrapa@isti.cnr.it could you add this case on workspace test plan ? Roberto Cirillo
05:36 PM D4Science Infrastructure Incident #11988: Copy doesn't work prepoerly: The problem has been solved, a build against release 4.12 is under execution.
the new configuration is org.gcube.com... Lucio Lelii
02:37 PM D4Science Infrastructure Incident #11988 (Feedback): Copy doesn't work prepoerly: I've performed some tests on porduction workspace and I can confirm that the storage id of the copied file is the sam... Roberto Cirillo
12:54 PM D4Science Infrastructure Incident #11988 (In Progress): Copy doesn't work prepoerly: Roberto Cirillo
12:49 PM D4Science Infrastructure Incident #11988 (Closed): Copy doesn't work prepoerly: In order to test the new copy implementation I have performed some tests by our workspace on copy operation and I've ... Roberto Cirillo
01:23 PM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: Attached you will find some indicative examples
Yannis Marketakis
12:28 PM StocksAndFisheriesKB Task #11973 (In Progress): Please start the submission of GRSF from Knowledge base.: @marketak@ics.forth.gr @minadakn@ics.forth.gr I noticed some null pointer exception on Stock creation and I have to i... Luca Frosini
10:55 AM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: Thanks, Luca and Fransesco,
Just started publishing GRSF records. Yannis Marketakis
10:46 AM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: The GRSF service was updated to the latest version available (see at: #11970)
You can start publishing (a few GRSF) ... Francesco Mangiacrapa
09:08 AM StocksAndFisheriesKB Task #11973: Please start the submission of GRSF from Knowledge base.: We are ready to start publishing records whenever ready. I see that for the time being GRSF-Admin contains all the le... Yannis Marketakis
12:15 PM D4Science Infrastructure Task #11964 (Closed): MongoDB: upgrade dev cluster to version 3.4: mongodb-org version 3.4 on mongo-d-vol.d4science.org, all OK. Tommaso Piccioli
11:26 AM D4Science Infrastructure Task #11964 (In Progress): MongoDB: upgrade dev cluster to version 3.4: Roberto Cirillo
09:57 AM D4Science Infrastructure Task #11982 (Closed): Increase RAM on ckan-grsf-admin2.d4science.org: As discussed by mail, it's needed to add 1 GB to the following VM:
~~~
ckan-grsf-admin2.d4science.org
~~~
Ple... Roberto Cirillo

Jun 18, 2018

07:52 PM D4Science Infrastructure Task #11981 (Closed): Add a ssh shell proxy on the CT1 GARR region: We are using the dataminer load balancer as proxy, but that's not correct. Move the configuration on a dedicated VM. Andrea Dell'Amico
07:49 PM D4Science Infrastructure Task #11980 (Closed): Add the involvement filter plugin to the d4science redmine instance: The plugin is http://www.redmine.org/plugins/involvement_filter Andrea Dell'Amico
07:45 PM D4Science Infrastructure Task #11978 (Closed): Add one DNS resolver in each of the GARR regions: The GARR DNS servers sometimes time out.
Andrea Dell'Amico
07:42 PM D4Science Infrastructure Task #11976: New load balancer for the tagme service: Evaluate the rate limiting configuration to prevent the abuse of the Tagme APIs.
Andrea Dell'Amico
07:37 PM D4Science Infrastructure Task #11976 (Closed): New load balancer for the tagme service: Use a new instance to work around the certificates issue. Andrea Dell'Amico
07:39 PM D4Science Infrastructure VM Creation #11975: New TAGME instance at GARR: Enable JMX by default, and eventually enable the Prometheus JMX exporter. Andrea Dell'Amico
07:36 PM D4Science Infrastructure VM Creation #11975 (Closed): New TAGME instance at GARR: We need a bigger server, maybe behind a load balancer. Andrea Dell'Amico
07:38 PM D4Science Infrastructure Task #11977 (Closed): Make the tagme service more reliable.: * Add (bigger) instances
* Put them behind a load balancer
* Rate limit the requests on the load balancer Andrea Dell'Amico
05:35 PM D4Science Infrastructure Upgrade #11970 (Completed): Please update GRSF service in production with latest versions available: Done Roberto Cirillo
05:31 PM D4Science Infrastructure Upgrade #11970 (In Progress): Please update GRSF service in production with latest versions available: Roberto Cirillo
05:30 PM D4Science Infrastructure Upgrade #11970 (Planned): Please update GRSF service in production with latest versions available: I'm going to install the following version:
~~~
<groupId>org.gcube.data-catalogue</groupId>
<artifactId>grsf-p... Roberto Cirillo
04:37 PM D4Science Infrastructure Upgrade #11970 (Completed): Please update GRSF service in production with latest versions available: The artefact is this grsf-publisher-ws.1.6.0-4-12.0 (latest it should be sufficient).
The artefact has been compil... Luca Frosini
05:30 PM D4Science Infrastructure VM Creation #11954: VM to host the GRSF-services-updater service: Do we have a way to install and configure it? we usually completely deploy and configure the services hosted here.
Andrea Dell'Amico
05:15 PM StocksAndFisheriesKB Task #11973 (Closed): Please start the submission of GRSF from Knowledge base.: @marketak@ics.forth.gr @minadakn@ics.forth.gr my colleague @roberto.cirillo@isti.cnr.it is going to deploy in product... Luca Frosini
02:41 PM D4Science Infrastructure Task #11964 (Closed): MongoDB: upgrade dev cluster to version 3.4: MongoDB dev cluster upgraded to version 3.4 , all OK. Tommaso Piccioli
10:24 AM D4Science Infrastructure Task #11964 (Closed): MongoDB: upgrade dev cluster to version 3.4: The upgrade will be done in the following way:
* Upgrade secondary members of the replica set.
* Step down the re... Roberto Cirillo
10:44 AM D4Science Infrastructure Task #9122: Upgrade MongoDB to 3.4 version: due to changes in a related task Roberto Cirillo
10:19 AM D4Science Infrastructure Task #9123 (Closed): MongoDB: upgrade dev cluster to version 3.2: The storage library works fine with 3.2 version. I'm going to close this ticket and open a new one for upgrading the ... Roberto Cirillo

Jun 16, 2018

10:02 AM D4Science Infrastructure Support #11560 (Closed): Remove old CDH 5.9 Cluster: VM removed, volumes removed, IP removed. Tommaso Piccioli

Jun 15, 2018

05:26 PM D4Science Infrastructure Task #9123 (In Progress): MongoDB: upgrade dev cluster to version 3.2: mongodb-org 3.2.20 installed on the dev cluster Tommaso Piccioli

Jun 14, 2018

05:53 PM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: hostname and IP address are going to be ckan-aginfra.d4science.org 146.48.122.210
Andrea Dell'Amico
05:52 PM D4Science Infrastructure VM Creation #11927 (In Progress): Create the new ckan instance: ckan-aginfra.d4science.org: Andrea Dell'Amico
08:41 AM D4Science Infrastructure VM Creation #11954 (Closed): VM to host the GRSF-services-updater service: The service is responsible for: (a) updating GRSF records (through the GRSF_Admin VRE management portal) and (b) expo... Yannis Marketakis

Jun 13, 2018

07:15 PM D4Science Infrastructure Task #11924 (Closed): Dismiss https://ckan-eosc.d4science.org: Done. Andrea Dell'Amico
07:07 PM D4Science Infrastructure Task #11924 (In Progress): Dismiss https://ckan-eosc.d4science.org: Andrea Dell'Amico
06:55 PM D4Science Infrastructure Task #11944 (Feedback): Add 1 GB of RAM to accounting service instances: Done. Now the three servers run with 3GB of RAM each. Andrea Dell'Amico
06:23 PM D4Science Infrastructure Task #11944 (In Progress): Add 1 GB of RAM to accounting service instances: I'm doing it, one at a time. Andrea Dell'Amico
05:24 PM D4Science Infrastructure Task #11944: Add 1 GB of RAM to accounting service instances: yes, please Luca Frosini
05:09 PM D4Science Infrastructure Task #11944: Add 1 GB of RAM to accounting service instances: accounting-service3.d4science.org only had a non working tomcat, now it's on line.
@luca.frosini@isti.cnr.it we add ... Andrea Dell'Amico
11:40 AM D4Science Infrastructure Task #11944: Add 1 GB of RAM to accounting service instances: sdi.d4science.org tomcat was restarted this morning, before the restart there was a memory warning on nagios.
http... Tommaso Piccioli
11:32 AM D4Science Infrastructure Task #11944: Add 1 GB of RAM to accounting service instances: OK I agree for adding 1 GB of RAM for each instance.
I don't know why accounting-service3 is down, maybe @luca.frosi... Roberto Cirillo
11:20 AM D4Science Infrastructure Task #11944: Add 1 GB of RAM to accounting service instances: * It would be better adding 1 GB of RAM each, I've always seen heap memory problems with smartgears nodes with less... Andrea Dell'Amico
10:33 AM D4Science Infrastructure Task #11944 (Feedback): Add 1 GB of RAM to accounting service instances: Roberto Cirillo
10:33 AM D4Science Infrastructure Task #11944 (In Progress): Add 1 GB of RAM to accounting service instances: I don't know if it's better to decrease the heap size or to increase the RAM. At this moment both the instances are s... Roberto Cirillo
09:59 AM D4Science Infrastructure Task #11944 (Closed): Add 1 GB of RAM to accounting service instances: The accounting instances have the following (default) heap limits:
~~~
-Xms2048m -Xmx2048m
~~~
but the VM hav... Roberto Cirillo
05:51 PM D4Science Infrastructure Upgrade #11952 (Completed): Deployment of Data Analytics Visualization Portlets in Food Security VRE (Infra Gateways): The portlets are available at https://aginfra.d4science.org/group/foodsecurity/data-analytics-visualization to the VR... Massimiliano Assante
05:41 PM D4Science Infrastructure Upgrade #11952 (In Progress): Deployment of Data Analytics Visualization Portlets in Food Security VRE (Infra Gateways): Massimiliano Assante
05:40 PM D4Science Infrastructure Upgrade #11952 (Completed): Deployment of Data Analytics Visualization Portlets in Food Security VRE (Infra Gateways): In the context of AGINFRA+ Project these two portlets should be deployed on production:
* data-analytics-visualiza... Massimiliano Assante
05:42 PM D4Science Infrastructure Support #11560: Remove old CDH 5.9 Cluster: @tommaso.piccioli@isti.cnr.it, @sandro.labruzzo@isti.cnr.it just moved all the data from the Hortonworks cluster. The... Andrea Dell'Amico
05:38 PM D4Science Infrastructure Incident #11947 (Closed): Algorithms are not being installed in the RPrototypingLab: Giancarlo Panichi
05:38 PM D4Science Infrastructure Incident #11947 (Resolved): Algorithms are not being installed in the RPrototypingLab: I confirm that dm-pool-manager only acts on the SVN so it does not create conflicts.
Since the problem is solved I c... Giancarlo Panichi
05:03 PM D4Science Infrastructure Incident #11947: Algorithms are not being installed in the RPrototypingLab: Gianpaolo Coro wrote:
> OK, I confirm the algorithms work now.
>
> As for the issue: The dm-pool-manager only ac... Andrea Dell'Amico
04:59 PM D4Science Infrastructure Incident #11947: Algorithms are not being installed in the RPrototypingLab: OK, I confirm the algorithms work now.
As for the issue: The dm-pool-manager only acts on the SVN, I know. The al... Gianpaolo Coro
04:48 PM D4Science Infrastructure Incident #11947 (Feedback): Algorithms are not being installed in the RPrototypingLab: Andrea Dell'Amico
04:48 PM D4Science Infrastructure Incident #11947 (In Progress): Algorithms are not being installed in the RPrototypingLab: Gianpaolo Coro wrote:
> That's strange because in the RPrototypingLab SVN commit is only managed by the Pool Manager... Andrea Dell'Amico
04:40 PM D4Science Infrastructure Incident #11947: Algorithms are not being installed in the RPrototypingLab: That's strange because in the RPrototypingLab SVN commit is only managed by the Pool Manager and locally only the cro... Gianpaolo Coro
04:25 PM D4Science Infrastructure Incident #11947: Algorithms are not being installed in the RPrototypingLab: Also, you can check `/var/log/syslog` to see if the script is running (it's a cron job, so if it's not run there are ... Andrea Dell'Amico
04:23 PM D4Science Infrastructure Incident #11947: Algorithms are not being installed in the RPrototypingLab: On dataminer0-proto.d4science.org I see:
~~~
$ svn update
Updating '.':
Skipped 'software/OPEN_MESH_RECONSTRUCT... Andrea Dell'Amico
03:16 PM D4Science Infrastructure Incident #11947 (Closed): Algorithms are not being installed in the RPrototypingLab: I have added two algorithms through the SAI in the RPrototypingLab. The algorithms are correctly uploaded on the SVN ... Gianpaolo Coro
11:19 AM D4Science Infrastructure VM Creation #11927: Create the new ckan instance: ckan-aginfra.d4science.org: any news? Francesco Mangiacrapa
10:42 AM D4Science Infrastructure Task #11938 (Closed): Enable statistical.manager on SVN: It works. Thank you! Gianpaolo Coro

Jun 12, 2018

08:31 PM D4Science Infrastructure Task #11938 (Feedback): Enable statistical.manager on SVN: I also added the user to the correct group. When activated, should be able to access subversion in r/w mode. Andrea Dell'Amico
08:27 PM D4Science Infrastructure Task #11938: Enable statistical.manager on SVN: I just gave to @gianpaolo.coro@isti.cnr.it the link to activate the user. Andrea Dell'Amico
08:24 PM D4Science Infrastructure Task #11938 (In Progress): Enable statistical.manager on SVN: Andrea Dell'Amico
06:47 PM D4Science Infrastructure Task #11938 (Closed): Enable statistical.manager on SVN: One system-management algorithm needs to write files on SVN and I would like to use the statistical.manager user.
... Gianpaolo Coro
07:35 PM D4Science Infrastructure Task #11737 (Feedback): Please setup a Nextcloud instance on D4Science: Andrea Dell'Amico
04:55 PM D4Science Infrastructure Task #11737 (In Progress): Please setup a Nextcloud instance on D4Science: The installation is running, I just have to add the ldap authentication. Andrea Dell'Amico
03:49 PM D4Science Infrastructure Upgrade #11834 (Completed): D4Science Root VO upgrade to gCube 4.11.1: Roberto Cirillo
03:49 PM D4Science Infrastructure Upgrade #11834: D4Science Root VO upgrade to gCube 4.11.1: @luca.frosini@isti.cnr.it have you notice that this is an already closed maintenance release?
Please, if you need t... Roberto Cirillo
03:44 PM D4Science Infrastructure VM Creation #11852 (Closed): Create a VM to deploy the new storage hub application.: Roberto Cirillo
11:49 AM D4Science Infrastructure Task #9123: MongoDB: upgrade dev cluster to version 3.2: Please @tommaso.piccioli@isti.cnr.it could you plan this activity? Roberto Cirillo
11:40 AM D4Science Infrastructure Task #11880 (Closed): Workspace in dev doesn't delete correctly the files stored on MongoDB when a delete from trash is performed: In order to reproduce your test, I've tried to delete my Trash directly by StorageManager libraries, after that, I've... Roberto Cirillo

Jun 11, 2018

04:45 PM D4Science Infrastructure Support #11913: delete request from user on GEMex: please reinsert:
Garcia Donaji from igeofisica.unam.mx
Montalvo Georgina from INEEL Eugenio Trumpy
02:17 PM D4Science Infrastructure Support #11913 (Closed): delete request from user on GEMex: Massimiliano Assante
02:11 PM D4Science Infrastructure Support #11913 (In Progress): delete request from user on GEMex: Massimiliano Assante
01:27 PM D4Science Infrastructure Support #11913 (Closed): delete request from user on GEMex: Pleasee delete the following users:
* stephan.dauber
* caterina.bianco86
* sespindola
* laurent.escare
* s.e.h.l... Eugenio Trumpy
03:55 PM D4Science Infrastructure VM Creation #11927 (Closed): Create the new ckan instance: ckan-aginfra.d4science.org: Francesco Mangiacrapa
03:37 PM D4Science Infrastructure Task #11924 (Closed): Dismiss https://ckan-eosc.d4science.org: The CKAN https://ckan-eosc.d4science.org can be dismissed Francesco Mangiacrapa

Jun 08, 2018

02:56 PM StocksAndFisheriesKB Feature #11806 (Closed): Add sub-groups for available time series related to GRSF Type "assessment unit": Francesco Mangiacrapa
12:10 PM D4Science Infrastructure Incident #11878 (Closed): Import profile from LinkedIn error: Massimiliano Assante
12:03 PM D4Science Infrastructure Task #11880: Workspace in dev doesn't delete correctly the files stored on MongoDB when a delete from trash is performed: Hi Roberto,
the Workspace Portlet does not interact with Storage directly but through the HL component.
On dev ... Francesco Mangiacrapa
10:12 AM D4Science Infrastructure Support #11885 (Closed): pre.d4science.org: certificate expired: The certificate was valid, but haproxy failed to reload itself because of an error in its configuration. Now it's fix... Andrea Dell'Amico

Jun 07, 2018

06:59 PM D4Science Infrastructure Task #11880: Workspace in dev doesn't delete correctly the files stored on MongoDB when a delete from trash is performed: I've also tried to put the HL libraries currently deployed on production portal but the behavior is the same. Roberto Cirillo
10:17 AM D4Science Infrastructure Task #11880: Workspace in dev doesn't delete correctly the files stored on MongoDB when a delete from trash is performed: I'm going to put the new storage libs on dev2. I could restore the storage production libraries if you need to do som... Roberto Cirillo
12:58 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.: I've added "workspace-repository.d4science.org" as smartgears_hostname. Now the storagehub service is published as th... Roberto Cirillo
10:00 AM D4Science Infrastructure Support #11885 (Closed): pre.d4science.org: certificate expired: I'm not able to connect by browser to pre.d4science.org.
This is my browser message:
~~~
pre.d4science.org uses ... Roberto Cirillo

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