D4Science Infrastructure

Aug 31, 2017

05:55 PM Task #9549 (Feedback): Make R scripts inherit user name and VRE

the 2 new environment properties are **gcube_username** and **gcube_context**. This version is deplyed in **gcube/dev... Lucio Lelii

03:59 PM VM Creation #9558 (Closed): Updated VM for GN3 Migration

In order to migrate development infrastructure to GeoNetwork 3.x we need an updated VM with java 8 and SmartGears. Fabio Sinibaldi

11:28 AM Task #9543 (Closed): Add a TODO plugin to redmine

Also installed in production. Andrea Dell'Amico

10:29 AM Upgrade #9541 (Planned): /gcube/preprod upgrade to gCube 4.6.1 (CommonApps)

Roberto Cirillo

Aug 30, 2017

11:32 PM Task #9551 (In Progress): Some jobs wrote big chunks of data into the persistence jackrabbit table

From Aug 19th and 21th something (someone) wrote repeatedly into the workspace big chunks of data into the persistenc... Andrea Dell'Amico

04:41 PM Support #9548 (Closed): Smaph app: error from remote server

ok thanks. Roberto Cirillo

04:25 PM Support #9548: Smaph app: error from remote server

Hi Roberto,
that service is hosted on an unstable machine that may give errors from time to time. I have checked i... Marco Cornolti

03:09 PM Support #9548 (Closed): Smaph app: error from remote server

The smaph app seems to receive an error from a remote server.
I see in the catalina log the following url:
~~~
h... Roberto Cirillo

04:10 PM Task #9549 (Closed): Make R scripts inherit user name and VRE

The R scripts are going to inherit the user's token. Indeed, also the user name and the called VRE should be added, w... Gianpaolo Coro

02:34 PM Upgrade #9541: /gcube/preprod upgrade to gCube 4.6.1 (CommonApps)

**Hosting Nodes**
* **(CNR) DONE** data-d.d4science.org
* **(NKUA) DONE** dl001.madgik.di.uoa.gr - install
*GH... Roberto Cirillo

12:51 PM Upgrade #9547 (Completed): D4Science Root VO upgrade to gCube 4.6.1

Roberto Cirillo

Aug 29, 2017

08:03 PM Task #9543 (In Progress): Add a TODO plugin to redmine

The plugin is available on the dev instance: https://redmine-d.d4science.org
It is active on the D4Science Infrastru... Andrea Dell'Amico

05:39 PM Task #9543 (Closed): Add a TODO plugin to redmine

A *TODO list* plugin could be useful to some users. A candidate is https://redmine.org/plugins/redmine_issue_todo_lis... Andrea Dell'Amico

02:45 PM Task #5447 (In Progress): Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance

I'm reopening since the request is not yet satisfied. As you mentioned above, it depends on #5699.
If the latter can... Emmanuel Blondel

12:31 PM Upgrade #9541 (Completed): /gcube/preprod upgrade to gCube 4.6.1 (CommonApps)

Roberto Cirillo

Aug 28, 2017

06:27 PM Task #9323 (Closed): Move some hadoop workers from the old cluster to the HDP one

The new nodes have been named worker[4:11]-hadoop.d4science.org. They are now part of the HDP cluster.
Andrea Dell'Amico

11:43 AM Support #9536: Critical Workspace-SAI issues

The project TEST_SAI_WS_INTERACTION has been shared and already presents error n. 3 Gianpaolo Coro

11:34 AM Support #9536 (Closed): Critical Workspace-SAI issues

Here I report a number of issues that are preventing users to integrate algorithms with the e-Infrastructure. These i... Gianpaolo Coro

Aug 25, 2017

03:33 PM Task #9323 (In Progress): Move some hadoop workers from the old cluster to the HDP one

workers node[6:13].t.hadoop.research-infrastructures.eu have been decommissioned.
I'm going to rename and reinstall ... Andrea Dell'Amico

Aug 23, 2017

01:28 PM Task #9532 (Closed): workspace: lots of rows into the datastore_datastore postgresql tables

I was told that the datastore was not used, but I see that the datastore table lists thousand of rows:
~~~
# se... Andrea Dell'Amico

Aug 22, 2017

04:05 PM Incident #9531 (Closed): Shared disk between Portal cluster nodes not responding - file system problem?

The NFS server stopped working, now it's running again.
Investigating.
Andrea Dell'Amico

03:59 PM Incident #9531 (Closed): Shared disk between Portal cluster nodes not responding - file system problem?

Something is wrong with the file system of the 2 nodes of the cluster, as a result the portal do not show any image o... Massimiliano Assante

Aug 21, 2017

05:34 PM Task #9526 (Closed): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance

Done. Andrea Dell'Amico

05:22 PM Task #9526 (In Progress): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance

Andrea Dell'Amico

04:53 PM Task #9526 (Closed): Enable Postgres DB "survey-db" on postgresql-srv.d4science.org to be contacted by EDISON Portal instance

The EDISON production instance has an IP address 194.149.136.227
it should be able to contact the DB survey-db > p... Massimiliano Assante

03:38 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance

Done. Andrea Dell'Amico

03:23 PM Task #9525 (In Progress): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance

Andrea Dell'Amico

03:22 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance

Andrea Dell'Amico

03:18 PM Task #9525 (In Progress): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance

Andrea Dell'Amico

02:28 PM Task #9525 (Closed): Enable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance

The production instance has an IP address 194.149.136.227 (datasciencepro.eu) Massimiliano Assante

03:29 PM Task #9524 (Closed): Enable D4Science Cassandra cluster to be contacted by EDISON Portal instance

Done.
Andrea Dell'Amico

02:27 PM Task #9524 (Closed): Enable D4Science Cassandra cluster to be contacted by EDISON Portal instance

The production portal instance has an IP address 194.149.136.227 (datasciencepro.eu)
Massimiliano Assante

03:24 PM Task #9523 (Closed): EDISON Portal instance IP to be authorised on Production Infrastructure

Andrea Dell'Amico

01:11 PM Task #9523 (Closed): EDISON Portal instance IP to be authorised on Production Infrastructure

As reported by @boro.jakimovski@finki.ukim.mk the EDISON Portal production instance has an IP address 194.149.136.227... Massimiliano Assante

01:20 PM Incident #9522 (Closed): Authorisation service not working in DEV

There was more than one problem:
* The auth service failed to authenticate against postgresql (certificate problem... Andrea Dell'Amico

12:41 PM Incident #9522 (Closed): Authorisation service not working in DEV

it seems the Authorisation service not working in the development infrastructure
~~~
2017-08-21 10:40:05,799 ERR... Massimiliano Assante

01:11 PM Task #9203 (In Progress): Enable access for production EDISON Portal instance

Massimiliano Assante

Aug 18, 2017

07:55 PM Incident #9520 (Closed): Impossible to connect to Sardara DB

Tommaso Piccioli

07:15 PM Incident #9520 (In Progress): Impossible to connect to Sardara DB

Sorry, still problems with the host, I was already working on it, will start again in minutes. Tommaso Piccioli

06:51 PM Incident #9520: Impossible to connect to Sardara DB

Thanks. However, it crashed again. I think it is due to a query that I execute. Can you fix it again? And i will avoi... Paul Taconet

06:05 PM Incident #9520 (Closed): Impossible to connect to Sardara DB

There was a problem with the server, now it works. Tommaso Piccioli

05:17 PM Incident #9520 (Closed): Impossible to connect to Sardara DB

When I try to connect to Sardara PostgreSQL DB I get the following error:
Error in postgresqlNewConnection(drv, ..... Paul Taconet

Aug 16, 2017

05:58 PM Incident #9519 (Closed): Problem with my R studio on Tuna Atlas VRE

Paul Taconet

05:57 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE

It is working again, thanks
Paul Paul Taconet

02:01 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE

Ok, now it seems to work.
Let me make some tries and if it is ok, I close the ticket Paul Taconet

01:59 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE

It is still not working. I get the enclosed error Paul Taconet

01:45 PM Incident #9519 (In Progress): Problem with my R studio on Tuna Atlas VRE

Paul Taconet wrote:
> What do you mean by 'server'?
Never mind, I was checking in the wrong place. I removed you ... Andrea Dell'Amico

01:26 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE

What do you mean by 'server'? Paul Taconet

01:23 PM Incident #9519: Problem with my R studio on Tuna Atlas VRE

Do you know what server you were connected to?
Andrea Dell'Amico

01:09 PM Incident #9519 (Closed): Problem with my R studio on Tuna Atlas VRE

Hi,
My Rstudio session on the FAO Tuna Atlas VRE is not working anymore. I guess it is because of a process that I h... Paul Taconet

Aug 13, 2017

03:54 PM Task #9368: JackRabbit Repo cluster over Postgres for development infra

I've added a wiki page with the steps needed to add/remove a node to/from the cluster, here: https://support.d4scienc... Andrea Dell'Amico

03:25 PM Task #6308: Migrate production infrastructure nodes to Java 8

Also the geonetwork servers run with Java7, it's an old version that do not work with java 8. Andrea Dell'Amico

Aug 12, 2017

07:05 PM Task #9498 (Closed): Add cronjob for restarting the registry service in preproduction environment

Done. Andrea Dell'Amico

05:17 PM Task #9477 (Feedback): Create new Postgres Database

Andrea Dell'Amico

04:52 PM Task #9477 (In Progress): Create new Postgres Database

Andrea Dell'Amico

04:40 PM Task #9512 (Closed): geonetwork 2.6 is not compatible with Java 8

I configured the ansible playbooks to use openjdk 7 on all the production geonetworks.
Andrea Dell'Amico

04:14 PM Task #9512 (Closed): geonetwork 2.6 is not compatible with Java 8

The latest supported is Java 7.
Andrea Dell'Amico

Aug 11, 2017

12:56 PM Task #9356: Jackrabbit configuration files needed to complete the provisioning

We can close it, if you can confirm that no manual change to the configuration files was needed.
The operations need... Andrea Dell'Amico

11:44 AM Incident #9510: last backup of the table metadata.metadata of Sardara database

OK, I was extracting the August 10th early backup right now.
We have (almost) daily backups of the database, but w... Andrea Dell'Amico

11:40 AM Incident #9510 (Closed): last backup of the table metadata.metadata of Sardara database

I have manually fixed the problem with the help of my colleagues
I therefore close the issue.
Paul Paul Taconet

Aug 10, 2017

04:12 PM Incident #9510 (Closed): last backup of the table metadata.metadata of Sardara database

I have made a wrong 'UPDATE' query on the Sardara database and I have lost some data.
Would it be possible to get ... Paul Taconet

Aug 03, 2017

05:34 PM Task #9104 (Paused): data.d4science: remove rootLogger inside webapps

Francesco Mangiacrapa

04:00 PM Task #9356 (Feedback): Jackrabbit configuration files needed to complete the provisioning

Costantino Perciante

11:12 AM Task #9498 (Closed): Add cronjob for restarting the registry service in preproduction environment

It's needed to restart the registry service instance deployed on the following host:
~~~
registry-pre.d4science.o... Roberto Cirillo

10:10 AM Task #9368: JackRabbit Repo cluster over Postgres for development infra

Yesterday we take some hours to add the second node to the cluster and start up it as well, make some tests and so on... Costantino Perciante

09:04 AM VRE #9403 (Available): Create a VRE for EOSC Service Portfolio

Leonardo Candela

09:04 AM VM Creation #9401 (Closed): Create a CKAN instance for EOSC VRE supporting Service Portfolio development

Leonardo Candela

09:03 AM Task #9404 (Closed): Configure the CKAN instance serving the EOSC Service Portfolio with a resource typology compliant with eInfraCentral template

Leonardo Candela

Aug 02, 2017

05:54 PM Task #9189: Temporary area via Workspace

We need to create temporary files through HL. Clearly then the HL will use the Storage temporary ara for the payloads. Pasquale Pagano

04:49 PM Task #9189: Temporary area via Workspace

I am not sure I have understood correctly. Do we need to create temporary files through HL or just to show the conten... Valentina Marioli

04:44 PM Task #9477: Create new Postgres Database

This database is needed for the development of a new sw component... I think it should be reachable only by our inter... Eric Perrone

04:17 PM Task #9477: Create new Postgres Database

Hi Eric, the schema is not a problem: you will have all the privileges to create/drop tables on the DB. But I need to... Andrea Dell'Amico

04:06 PM Task #9477: Create new Postgres Database

Hi, Andrea; I'm Eric a new member of the team.
This new DB is needed for the development environment.
However, ... Eric Perrone

03:54 PM Task #9477: Create new Postgres Database

From where do you need to access it?
Andrea Dell'Amico

11:10 AM Task #9477 (Closed): Create new Postgres Database

I need a new Postgres database for analytics dashboard, needed by SoBigData VO. Eric Perrone

04:24 PM Support #9276 (Closed): Database for TwitterMonitor

The ServiceEndpoint works correctly. Thanks. Salvatore Minutoli