Andrea Dell'Amico's activity
From Jan 15, 2016 to Feb 13, 2016
Feb 12, 2016
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06:03 PM D4Science Infrastructure Task #2221: Experiment with a new monitoring/metrics tool: influxdata (influxdb)
- And it seems that fluentd can collect the syslog output and feed it to influxdb: http://www.fluentd.org/guides/recipe...
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05:58 PM D4Science Infrastructure Task #2221: Experiment with a new monitoring/metrics tool: influxdata (influxdb)
- http://www.collectd.org and http://www.fluentd.org can talk with influxdb (and other backends) and seem to offer a wi...
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05:38 PM D4Science Infrastructure Task #2221: Experiment with a new monitoring/metrics tool: influxdata (influxdb)
- It seems better suited to collect application and system metrics and maybe send alerts based on them. While ELK seems...
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05:31 PM D4Science Infrastructure Task #2221: Experiment with a new monitoring/metrics tool: influxdata (influxdb)
- A preliminar dashboard can be used here: node0-monitoring.research-infrastructures.eu
Beware that there's no authen... -
05:55 PM D4Science Infrastructure Task #2110: Please provide new VM with Elastic Search
- The IP address is going to be 146.48.123.142
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05:30 PM D4Science Infrastructure Task #2110 (In Progress): Please provide new VM with Elastic Search
- Is elastic0-d-d4s.d4science.org an acceptable hostname?
Feb 11, 2016
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06:16 PM D4Science Infrastructure Task #2221 (In Progress): Experiment with a new monitoring/metrics tool: influxdata (influxdb)
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05:45 PM D4Science Infrastructure Task #1450 (Closed): nagios monitoring for the new mongodb production cluster
- The nagios check has been adapted.
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05:44 PM D4Science Infrastructure Task #2228: Nagios: renamining VM for mongodb nodes
- The mongodb check has been fixed.
@tommaso.piccioli@isti.cnr.it tells me that mongo6 is an instance only used when... -
03:54 PM D4Science Infrastructure Task #2228: Nagios: renamining VM for mongodb nodes
- Roberto Cirillo wrote:
> Andrea Dell'Amico wrote:
> > And now we have some errors and warnings.
>
> The warnings... -
02:14 PM D4Science Infrastructure Task #2228: Nagios: renamining VM for mongodb nodes
- And now we have some errors and warnings.
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02:12 PM D4Science Infrastructure Task #2228 (Feedback): Nagios: renamining VM for mongodb nodes
- I changed the other hostnames.
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01:56 PM D4Science Infrastructure Task #2228 (In Progress): Nagios: renamining VM for mongodb nodes
What about this one?:
~~~
mongo6-p-d4s.d4science.org
#node85.p.d4science.research-infrastructures.eu
~~~
Feb 10, 2016
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01:43 PM D4Science Infrastructure Task #2162 (Closed): Change the linux_raid nagios plugin
- Changed everywhere.
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01:43 PM D4Science Infrastructure Task #2162 (In Progress): Change the linux_raid nagios plugin
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12:26 PM D4Science Infrastructure Task #1854: Tool for usage statistics on DataMiner
- And influxdata could be even better, see https://support.d4science.org/issues/2221
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12:04 PM D4Science Infrastructure Task #2221 (Closed): Experiment with a new monitoring/metrics tool: influxdata (influxdb)
- The tool is promising:
* All the components are free software (they sell managed services and consulting)
* Can d... -
11:56 AM D4Science Infrastructure Task #2165 (Feedback): Please Remove authentication token from gcube wiki
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11:56 AM D4Science Infrastructure Task #2165 (In Progress): Please Remove authentication token from gcube wiki
- Yesterday we saw that to get rid of the token requirement implies heavy changes to the mediawiki sources. I don't thi...
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11:54 AM D4Science Infrastructure Task #2178 (Closed): Replace the cm.research-infrastructures.eu ssh key
- The new key has been generated. A run of the `common` ansible playbook is needed to have it provisioned on the VMs.
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11:52 AM D4Science Infrastructure Task #2220 (Closed): Configure the provisioned smartgears nodes with a web proxy in front of them
- The goal is to only expose ports 80 or 443 (hopefully 443 only in the near future).
Feb 09, 2016
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07:38 PM D4Science Infrastructure Task #2192 (Feedback): Gcc and boost installation
- For the record, the installed tool comes from this git repository: `http://quickrank.isti.cnr.it/?page_id=11` and it ...
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07:32 PM D4Science Infrastructure Task #2192: Gcc and boost installation
- I've found out that there's a repo for newer versions of the gcc tools. With g++4.8 (and a modification to the makefi...
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07:18 PM D4Science Infrastructure Task #2192: Gcc and boost installation
- No, there's a repo for boost 1.55. I'm going to install it, then I'll download and try to compile the quickrank packa...
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06:54 PM D4Science Infrastructure Task #2192 (In Progress): Gcc and boost installation
- Ubuntu precise is too old to satisfy your requirements. On Ubuntu 12.04 gcc 4.6 and boost 1.46 are available.
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05:55 PM D4Science Infrastructure Task #2193 (Closed): Nagios check for the Dataminer service
- They are working.
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05:49 PM D4Science Infrastructure Task #2193 (Feedback): Nagios check for the Dataminer service
- The checks are pending.
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05:39 PM D4Science Infrastructure Task #2193 (In Progress): Nagios check for the Dataminer service
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05:27 PM D4Science Infrastructure Task #2193 (Closed): Nagios check for the Dataminer service
- The URL: `http://dataminer.d4science.org/wps/WebProcessingService?Request=GetCapabilities&Service=WPS&gcube-token=<VA...
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05:24 PM D4Science Infrastructure Task #2190 (Closed): ic-proxy service should be monitored by nagios
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05:10 PM D4Science Infrastructure Task #2190 (Feedback): ic-proxy service should be monitored by nagios
- Done, waiting for the first check result to appear.
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04:44 PM D4Science Infrastructure Task #2190 (In Progress): ic-proxy service should be monitored by nagios
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03:37 PM D4Science Infrastructure Task #2190: ic-proxy service should be monitored by nagios
- Can you provide a functional URL? that way a single check can cover the nginx, tomcat and service status.
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02:00 PM D4Science Infrastructure Task #2181 (Feedback): Enable ganglia monitoring on mongodb nodes in dev environment
- The ganglia cluster is up: http://monitoring.research-infrastructures.eu/ganglia/?c=D4science%20MongoDB%20DEV%20clust...
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01:54 PM D4Science Infrastructure Task #2181: Enable ganglia monitoring on mongodb nodes in dev environment
- I see that mongo0-d-d4s.d4science.org does not exist as a hostname.
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01:48 PM D4Science Infrastructure Task #2181: Enable ganglia monitoring on mongodb nodes in dev environment
- The ansible inventory lists
~~~
mongo0-d-d4s.d4science.org
mongo5-d-d4s.d4science.org
~~~
What's the correc... -
01:46 PM D4Science Infrastructure Task #2181 (In Progress): Enable ganglia monitoring on mongodb nodes in dev environment
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01:38 PM D4Science Infrastructure Task #2178: Replace the cm.research-infrastructures.eu ssh key
- Changed the xen-tools configuration on all the hypervisors.
Feb 08, 2016
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07:41 PM D4Science Infrastructure Task #2178: Replace the cm.research-infrastructures.eu ssh key
- The new key should be only distributed via ansible and not provided on the new VMs by default. So only the already pr...
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07:39 PM D4Science Infrastructure Task #2178 (Closed): Replace the cm.research-infrastructures.eu ssh key
- Change it with a new one, because only Marko knew the passphrase but he doesn't remember it anymore.
The key must ... -
05:01 PM D4Science Infrastructure Support #2090 (Closed): Upgrade R in d4science plateform to last version
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04:26 PM D4Science Infrastructure Support #2090: Upgrade R in d4science plateform to last version
- Installed that one too.
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05:01 PM D4Science Infrastructure Task #2175 (Closed): Dismiss rstudio.d.d4science.research-infrastructures.eu and install a new rstudio-d-d4s.d4science.org similar to rstudio.d4science.org
- On a Ubuntu 10.04.
Investigate if tomcat can run as an unprivileged user, too.
The R packages list and version is... -
11:51 AM D4Science Infrastructure Task #2168 (Closed): Please upgrade disk quota on couchdb01-d-d4s.d4science.org and ouchdb02-d-d4s.d4science.org
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11:50 AM D4Science Infrastructure Task #2168 (In Progress): Please upgrade disk quota on couchdb01-d-d4s.d4science.org and ouchdb02-d-d4s.d4science.org
- I incremented the disk size of all the couchdb instances. The culprit are the couchdb and upstart log files.
The cou...
Feb 06, 2016
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12:27 PM D4Science Infrastructure Task #2165: Please Remove authentication token from gcube wiki
- Luca Frosini wrote:
> Unfortunately I don't know, but I'll take a look on the web
If you don't know already, I'll... -
12:37 AM D4Science Infrastructure Task #2165: Please Remove authentication token from gcube wiki
- Do you know if there's a configuration option for the mediawiki ldap plugin or do I have to do a research?
Feb 05, 2016
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03:28 PM D4Science Infrastructure Task #2162 (Closed): Change the linux_raid nagios plugin
- The actual one does not understand when a volume is resyncing.
Feb 04, 2016
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03:15 PM D4Science Infrastructure Task #2106 (Feedback): Install Joomla for the new PUMA portal
Feb 03, 2016
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04:42 PM D4Science Infrastructure Task #1417 (Closed): Add Cron Job to make "Redmine Issue Reminder plugin" working
- I'm disabling it for the time being.
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04:38 PM D4Science Infrastructure Support #2090 (Feedback): Upgrade R in d4science plateform to last version
- rstudio.d4science.org now runs R version 3.2.3. All the packages listed by Gianpaolo have been installed.
Feb 02, 2016
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05:55 PM D4Science Infrastructure Task #2106: Install Joomla for the new PUMA portal
- Done.
I did not understand from the documentation if it's possibile to configure memcached as the session cache. You... -
02:35 PM D4Science Infrastructure Task #2106 (In Progress): Install Joomla for the new PUMA portal
- There is no deb package for the php solr plugin. I find references to this one: https://code.google.com/archive/p/so...
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12:41 PM D4Science Infrastructure Support #2090 (In Progress): Upgrade R in d4science plateform to last version
- I can start working on it tomorrow morning, is it OK?
Jan 27, 2016
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06:27 PM D4Science Infrastructure Task #2041 (Closed): Change the portal's postfix configuration to point to the internal SMTP relay
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06:11 PM D4Science Infrastructure Task #1347 (Closed): Modify the gcube-system wiki configuration to give write access to the bluebridge group
Jan 26, 2016
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06:42 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- And here is the modified LdapAuthentication.php
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06:34 PM D4Science Infrastructure Task #1347 (Feedback): Modify the gcube-system wiki configuration to give write access to the bluebridge group
- The d4science wiki too.
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06:23 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- The Gcube wiki is now authenticating against the new ldap server only.
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06:10 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- I spoke with @luca.frosini@isti.cnr.it and he said to proceed using the email as username. I'll post a diff of the mo...
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04:47 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- I've found that to be able to login using the email address and set the correct user's group at the same time is poss...
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02:27 PM D4Science Infrastructure Task #1702 (Closed): Export LDAP groups to Redmine and populate them
Jan 25, 2016
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06:54 PM D4Science Infrastructure Task #1347 (In Progress): Modify the gcube-system wiki configuration to give write access to the bluebridge group
- I'm going to make the change tomorrow morning.
Jan 22, 2016
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05:14 PM D4Science Infrastructure Task #2052 (Closed): Add a new ganglia cluster to monitor the D4Science portals
- Done.
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04:30 PM D4Science Infrastructure Task #2052: Add a new ganglia cluster to monitor the D4Science portals
- The playbook is ready to be deployed.
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03:09 PM D4Science Infrastructure Task #2052 (In Progress): Add a new ganglia cluster to monitor the D4Science portals
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03:08 PM D4Science Infrastructure Task #2052 (Closed): Add a new ganglia cluster to monitor the D4Science portals
- Cluster members will be the five production and pre-production portal servers.
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05:14 PM D4Science Infrastructure Task #2041 (Feedback): Change the portal's postfix configuration to point to the internal SMTP relay
- Done.
I also added general iptables rules that expose only the ssh, http and https ports to the world and the 9090... -
04:28 PM D4Science Infrastructure Task #2041: Change the portal's postfix configuration to point to the internal SMTP relay
- Testing the configuration on preprod.d4science.org, right now.
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03:09 PM D4Science Infrastructure Task #2041 (In Progress): Change the portal's postfix configuration to point to the internal SMTP relay
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03:06 PM D4Science Infrastructure Task #2041: Change the portal's postfix configuration to point to the internal SMTP relay
- ~~~
i-marine.d4science.org: Ubuntu 11.04
services.d4science.org: Ubuntu 11.04
egip.d4science.org: Ubuntu 12.04
de... -
04:00 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- Luca Frosini wrote:
> Thank to the VRE user export functionality is now possible to automatically retrieve the users... -
12:15 PM D4Science Infrastructure Task #1609 (Closed): Change the Redmine LDAP Configuration dn for users
Jan 21, 2016
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07:26 PM D4Science Infrastructure Task #1702 (Feedback): Export LDAP groups to Redmine and populate them
- Step #5 completed
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07:25 PM D4Science Infrastructure Task #1609 (Feedback): Change the Redmine LDAP Configuration dn for users
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07:25 PM D4Science Infrastructure Task #1609 (In Progress): Change the Redmine LDAP Configuration dn for users
- Done. redmine now correctly syncs with the new ldap hierarchy.
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07:24 PM D4Science Infrastructure Task #1347: Modify the gcube-system wiki configuration to give write access to the bluebridge group
- Now that we have groups on the new ldap server we can exploit them for the wiki permissions too?
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05:58 PM D4Science Infrastructure Task #2041 (Closed): Change the portal's postfix configuration to point to the internal SMTP relay
- The hosts list:
~~~
i-marine.d4science.org
services.d4science.org
egip.d4science.org
descramble.d4science.org
... -
04:47 PM D4Science Infrastructure Task #2035 (Closed): Remove "node3.d4science.org" host from smart-executor ansible playbook
- Done.
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04:46 PM D4Science Infrastructure Support #2038 (Feedback): Install couchdb-cache-se-plugin on node3 via ansible
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04:46 PM D4Science Infrastructure Support #2038 (In Progress): Install couchdb-cache-se-plugin on node3 via ansible
- Done.
The general smartgears playbook has been reworked to give the possibility to install any smart-executor plugin...
Jan 20, 2016
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05:06 PM D4Science Infrastructure Support #119 (Closed): add new nagios check on bionym.d4science.org
- They are working.
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05:05 PM D4Science Infrastructure Support #119 (Feedback): add new nagios check on bionym.d4science.org
- Added a check for each URL.
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04:06 PM D4Science Infrastructure Support #119: add new nagios check on bionym.d4science.org
- Andrea Dell'Amico wrote:
> Can you provide a URL to test that the application is working? A wsdl perhaps?
@robert... -
04:05 PM D4Science Infrastructure Task #844 (Closed): Provide nagios checks for webapp running on "statbase1.smartfish.d4science.org"
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11:42 AM D4Science Infrastructure Task #844: Provide nagios checks for webapp running on "statbase1.smartfish.d4science.org"
- Gianpaolo Coro wrote:
> The application works on that link. If it is not available sometimes it's because they are w... -
04:04 PM D4Science Infrastructure Task #1854: Tool for usage statistics on DataMiner
- I see that piwik can also ingest log files, so it's the best candidate: it's more modern and more powerful.
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04:02 PM D4Science Infrastructure Task #2017 (Closed): Secure sp.d4science.org
- tomcat answers to the 8080 port without restrictions.
It should be better to disable the http port altogether, I see... -
04:00 PM D4Science Infrastructure Task #1702: Export LDAP groups to Redmine and populate them
- Massimiliano Assante wrote:
> I did try that, and Indeed I confirm the one you suspected is the actual reason.
>
... -
03:44 PM D4Science Infrastructure Task #1702: Export LDAP groups to Redmine and populate them
- You can test changing the configuration of one of them. At the next synch it should appear in the group.
We'll hav... -
03:30 PM D4Science Infrastructure Task #1702: Export LDAP groups to Redmine and populate them
- Can you list those users? I suspect that they also exist with the same email address in the old ldap server and they ...
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03:57 PM D4Science Infrastructure Task #472: Move the VMs from the 'OpenStack servers' to the new hypervisor
- See https://support.d4science.org/issues/471 for the list of server nodes that need to be freed.
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03:56 PM D4Science Infrastructure Task #471: Locate the hypervisors to dedicate to OpenStack
- From dlib14x to dlib17x? is it OK?
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03:51 PM D4Science Infrastructure Task #1417: Add Cron Job to make "Redmine Issue Reminder plugin" working
- Any news on this one?
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03:47 PM D4Science Infrastructure Task #150 (Closed): Add nagios check for sp.d4science.org tomcat
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03:46 PM D4Science Infrastructure Task #1958 (Closed): thredds.d4science.org: add Nagios check on ghn
Jan 19, 2016
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08:36 PM D4Science Infrastructure Task #1127 (Feedback): Add cotrix.d4science.org to the nagios monitoring
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08:36 PM D4Science Infrastructure Task #1127 (In Progress): Add cotrix.d4science.org to the nagios monitoring
- Done.
Note that the ajp (8009) and 8080 ports are open to the world. They should be disabled if not used.
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08:28 PM D4Science Infrastructure Task #1909 (Closed): Access to svn and gCube wiki
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08:24 PM D4Science Infrastructure Support #1325 (Closed): rstudio.d4science.org: add nagios check
- The check was in place already.
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08:22 PM D4Science Infrastructure Task #844: Provide nagios checks for webapp running on "statbase1.smartfish.d4science.org"
- Roberto Cirillo wrote:
> ~~~
> http://statbase1.smartfish.d4science.org/statbase/StartPage.action?request_locale... -
08:01 PM D4Science Infrastructure Task #844 (Feedback): Provide nagios checks for webapp running on "statbase1.smartfish.d4science.org"
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08:01 PM D4Science Infrastructure Task #844 (In Progress): Provide nagios checks for webapp running on "statbase1.smartfish.d4science.org"
- Done.
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08:07 PM D4Science Infrastructure Task #1958 (Feedback): thredds.d4science.org: add Nagios check on ghn
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08:07 PM D4Science Infrastructure Task #1958 (In Progress): thredds.d4science.org: add Nagios check on ghn
- Done.
Note that the server has the ajp port open to the world, and the bluethoot service running (?).
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07:55 PM D4Science Infrastructure Task #150 (Feedback): Add nagios check for sp.d4science.org tomcat
- I added the check.
The certificate expiration date is also checked.
Note that tomcat answers to the 8080 port wit... -
07:42 PM D4Science Infrastructure Task #149 (Feedback): Add nagios check for www.d4science.org and www.gcube-system.org websites
- Done. The certificate expiration date is also checked.
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07:41 PM D4Science Infrastructure Task #149 (In Progress): Add nagios check for www.d4science.org and www.gcube-system.org websites
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07:23 PM D4Science Infrastructure Support #119 (In Progress): add new nagios check on bionym.d4science.org
- Can you provide a URL to test that the application is working? A wsdl perhaps?
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