Activity

From Aug 09, 2017 to Sep 07, 2017

Sep 04, 2017

08:01 PM Task #9576: provision the smartgear logback configuration starting from a template: I have a prototype that uses the new rolling policy and also sets a global cap.
The log files will be moved into t... Andrea Dell'Amico
07:49 PM Task #9576 (In Progress): provision the smartgear logback configuration starting from a template: Andrea Dell'Amico
06:22 PM Task #9104: data.d4science: remove rootLogger inside webapps: Andrea Dell'Amico wrote:
> I forgot to tell you that you need to set the variable:
>
> ~~~
> tomcat_install_the_... Roberto Cirillo
05:49 PM Task #9104: data.d4science: remove rootLogger inside webapps: I forgot to tell you that you need to set the variable:
~~~
tomcat_install_the_log4j_properties: False
~~~
Ot... Andrea Dell'Amico
05:41 PM Task #9104 (Closed): data.d4science: remove rootLogger inside webapps: I've deployed the new apps on data-d.d4science.org and configured a single log4j.properties under tomcat. Now it work... Roberto Cirillo
06:17 PM Task #9571 (Closed): HL: not add extensions to files during the zip creation: It will be released in gCube 4.6.1. Valentina Marioli
05:09 PM Task #9585: FusionRegistry - Update data in new FusionRegistry 8.4.15 in prod: This is the link to the old registry:
http://sdmxregistry.d4science.research-infrastructures.eu:8080/FusionRegistry/ Giancarlo Panichi
05:04 PM Task #9585: FusionRegistry - Update data in new FusionRegistry 8.4.15 in prod: For this release 4.6.1 we keep the db mysql in the future we could evaluate it. Giancarlo Panichi
04:42 PM Task #9585: FusionRegistry - Update data in new FusionRegistry 8.4.15 in prod: I see that FusionRegistry also supports postgresql. Isn't there a way to migrate the contents to postgresql? We have ... Andrea Dell'Amico
04:35 PM Task #9585 (Closed): FusionRegistry - Update data in new FusionRegistry 8.4.15 in prod: The new version of FusionRegistry 8.4.15 is available for production on:
https://fusionregistry.d4science.org/Fus... Giancarlo Panichi
04:57 PM VM Creation #8990: new instance of FusionRegistry in production: I wrote down the steps required to actually activate FusionSecurity inside FusionRegistry here: https://support.d4sci... Andrea Dell'Amico
04:40 PM VM Creation #8990 (Closed): new instance of FusionRegistry in production: Giancarlo Panichi
04:37 PM VM Creation #8990: new instance of FusionRegistry in production: The new version of FusionRegistry 8.4.15 is available for production on:
https://fusionregistry.d4science.org/Fusi... Giancarlo Panichi
02:16 PM VM Creation #8990: new instance of FusionRegistry in production: @andrea.dellamico@isti.cnr.it in FusionSecurity you can export and import the configuration directly from the graphic... Giancarlo Panichi
01:27 PM VM Creation #8990: new instance of FusionRegistry in production: Giancarlo Panichi wrote:
> The only configuration that was made is on FusionSecurity where I added the user tabulard... Andrea Dell'Amico
11:33 AM VM Creation #8990: new instance of FusionRegistry in production: The only configuration that was made is on FusionSecurity where I added the user tabulardata as you see in
https:... Giancarlo Panichi
11:25 AM VM Creation #8990: new instance of FusionRegistry in production: I can confirm that everything is OK and we are ready for bringing into production the new version. However, according... Ciro Formisano
11:02 AM VM Creation #8990: new instance of FusionRegistry in production: TabMan is ready to upgrade to the new version of FusionRegistry.
You can copy the development configuration with Fun... Giancarlo Panichi
03:06 PM Task #9583: Represent ASFIS AquaMaps distribution with NetCDF format: Re: 1; why only for ASFIS Species? That suggests a link to FAO that is (currently) not established
Re: 3: it will be... Anton Ellenbroek
02:40 PM Task #9583 (Closed): Represent ASFIS AquaMaps distribution with NetCDF format: The current AquaMaps distributions for ASFIS species will be also represented under NetCDF format through an automati... Gianpaolo Coro
02:34 PM Task #9582 (Closed): Thredds on smartgears: it's needed to complete the provisioning: We have a playbook partially configured to deploy the thredds application on a smartgears node, some configurations a... Roberto Cirillo
10:08 AM Upgrade #9541 (In Progress): /gcube/preprod upgrade to gCube 4.6.1 (CommonApps): Roberto Cirillo
09:23 AM Incident #9577 (In Progress): Social networking: mentions to group and hashtags clashing may cause some malfunctions: Just a formatting issue, the notification was delivered correctly (being part of the mentioned group I did receive it... Massimiliano Assante
09:11 AM Incident #9577 (Closed): Social networking: mentions to group and hashtags clashing may cause some malfunctions: I just created a post in BlueBRIDGEproject VRE
https://bluebridge.d4science.org/group/bluebridgeproject?oid=0e952... Leonardo Candela

Sep 02, 2017

05:29 PM Task #9576: provision the smartgear logback configuration starting from a template: Since logback 1.1.7 there's an appender called `SizeAndTimeBasedRollingPolicy` that does exactly what I'm asking. A r... Andrea Dell'Amico
05:27 PM Task #9576: provision the smartgear logback configuration starting from a template: Last: if a size based rolling appender can be configured, this would be very helpful to keep the total log size under... Andrea Dell'Amico
05:26 PM Task #9576: provision the smartgear logback configuration starting from a template: Another parameter that can be configured is `maxHistory`: 30 days is usually too much.
Andrea Dell'Amico
05:24 PM Task #9576: provision the smartgear logback configuration starting from a template: Also, add the following configuration on the dataminers (the log path will change):
~~~
<appender name="ANALYSIS"... Andrea Dell'Amico
05:23 PM Task #9576 (Closed): provision the smartgear logback configuration starting from a template: The in place xml editing is not reliable, and it's impossible to include or exclude chunks of configuration settings.... Andrea Dell'Amico
02:17 PM VM Creation #9301 (Closed): VM creation for GeoNetwork connector development: Andrea Dell'Amico
02:14 PM VM Creation #8990 (Feedback): new instance of FusionRegistry in production: @g.panichi@isti.cnr.it any news about it? Andrea Dell'Amico
02:08 PM VM Creation #7465 (Closed): Please Create a VM to install SmartExecutor for SmartArea: Andrea Dell'Amico

Sep 01, 2017

06:39 PM Task #9571 (Closed): HL: not add extensions to files during the zip creation: During the zip creation, the extensions are automatically added to files.
We should skip this step to avoid communi... Valentina Marioli
06:34 PM Task #9570 (Rejected): Metadata information not correctly reported to SAI: Randomly, a project's full metadata information is not correctly reported to SAI and thus is not correctly saved on t... Valentina Marioli
06:32 PM Task #9569 (Closed): HL: Problem with locks: In some cases, the lock is not released when the file is overwritten.
This issue is related to communication proble... Valentina Marioli
06:29 PM Support #9536 (Closed): Critical Workspace-SAI issues: To fix the issues:
1. during the zip creation, the extensions are automatically added to files. We can skip this ste... Valentina Marioli
06:03 PM Support #9536 (In Progress): Critical Workspace-SAI issues: Valentina Marioli
05:10 PM Task #9549: Make R scripts inherit user name and VRE: this feature has been released in 4.6.1 Lucio Lelii
03:20 PM Task #9549 (Closed): Make R scripts inherit user name and VRE: It works well, now three parameters are inherited: gcube_username, gcube_context, and gcube_token Gianpaolo Coro
03:47 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: Gianpaolo Coro wrote:
> One of the big blobs contains a large quantity of objects generated by the old-good Statisti... Costantino Perciante
02:46 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: One of the big blobs contains a large quantity of objects generated by the old-good Statistical Manager between 2014 ... Gianpaolo Coro
01:10 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: @valentina.marioli@isti.cnr.it just asked to restore those backups. You can find them on workspace-repository-prod1.d... Andrea Dell'Amico
01:02 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: If we really want to understand how the content is stored in there, then we will need to inspect the jackrabbit code.... Costantino Perciante
12:15 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: Gianpaolo Coro wrote:
> When a computation fails, a gCube Item is created having a stacktrace attached. In the case ... Andrea Dell'Amico
12:09 PM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: I also uploaded a blob of something that seems an execution log, with failures: https://goo.gl/VNmpeJ
Andrea Dell'Amico
11:47 AM Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table: When a computation fails, a gCube Item is created having a stacktrace attached. In the case of BiOnym, this can be lo... Gianpaolo Coro
11:02 AM Task #9551 (In Progress): Some jobs wrote big chunks of data into the persistence jackrabbit table: Valentina Marioli
03:33 PM Incident #9522: Authorisation service not working in DEV: I cannot find the logs on the standard error. Regarding the log level is fine with me to change it to WARN or ERROR. Lucio Lelii
02:39 PM Task #9477 (Closed): Create new Postgres Database: Ok, perfect.
I succesfully created tables, views, etc... On the Dev environment.
Tested succesfully the Prod.
Than... Eric Perrone
02:34 PM Task #9477: Create new Postgres Database: Ok, perfect.
I succesfully created tables, views, etc... On the Dev environment.
Tested succesfully the Prod.
Than... Eric Perrone
01:24 PM VM Creation #9354 (Closed): VM Creation for AquacultureAtlasGeneration dedicated GeoNetwork: I guess we can close this one, the DB management is a matter of #9511 Andrea Dell'Amico
12:35 PM VM Creation #9354: VM Creation for AquacultureAtlasGeneration dedicated GeoNetwork: any news? Pasquale Pagano

Aug 31, 2017

05:55 PM Task #9549 (Feedback): Make R scripts inherit user name and VRE: the 2 new environment properties are **gcube_username** and **gcube_context**. This version is deplyed in **gcube/dev... Lucio Lelii
03:59 PM VM Creation #9558 (Closed): Updated VM for GN3 Migration: In order to migrate development infrastructure to GeoNetwork 3.x we need an updated VM with java 8 and SmartGears. Fabio Sinibaldi
11:28 AM Task #9543 (Closed): Add a TODO plugin to redmine: Also installed in production. Andrea Dell'Amico
10:29 AM Upgrade #9541 (Planned): /gcube/preprod upgrade to gCube 4.6.1 (CommonApps): Roberto Cirillo

Aug 30, 2017

11:32 PM Task #9551 (In Progress): Some jobs wrote big chunks of data into the persistence jackrabbit table: From Aug 19th and 21th something (someone) wrote repeatedly into the workspace big chunks of data into the persistenc... Andrea Dell'Amico
04:41 PM Support #9548 (Closed): Smaph app: error from remote server: ok thanks. Roberto Cirillo
04:25 PM Support #9548: Smaph app: error from remote server: Hi Roberto,
that service is hosted on an unstable machine that may give errors from time to time. I have checked i... Marco Cornolti
03:09 PM Support #9548 (Closed): Smaph app: error from remote server: The smaph app seems to receive an error from a remote server.
I see in the catalina log the following url:
~~~
h... Roberto Cirillo
04:10 PM Task #9549 (Closed): Make R scripts inherit user name and VRE: The R scripts are going to inherit the user's token. Indeed, also the user name and the called VRE should be added, w... Gianpaolo Coro
02:34 PM Upgrade #9541: /gcube/preprod upgrade to gCube 4.6.1 (CommonApps): **Hosting Nodes**
* **(CNR) DONE** data-d.d4science.org
* **(NKUA) DONE** dl001.madgik.di.uoa.gr - install
*GH... Roberto Cirillo
12:51 PM Upgrade #9547 (Completed): D4Science Root VO upgrade to gCube 4.6.1: Roberto Cirillo

Aug 29, 2017

08:03 PM Task #9543 (In Progress): Add a TODO plugin to redmine: The plugin is available on the dev instance: https://redmine-d.d4science.org
It is active on the D4Science Infrastru... Andrea Dell'Amico
05:39 PM Task #9543 (Closed): Add a TODO plugin to redmine: A *TODO list* plugin could be useful to some users. A candidate is https://redmine.org/plugins/redmine_issue_todo_lis... Andrea Dell'Amico
02:45 PM Task #5447 (In Progress): Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance: I'm reopening since the request is not yet satisfied. As you mentioned above, it depends on #5699.
If the latter can... Emmanuel Blondel
12:31 PM Upgrade #9541 (Completed): /gcube/preprod upgrade to gCube 4.6.1 (CommonApps): Roberto Cirillo

Aug 28, 2017

06:27 PM Task #9323 (Closed): Move some hadoop workers from the old cluster to the HDP one: The new nodes have been named worker[4:11]-hadoop.d4science.org. They are now part of the HDP cluster.
Andrea Dell'Amico
11:43 AM Support #9536: Critical Workspace-SAI issues: The project TEST_SAI_WS_INTERACTION has been shared and already presents error n. 3 Gianpaolo Coro
11:34 AM Support #9536 (Closed): Critical Workspace-SAI issues: Here I report a number of issues that are preventing users to integrate algorithms with the e-Infrastructure. These i... Gianpaolo Coro

Aug 25, 2017

03:33 PM Task #9323 (In Progress): Move some hadoop workers from the old cluster to the HDP one: workers node[6:13].t.hadoop.research-infrastructures.eu have been decommissioned.
I'm going to rename and reinstall ... Andrea Dell'Amico

Aug 23, 2017

01:28 PM Task #9532 (Closed): workspace: lots of rows into the datastore_datastore postgresql tables: I was told that the datastore was not used, but I see that the datastore table lists thousand of rows:
~~~
# se... Andrea Dell'Amico

Aug 22, 2017

04:05 PM Incident #9531 (Closed): Shared disk between Portal cluster nodes not responding - file system problem?: The NFS server stopped working, now it's running again.
Investigating.
Andrea Dell'Amico
03:59 PM Incident #9531 (Closed): Shared disk between Portal cluster nodes not responding - file system problem?: Something is wrong with the file system of the 2 nodes of the cluster, as a result the portal do not show any image o... Massimiliano Assante

Aug 21, 2017

05:34 PM Task #9526 (Closed): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance: Done. Andrea Dell'Amico
05:22 PM Task #9526 (In Progress): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance: Andrea Dell'Amico
04:53 PM Task #9526 (Closed): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance: The EDISON production instance has an IP address 194.149.136.227
it should be able to contact the DB survey-db > p... Massimiliano Assante
03:38 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance: Done. Andrea Dell'Amico
03:23 PM Task #9525 (In Progress): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance: Andrea Dell'Amico
03:22 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance: Andrea Dell'Amico
03:18 PM Task #9525 (In Progress): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance: Andrea Dell'Amico
02:28 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance: The production instance has an IP address 194.149.136.227 (datasciencepro.eu) Massimiliano Assante
03:29 PM Task #9524 (Closed): Enable D4Science Cassandra cluster to be contacted by EDISON Portal instance: Done.
Andrea Dell'Amico
02:27 PM Task #9524 (Closed): Enable D4Science Cassandra cluster to be contacted by EDISON Portal instance: The production portal instance has an IP address 194.149.136.227 (datasciencepro.eu)
Massimiliano Assante
03:24 PM Task #9523 (Closed): EDISON Portal instance IP to be authorised on Production Infrastructure: Andrea Dell'Amico
01:11 PM Task #9523 (Closed): EDISON Portal instance IP to be authorised on Production Infrastructure: As reported by @boro.jakimovski@finki.ukim.mk the EDISON Portal production instance has an IP address 194.149.136.227... Massimiliano Assante
01:20 PM Incident #9522 (Closed): Authorisation service not working in DEV: There was more than one problem:
* The auth service failed to authenticate against postgresql (certificate problem... Andrea Dell'Amico
12:41 PM Incident #9522 (Closed): Authorisation service not working in DEV: it seems the Authorisation service not working in the development infrastructure
~~~
2017-08-21 10:40:05,799 ERR... Massimiliano Assante
01:11 PM Task #9203 (In Progress): Enable access for production EDISON Portal instance: Massimiliano Assante

Aug 18, 2017

07:55 PM Incident #9520 (Closed): Impossible to connect to Sardara DB: Tommaso Piccioli
07:15 PM Incident #9520 (In Progress): Impossible to connect to Sardara DB: Sorry, still problems with the host, I was already working on it, will start again in minutes. Tommaso Piccioli
06:51 PM Incident #9520: Impossible to connect to Sardara DB: Thanks. However, it crashed again. I think it is due to a query that I execute. Can you fix it again? And i will avoi... Paul Taconet
06:05 PM Incident #9520 (Closed): Impossible to connect to Sardara DB: There was a problem with the server, now it works. Tommaso Piccioli
05:17 PM Incident #9520 (Closed): Impossible to connect to Sardara DB: When I try to connect to Sardara PostgreSQL DB I get the following error:
Error in postgresqlNewConnection(drv, ..... Paul Taconet

Aug 16, 2017

05:58 PM Incident #9519 (Closed): Problem with my R studio on Tuna Atlas VRE: Paul Taconet
05:57 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE: It is working again, thanks
Paul Paul Taconet
02:01 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE: Ok, now it seems to work.
Let me make some tries and if it is ok, I close the ticket Paul Taconet
01:59 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE: It is still not working. I get the enclosed error Paul Taconet
01:45 PM Incident #9519 (In Progress): Problem with my R studio on Tuna Atlas VRE: Paul Taconet wrote:
> What do you mean by 'server'?
Never mind, I was checking in the wrong place. I removed you ... Andrea Dell'Amico
01:26 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE: What do you mean by 'server'? Paul Taconet
01:23 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE: Do you know what server you were connected to?
Andrea Dell'Amico
01:09 PM Incident #9519 (Closed): Problem with my R studio on Tuna Atlas VRE: Hi,
My Rstudio session on the FAO Tuna Atlas VRE is not working anymore. I guess it is because of a process that I h... Paul Taconet

Aug 13, 2017

03:54 PM Task #9368: JackRabbit Repo cluster over Postgres for development infra: I've added a wiki page with the steps needed to add/remove a node to/from the cluster, here: https://support.d4scienc... Andrea Dell'Amico
03:25 PM Task #6308: Migrate production infrastructure nodes to Java 8: Also the geonetwork servers run with Java7, it's an old version that do not work with java 8. Andrea Dell'Amico

Aug 12, 2017

07:05 PM Task #9498 (Closed): Add cronjob for restarting the registry service in preproduction environment: Done. Andrea Dell'Amico
05:17 PM Task #9477 (Feedback): Create new Postgres Database: Andrea Dell'Amico
04:52 PM Task #9477 (In Progress): Create new Postgres Database: Andrea Dell'Amico
04:40 PM Task #9512 (Closed): geonetwork 2.6 is not compatible with Java 8: I configured the ansible playbooks to use openjdk 7 on all the production geonetworks.
Andrea Dell'Amico
04:14 PM Task #9512 (Closed): geonetwork 2.6 is not compatible with Java 8: The latest supported is Java 7.
Andrea Dell'Amico

Aug 11, 2017

12:56 PM Task #9356: Jackrabbit configuration files needed to complete the provisioning: We can close it, if you can confirm that no manual change to the configuration files was needed.
The operations need... Andrea Dell'Amico
11:44 AM Incident #9510: last backup of the table metadata.metadata of Sardara database: OK, I was extracting the August 10th early backup right now.
We have (almost) daily backups of the database, but w... Andrea Dell'Amico
11:40 AM Incident #9510 (Closed): last backup of the table metadata.metadata of Sardara database: I have manually fixed the problem with the help of my colleagues
I therefore close the issue.
Paul Paul Taconet

Aug 10, 2017

04:12 PM Incident #9510 (Closed): last backup of the table metadata.metadata of Sardara database: I have made a wrong 'UPDATE' query on the Sardara database and I have lost some data.
Would it be possible to get ... Paul Taconet

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