Appendix¶
Examples of metadata about other research products: a method and a research package collected by OpenAIRE from Zenodo
Table A1-A2 show the properties and relationships of a method and package uploaded by researchers on OpenAIRE’s Zenodo.
We imagined how a possible workflow could be represented as an OpenAIRE-Connect other research product and included in a OpenAIRE-Connect other research product as a research package. We took inspirations from the Kick-off presentation by CNRS about neuroinformatics, we apologize for any mistake.
Table A1Example record for other research product for a workflow for image pre-processing: properties
Property
Value
Notes
Result
Title
Nifti brain image pre-processing workflow
Date (of creation)
2017-01-18
Date (of submission)
2017-01-19
Best Access Rights
OPEN
Publisher
Zenodo
Description
This method is a Taverna workflow for the pre-processing of brain images in Nifti-1 format (https://nifti.nimh.nih.gov/nifti-1) from the Shanoir database. Pre-processing tasks performed by the workflow are: denoising and inhomogeneity correction.
PID (doi)
http://dx.doi.org/10.100X/XXX
The DOI has been assigned when authors uploaded the method on Zenodo.
Language
eng
Language specified according to the ISO639 3-letter language codes.
Subject (from classification scheme "ACM Computing Classification System")
Image processing
Source
Zenodo
ResourceType
Workflow
It is assumed that the community agreed to use a vocabulary containing the value “Workflow”
Country
FR
Instance
Format
XML/RDF
License
CC-BY
Access Rights
OPEN
Type
Taverna Workflow
Values of this field must comply to a vocabulary.
Web resource
http://my.workflow.download.url
Other Research Product
Contact person
Miriam Baglioni
Contact group
dnet group
Distribution Location
hhtp://my.distribution.location
Version
1.0.0
Tool
(Taverna, https://taverna.incubator.apache.org/)
Documentation
http://my.workflow.documentation.url
Table A2 Example record for other research products for workflow for image pre-processing: relationships
Relationship
Target Type
Target ID
Notes
collectedFrom
Datasource
Datasource_1 (Zenodo)
hostedBy
Datasource
Datasource_1 (Zenodo)
isProducedBy
Project
Project_1
isRelatedTo
Result
Publication_1
A publication describing a research activity that used this workflow
hasAuthorInstitution
Organization
IGIB (Institute of Genomics and Integrative Biology)
aggregatedBy
Result
OtheResearchProduct_P1
See the other research product metadata in the following tables
isRelevantTo
Community
Community_1 (Earth and Environmental Science Research Community )
isVersionOf
Result
OtheResearchProduct_W1 (previous version of this method)
Table A3-A4 describe one other research product for a research package uploaded on Zenodo
Table A3 Example record for other research product for a research package: properties
Property
Value
Notes
Result
Title
Pre-processing Nifti-1 brain images
Date (of creation)
2017-01-19
Date (of submission)
2017-01-23
BestAccessRights
OPEN
Publisher
Zenodo
Description
This package contains resources used and produced during the elaboration of a dataset of annotated Nifti-1 brain images. The package contains: the set of images used for the elaboration, the workflow used for the image pre-processing, the data mining algorithms used to analyze the dataset, and the output results.
PID (doi)
http://dx.doi.org/10.100X/PPP
The DOI has been assigned when authors uploaded the package on Zenodo.
Language
eng
Language specified according to the ISO639 3-letter language codes.
Subject (from classification scheme "MESH")
Neurosciences
Source
Zenodo
ResourceType
Research Package
It is assumed that the community agreed to use a vocabulary containing the value “Research Package”
Country
FR
Instance
Format
SCUFL2
License
CC-BY
Access Rights
EMBARGO
EmbargoEndDate
2018-01-01
Type
Workflow Bundle
Values of this field must comply to a vocabulary.
Web resource
http://url.to.download.package
Other Research Product
Contact person
Alessia Bardi
Contact group
dnet group
Distribution Location
hhtp://package.distribution.location
Version
1.0.0
Tool
(myExperiment, myExperiment.org)
Tool
(Taverna, https://taverna.incubator.apache.org/)
Documentation
http://my.package.documentation.url
Table A4 Example record for other research product for a package: relationships
Relationship
Target Type
Target ID
Notes
collectedFrom
Datasource
Datasource_1 (Zenodo)
hostedBy
Datasource
Datasource_1 (Zenodo)
isProducedBy
Project
Project_2
hasAuthorInstitution
Organization
CNR
aggregates
Result
OtherResearchProduct_W1
The research product described above
isRelevantTo
Community
Community_1 (Neuroinformatics Research Community )
isVersionOf
Result
OtherResearchProduct_P2
OtherResearchProduct_P2 is the previous version of this research product
