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From May 15, 2017 to Jun 13, 2017

Jun 13, 2017

05:38 PM VRE #8933: Deploy preECO VRE for BlueEconomy Developments
The VRE is available https://pre.d4science.org/group/preeco we're still need to deploy the data miner service and the... Massimiliano Assante
04:55 PM VRE #8933 (Released): Deploy preECO VRE for BlueEconomy Developments
The preECO VRE should be used by BlueEconomy for their developments instead of the gcube development infra Massimiliano Assante
05:13 PM Task #8926 (Closed): Unbound content length for thredds
preconfigured pre and prod so that nginx will permit uploads up to 20GB. I didn't install the change because nginx is... Andrea Dell'Amico
02:22 PM Task #8926: Unbound content length for thredds
We can set it to 20GB, if we need more we can change it again later. It's a 10 seconds operations that does not stop ... Andrea Dell'Amico
01:58 PM Task #8926: Unbound content length for thredds
I agree it's quite drastic. Checking on production instance, the larger files are about 10GB, so maybe we can set... ... Fabio Sinibaldi
12:57 PM Task #8926 (Feedback): Unbound content length for thredds
Andrea Dell'Amico
12:57 PM Task #8926 (In Progress): Unbound content length for thredds
Yes, just done.
I'm not sure that disabling it altogether is the right choice, though
Andrea Dell'Amico
10:53 AM Task #8926 (Closed): Unbound content length for thredds
In order to support http upload of large files, we need to remove the limitation on http content-length introduced by... Fabio Sinibaldi
05:11 PM Task #8935 (Closed): Delete Statistical Service from the VRE Modeler resource in all VOs
The Statistical Service is still a functionality one can select in any environment. But we know it has been dismissed Massimiliano Assante
05:08 PM Task #8932 (Closed): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
The service is ready to use Roberto Cirillo
04:56 PM Task #8932 (In Progress): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Massimiliano Assante
04:48 PM Task #8932: Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Once ready you can check if everything works here: https://pre.d4science.org/group/preprod/vre-deployment Massimiliano Assante
04:43 PM Task #8932 (Closed): Deploy VRE Modeler service on /gcube/preprod Virtual Organisation
Massimiliano Assante
04:58 PM Task #8934 (Closed): Enable Data Miner service in the (preproduction) preECO VRE
Data Miner service in the preECO VRE should be equipped with I2S only algorithms Massimiliano Assante
10:29 AM Task #8893 (In Progress): Please Install Java 8 Oracle on datasciencepro instances to
Dev, staging and production is upgraded to Oracle java 8. Boro Jakimovski

Jun 12, 2017

05:47 PM Task #8911 (Closed): Deploy SmartExecutor plugins for TwitterMonitor
Here are the links for the SmartExecutor plugins to be deployed for the TwitterMonitor applications.
TwMonCron (ht...
Salvatore Minutoli
05:15 PM Incident #8900 (In Progress): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
Valentina Marioli
05:07 PM VM Creation #8755 (Feedback): Please Create VM to install Resource Registry - 2
The service has been provisioned. I see that haproxy passes its check, but I have a doubt about the orientdb user. I ... Andrea Dell'Amico
05:06 PM VM Creation #8753 (Feedback): Please Create VM to install Resource Registry - 1
The service has been provisioned. I see that haproxy passes its check, but I have a doubt about the orientdb user. I ... Andrea Dell'Amico
02:29 PM VM Creation #8907: geoserver-aquaculture-pre.d4science.org
geoserver-aquacultureatlas-pre.d4science.org rather than geoserver-aquaculture-pre.d4science.org Emmanuel Blondel
02:16 PM VM Creation #8907 (Closed): geoserver-aquaculture-pre.d4science.org
Please create said node (aliases can be used). GeoServer with spatialite extensions are needed. Fabio Sinibaldi
02:24 PM Task #8809: Deploy Twitter Monitor Smart Executor Plugin
So, we still have to wait for the plugins download URLs and for the PHP scripts so that we can provision them as well.
Andrea Dell'Amico

Jun 11, 2017

10:46 PM Incident #8903 (Closed): Cannot move shared folder into private folder
I hava a shared folder named MSC, Anton is the admin. I created a private folder (MSC Related) but when I try to move... Massimiliano Assante

Jun 10, 2017

10:45 AM Support #8901 (Closed): Run a script removing white spaces at the end of folder names (if any)
We had 2 incidents for the same reason in two days. The last one is related to a folder (name) 1 year old ,and from t... Massimiliano Assante
10:38 AM Incident #8900 (Closed): Not possible to open a Folder in BlueBridgeProject VRE Folder because of the white space at the end
If i try to access via Workspace his folder:
VRE Folders > BlueBridgeProject > Work Packages > WP5 Blue Assessmen...
Massimiliano Assante

Jun 09, 2017

07:46 PM Incident #8883 (Closed): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
Installed on the preprod and production servers too.
The new temporary directory is /tmp/nginx_temp, and a two level...
Andrea Dell'Amico
07:21 PM Incident #8883: Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
The new configuration is running on both dev2 and dev3. Can anybody test?
Andrea Dell'Amico
07:11 PM Incident #8883 (In Progress): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
I'm adding the config option `client_body_temp_path` http://nginx.org/en/docs/http/ngx_http_core_module.html#client_b... Andrea Dell'Amico
06:09 PM Incident #8898 (Closed): Issue overwriting a file
Valentina Marioli
06:06 PM Incident #8898 (Resolved): Issue overwriting a file
The issue has been fixed. Valentina Marioli
05:08 PM Incident #8898 (In Progress): Issue overwriting a file
Valentina Marioli
05:08 PM Incident #8898 (Closed): Issue overwriting a file
Overwriting a file, its public link changes. Valentina Marioli
05:57 PM Task #8696 (Rejected): Upgrade ubuntu version on dataminer[1-2]-d-d4s.d4science.org
This activity has been performed here: #8895 Roberto Cirillo
05:35 PM Incident #8886 (Closed): Private folder (not mine) in my workspace
The owner of myscripts folder has been changed to "massimiliano.assante". Valentina Marioli
11:06 AM Incident #8886 (In Progress): Private folder (not mine) in my workspace
Valentina Marioli
09:42 AM Incident #8886 (Closed): Private folder (not mine) in my workspace
I have a myscripts folder who's owner is an ICES instructor in my private workspace, not sure how but i remember I co... Massimiliano Assante
05:08 PM Task #8895 (Closed): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
OK Andrea Dell'Amico
05:00 PM Task #8895: Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
this is a known problem. The wps carries a xerces version that is not compatible with the one in the jre. For now I h... Lucio Lelii
04:22 PM Task #8895 (Feedback): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
Configured to run on the scopes
~~~
/gcube/devNext/NextNext, /gcube/devNext, /gcube/devsec, /gcube/devsec/devVre
...
Andrea Dell'Amico
03:54 PM Task #8895 (In Progress): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
@tommaso.piccioli@isti.cnr.it rebuilt the VMs.
The provisioning is running.
Andrea Dell'Amico
03:52 PM Task #8895 (Closed): Reinstall dataminer[1:2]-d-d4s.d4science.org with Ubuntu 14.04
And the dev version of dataminer, with the separate algorithms repository.
Andrea Dell'Amico
04:37 PM Task #8897: Install and configure 5 new Rstudio instances at GARR
The new instances are:
ip-90-147-166-61.ct1.garrservices.it
ip-90-147-166-170.ct1.garrservices.it
ip-90-147-166-...
Andrea Dell'Amico
04:36 PM Task #8897 (Closed): Install and configure 5 new Rstudio instances at GARR
Done.
Andrea Dell'Amico
04:24 PM Task #8897 (In Progress): Install and configure 5 new Rstudio instances at GARR
The provisioning is running.
Andrea Dell'Amico
04:23 PM Task #8897 (Closed): Install and configure 5 new Rstudio instances at GARR
With the same configuration of the running ones.
Andrea Dell'Amico
03:50 PM Task #8363 (Closed): We need a new dataminer distribution to build the EGI image
Andrea Dell'Amico
03:48 PM Task #8564 (Closed): Move tabulardata databases hosted on node7.d to postgresql-srv-dev
database migrated, the old VM has been stopped by @tommaso.piccioli@isti.cnr.it Andrea Dell'Amico
03:14 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Massimiliano Assante wrote:
> Andrea, they are going to need to contact also D4Science clusters such as Cassandra an...
Andrea Dell'Amico
03:04 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
Andrea, they are going to need to contact also D4Science clusters such as Cassandra and MongoDB and jackrabbit reposi... Massimiliano Assante
02:57 PM Task #8875: Enable VPN for external gCube Liferay Portal instance (EDISON)
A VPN is overkill for this kind of activity. As soon as we have the IP addresses that need access, I'll grant access ... Andrea Dell'Amico
03:00 PM Task #8891 (Paused): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
Paused until Task #8893: Please Install Java 8 Oracle on datasciencepro instances Massimiliano Assante
02:41 PM Task #8891 (Closed): Setup dev.datasciencepro.eu to work on D4Science preprod infrastructure
The dev.datasciencepro.eu is the portal EDISON Project is going to use for development of their applications.
It s...
Massimiliano Assante
02:59 PM Task #8893 (Closed): Please Install Java 8 Oracle on datasciencepro instances to
Dear Boro,
sorry to inform you we migrated to Java 8 Oracle just yesterday (on production). So any datasciencepro i...
Massimiliano Assante
02:48 PM Task #8877 (Closed): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Andrea Dell'Amico
02:45 PM Task #8892 (Closed): Authorize dev.datasciencepro.eu (194.149.136.225) on /gcube
dev.datasciencepro.eu (194.149.136.225) is an external node part of the EGI Federation Massimiliano Assante
12:21 PM Task #8849 (Closed): Please produce release notes for gCube 4.5.0
Nikolas Laskaris
12:20 PM Task #8849: Please produce release notes for gCube 4.5.0
Please, find the news for gCube 4.5.0 release on the following link
https://goo.gl/Bd17Kx
in markdown format, as us...
Nikolas Laskaris
11:43 AM Task #8849 (In Progress): Please produce release notes for gCube 4.5.0
Nikolas Laskaris
11:57 AM Incident #8887 (Closed): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
Problem is fixed renaming the folder however we are opening an enhancement because the folder names should be trimmed... Massimiliano Assante
11:19 AM Incident #8887 (In Progress): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
the problem may be related to the fact that the folder name ends with a white space "Aqua-alert " Massimiliano Assante
11:15 AM Incident #8887 (Closed): Not possible to open a Folder in Blue-Datathon VRE Folder (Datasets > Aqua-Alert)
If i try to access via Workspace his folder:
Workspace > VRE Folders > Blue-Datathon > Datasets
i get Sorry, a...
Massimiliano Assante
10:34 AM Incident #8882 (Closed): social networking service: messages methods do not work after 4.5 upgrade
Problem solved. A wrong version was deployed in prod Costantino Perciante

Jun 08, 2017

07:56 PM Upgrade #8870 (Completed): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8870 (In Progress): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8869 (Completed): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
07:56 PM Upgrade #8869 (In Progress): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
07:54 PM Upgrade #8868 (In Progress): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
07:53 PM Upgrade #8867 (Completed): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
07:52 PM Upgrade #8867 (In Progress): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
07:51 PM Upgrade #8866 (Completed): Edison VO upgrade to gCube 4.5
Roberto Cirillo
07:50 PM Upgrade #8866 (In Progress): Edison VO upgrade to gCube 4.5
Roberto Cirillo
07:48 PM Upgrade #8863 (Completed): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
07:47 PM Upgrade #8865 (Completed): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
07:45 PM Upgrade #8865 (In Progress): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
07:44 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
I've download the latest available build from etics http://eticsbuild2.research-infrastructures.eu/BuildReport/bdownl... Costantino Perciante
07:23 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
Messages is now working fine, not sure what was before but we didn't touch anything Massimiliano Assante
06:49 PM Incident #8882: social networking service: messages methods do not work after 4.5 upgrade
Also, it seems that Messages cannot be send from the Messages portlet, it looks like more a HL or JackRabbit repo issue Massimiliano Assante
06:34 PM Incident #8882 (Closed): social networking service: messages methods do not work after 4.5 upgrade
log reports
~~~
18:18:11.665 [catalina-exec-3] INFO RequestAccounting: REQUEST START ON SocialNetworking:Portal(...
Costantino Perciante
06:35 PM Incident #8883 (Closed): Nginx portal cluster change for supporting large file upload must be reviewed as nginx would not start
It seems We just had a problem with the editing made by @tommaso.piccioli@isti.cnr.it to make nginx support large fi... Massimiliano Assante
06:35 PM Task #8751 (Feedback): HA Proxy Instance for resource registry service
Done. There's no http -> https redirection. Do we need it? Andrea Dell'Amico
03:59 PM Task #8751: HA Proxy Instance for resource registry service
HEAD/GET /resource-registry/access/schema/Facet?polymorphic=false&gcube-token=XXXX
Luca Frosini
01:04 PM Task #8751: HA Proxy Instance for resource registry service
We need a URL that haproxy can check regularly and very frequently (each second or less) to know the status of the se... Andrea Dell'Amico
12:48 PM Task #8751 (In Progress): HA Proxy Instance for resource registry service
The hostname is going to be resource-registry.d4science.org Andrea Dell'Amico
06:34 PM Task #8881: DataMiner - Install FP-growth on DataMiner services
Always assign the tickets to the sysadmins group, please.
Andrea Dell'Amico
06:32 PM Task #8881 (Closed): DataMiner - Install FP-growth on DataMiner services
We need to install FP-growth (Frequent Item Set Mining http://borgelt.net/fpgrowth.html) software on DataMiner servic... Giancarlo Panichi
06:34 PM Task #8752 (Feedback): HA Proxy Instance for accounting service
Luca Frosini wrote:
> I have to change the library to use the HAProxy instead of the Service directly. In the next d...
Andrea Dell'Amico
06:31 PM Task #8752: HA Proxy Instance for accounting service
I have to change the library to use the HAProxy instead of the Service directly. In the next days I'll do it and I'll... Luca Frosini
06:22 PM Task #8752 (In Progress): HA Proxy Instance for accounting service
Done. There's no http -> https redirection. Do we need it?
Andrea Dell'Amico
04:47 PM Task #8752: HA Proxy Instance for accounting service
We usually use a *guest* token for this kind of activities. @lucio.lelii@isti.cnr.it is going to look at it Andrea Dell'Amico
04:46 PM Task #8752: HA Proxy Instance for accounting service
I think that it is the only way to go. We need to register a service endpoint for Nagios. Then we will generate an ap... Pasquale Pagano
04:22 PM Task #8752: HA Proxy Instance for accounting service
@pasquale.pagano@isti.cnr.it what do you think about an application token used by checks Luca Frosini
04:21 PM Task #8752: HA Proxy Instance for accounting service
Regarding the token we can generate an application token to be used in all checks. Luca Frosini
04:20 PM Task #8752: HA Proxy Instance for accounting service
GET/HEAD /accounting-service/gcube/service/status/getStatus?gcube-token=XXXXXX Luca Frosini
01:04 PM Task #8752: HA Proxy Instance for accounting service
We need a URL that haproxy can check regularly and very frequently (each second or less) to know the status of the se... Andrea Dell'Amico
05:57 PM Upgrade #8864 (Completed): FARM VO upgrade to gCube 4.5
Roberto Cirillo
04:17 PM Upgrade #8864 (In Progress): FARM VO upgrade to gCube 4.5
Roberto Cirillo
05:18 PM Upgrade #8650 (Completed): D4Science Gateways upgrade to gCube 4.5
Massimiliano Assante
04:45 PM Upgrade #8650 (In Progress): D4Science Gateways upgrade to gCube 4.5
Massimiliano Assante
04:45 PM Task #8877 (Feedback): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Done. Available over http and https.
Andrea Dell'Amico
04:28 PM Task #8877 (In Progress): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Andrea Dell'Amico
03:55 PM Task #8877: intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
the container must join the following scopes: /gcube, /gcube/devsec, /gcube/devNext with the authorizeChildrenContex... Lucio Lelii
03:53 PM Task #8877 (Closed): intall Smartgear dotrobution with DataTrasfer on access-d.d4science.org
Lucio Lelii
04:40 PM Task #8878 (Closed): Migrate portal cluster nodes to Java 8
Tommaso kindly performed this task Massimiliano Assante
04:24 PM Task #8878 (Closed): Migrate portal cluster nodes to Java 8
infra-gateway and infra-gateway1 .d4science.org should be migrated to Java 8 Massimiliano Assante
04:24 PM Upgrade #8648: D4Science Infrastructure Upgrade to gCube 4.5
due to changes in a related task Massimiliano Assante
03:57 PM Task #8564: Move tabulardata databases hosted on node7.d to postgresql-srv-dev
The tabulardata and tabularmetadata databases have been restored on postgresql-srv-dev.d4science.org.
Andrea Dell'Amico
02:30 PM Task #8875 (Closed): Enable VPN for external gCube Liferay Portal instance (EDISON)
The current VM edison.d4science.org (dev3.d4science.org) hosting one instance of gCube Liferay Portal for the EDISON ... Massimiliano Assante
01:19 PM Incident #8873 (Closed): To many connections from node9-d-d4s to couchbase01.d.d4s
It was due to a temporary test by Luca. Tommaso Piccioli

Jun 07, 2017

07:32 PM Task #8750 (In Progress): Create Accounting Service Cluster
Andrea Dell'Amico
07:31 PM Task #8749 (In Progress): Create Resource Registry Cluster
Andrea Dell'Amico
07:26 PM Task #8752: HA Proxy Instance for accounting service
We're going to use the infra load balancer for this service. It has plenty of resources and it's in HA.
Andrea Dell'Amico
07:26 PM Task #8751: HA Proxy Instance for resource registry service
We're going to use the infra load balancer for this service. It has plenty of resources and it's in HA.
Andrea Dell'Amico
06:29 PM VM Creation #8855 (Feedback): Create a clone of CKAN instance for BB
The VM has been configured. The scopes are:
~~~
/d4science.research-infrastructures.eu/gCubeApps
/d4science.rese...
Andrea Dell'Amico
06:27 PM VM Creation #8854 (Feedback): Create a clone of CKAN instance for SBD
The instance has beed configured.
Note that I added the three scopes that are present on ckan-sobigdata.d4science.or...
Andrea Dell'Amico
06:19 PM Upgrade #8870 (Planned): OpenAIRE VO upgrade to gCube 4.5
Nothing to upgrade Roberto Cirillo
09:36 AM Upgrade #8870 (Completed): OpenAIRE VO upgrade to gCube 4.5
Roberto Cirillo
06:17 PM Upgrade #8869 (Planned): SoBigData VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:35 AM Upgrade #8869 (Completed): SoBigData VO upgrade to gCube 4.5
Roberto Cirillo
06:16 PM Upgrade #8867 (Planned): SmartArea VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:34 AM Upgrade #8867 (Completed): SmartArea VO upgrade to gCube 4.5
Roberto Cirillo
06:11 PM Upgrade #8866 (Planned): Edison VO upgrade to gCube 4.5
Roberto Cirillo
06:11 PM Upgrade #8866: Edison VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org: install catalogue-ws service
...
Roberto Cirillo
09:34 AM Upgrade #8866 (Completed): Edison VO upgrade to gCube 4.5
Roberto Cirillo
06:08 PM Upgrade #8864 (Planned): FARM VO upgrade to gCube 4.5
Roberto Cirillo
10:43 AM Upgrade #8864: FARM VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** catalogue-ws.d4science.org
* **(CNR) DONE** smart-grsf-d...
Roberto Cirillo
09:33 AM Upgrade #8864 (Completed): FARM VO upgrade to gCube 4.5
Roberto Cirillo
06:06 PM Upgrade #8868 (Planned): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
12:36 PM Upgrade #8868: D4Research VO upgrade to gCube 4.5
**Hosting Nodes**
*GHN to upgrade*
* resourcemanager-d4research.d4science.org
*WHN to upgrade*
* **(CNR...
Roberto Cirillo
09:35 AM Upgrade #8868 (Completed): D4Research VO upgrade to gCube 4.5
Roberto Cirillo
06:04 PM Upgrade #8865 (Planned): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
12:26 PM Upgrade #8865: gCubeApps VO upgrade to gCube 4.5
**Hosting Nodes**
*WHN to upgrade*
* **(CNR) DONE** accounting-service-1.d4science.org
* **(CNR) DONE** ac...
Roberto Cirillo
09:33 AM Upgrade #8865 (Completed): gCubeApps VO upgrade to gCube 4.5
Roberto Cirillo
05:53 PM VM Creation #8756 (Closed): Please Create VM to install Accounting Service - 2
Roberto Cirillo
05:52 PM VM Creation #8754 (Closed): Please Create VM to install Accounting Service - 1
Roberto Cirillo
05:51 PM VM Creation #8767 (Closed): Provide a new machine for the catalogue-ws
Roberto Cirillo
05:23 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
I'll work on this task after the upgrade planned for tomorrow. The new VO will be ready in the next week. Wednesday 1... Roberto Cirillo
04:58 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
@roberto.cirillo@isti.cnr.it , can you provide an estimated date for the creation of this VO (which is not going to r... Massimiliano Assante
04:37 PM Upgrade #8863 (In Progress): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
04:37 PM Upgrade #8863 (Planned): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
10:31 AM Upgrade #8863: D4Science Root VO upgrade to gCube 4.5
**HostingNode**
* **(CNR) DONE** data.d4science.org
* **(CNR) DONE** data2-d4s.d4science.org
*WHN to upgrade...
Roberto Cirillo
09:32 AM Upgrade #8863 (Completed): D4Science Root VO upgrade to gCube 4.5
Roberto Cirillo
04:09 PM Incident #8873 (Closed): To many connections from node9-d-d4s to couchbase01.d.d4s
Every 10 minutes node9-d-d4s.d4science.org tries to open connections to couchbase01-d-d4.d4science.org but there is s... Tommaso Piccioli
02:38 PM VRE #8872 (Released): Create a VRE for E-RIHS
Leonardo Candela
01:29 PM VRE #8872 (Available): Create a VRE for E-RIHS
The VRE is available at https://services.d4science.org/group/e-rihs Leonardo Candela
12:45 PM VRE #8872 (Planned): Create a VRE for E-RIHS
Leonardo Candela
12:43 PM VRE #8872 (Released): Create a VRE for E-RIHS
This VRE is for supporting the European Research Infrastructure on Heritage Science
The VRE is mainly conceived to...
Leonardo Candela
10:47 AM Upgrade #8730 (Completed): /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
Roberto Cirillo
09:27 AM Incident #8860 (Closed): Sharing of post does not handle eventual consistency properly
Costantino Perciante
09:26 AM Incident #8860 (In Progress): Sharing of post does not handle eventual consistency properly
I have analysed the flow of execution of the code when a user writes a post, and taking into account the fact that @a... Costantino Perciante

Jun 06, 2017

07:32 PM VM Creation #8855 (In Progress): Create a clone of CKAN instance for BB
ckan-bb2.d4science.org running with 6 GB of ram and 16 Gb of disk at the moment. Tommaso Piccioli
04:12 PM VM Creation #8855 (Closed): Create a clone of CKAN instance for BB
As a result of tests performed in Task #8425 in order to solve the issue (reduce loading time of dataset pages), the ... Francesco Mangiacrapa
07:32 PM VM Creation #8854 (In Progress): Create a clone of CKAN instance for SBD
ckan-sobigdata2.d4science.org running with 6 GB of ram and 16 Gb of disk at the moment. Tommaso Piccioli
03:30 PM VM Creation #8854 (Closed): Create a clone of CKAN instance for SBD
As a result of tests performed in Task #8425 in order to solve the issue (reduce loading time of dataset pages), the ... Francesco Mangiacrapa
07:13 PM Incident #8860: Sharing of post does not handle eventual consistency properly
Here the exception
~~~
2017-06-06 14:23:46,973 INFO server.ShareUpdateServiceImpl [http-bio-9090-exec-124,shareP...
Massimiliano Assante
07:13 PM Incident #8860 (Closed): Sharing of post does not handle eventual consistency properly
The user Anna shared a post on the VRE /d4science.research-infrastructures.eu/D4Research/ICES_AbundanceEstimationFrom... Massimiliano Assante
05:54 PM Task #8858: Monitor OrientDB instances
Please note that due to OrientDB bug I found we need to currently run with just one node.
https://github.com/orien...
Luca Frosini
05:50 PM Task #8858 (Closed): Monitor OrientDB instances
Orient DB instances must be monitored by using all oru checks: Ganglia, Munin, Nagios.
The nodes already appear in...
Luca Frosini
05:48 PM VM Creation #8767: Provide a new machine for the catalogue-ws
renamed to catalogue-ws.d4science.org Tommaso Piccioli
05:02 PM VM Creation #8767 (In Progress): Provide a new machine for the catalogue-ws
catalogue-ws-d4s.d4science.org is running. Tommaso Piccioli
05:43 PM VM Creation #8756 (In Progress): Please Create VM to install Accounting Service - 2
accounting-service2.d4science.org is running Tommaso Piccioli
05:42 PM VM Creation #8754 (In Progress): Please Create VM to install Accounting Service - 1
accounting-service1.d4science.org is running Tommaso Piccioli
05:41 PM VM Creation #8755: Please Create VM to install Resource Registry - 2
renamed to resource-registry2.d4science.org Tommaso Piccioli
05:06 PM VM Creation #8755 (In Progress): Please Create VM to install Resource Registry - 2
resourceregistry2-d4s.d4science.org is running. Tommaso Piccioli
05:41 PM VM Creation #8753: Please Create VM to install Resource Registry - 1
renamed to resource-registry1.d4science.org Tommaso Piccioli
05:04 PM VM Creation #8753 (In Progress): Please Create VM to install Resource Registry - 1
resourceregistry1-d4s.d4science.org is running. Tommaso Piccioli
05:33 PM Task #8778: Accounting Status in Production
Monthly aggregation was not scheduled.
@pasquale.pagano@isti.cnr.it as we agreed monthly aggregation will be sche...
Luca Frosini
04:42 PM Task #8778: Accounting Status in Production
Last Monthly aggregation was made at 17/05/2017 and the last day was 17/11/2016.
Going to investigate why is not r...
Luca Frosini
05:03 PM VM Creation #8779 (In Progress): Create new VM for ResourceManager on D4Research
resourcemanager-d4research.d4science.org is running. Tommaso Piccioli
02:14 PM Task #8787 (Closed): mongo2-d-d4s: is not synchronized with other cluster members
mongo2-d-d4s is now aligned with the cluster. Roberto Cirillo

Jun 05, 2017

06:03 PM Task #8849: Please produce release notes for gCube 4.5.0
I opened the same ticket on gCube project (#8813) few days ago and I forgot to add you as watcher, sorry Gabriele Giammatteo
06:00 PM Task #8849 (Closed): Please produce release notes for gCube 4.5.0
Massimiliano Assante
05:58 PM Upgrade #8848 (Completed): Preprod Gateway upgrade to gCube 4.5 (Community Apps)
Massimiliano Assante
05:52 PM Upgrade #8848 (Completed): Preprod Gateway upgrade to gCube 4.5 (Community Apps)
Massimiliano Assante
05:54 PM Task #8394: gcore ansible roles for testing
ETICS integration for automated testing has been completed. Daniele Pavia
05:52 PM Upgrade #8709 (Completed): Preprod Gateway upgrade to gCube 4.5 (Common Apps)
Massimiliano Assante
05:49 PM Upgrade #8650 (Planned): D4Science Gateways upgrade to gCube 4.5
Massimiliano Assante
03:39 PM Task #8735 (Feedback): create a new database in the postgresql dev cluster
Andrea Dell'Amico
10:47 AM Task #8778: Accounting Status in Production
Job : 98,294
Portlet : 0
Service : 18,993,152
Storage : 1,617,009
Storage Status : 128,379
Task : 203
Latest ...
Luca Frosini
10:30 AM Task #8845 (Closed): dataminer3-p-d4s: Too Many open file
It's needed to understand why the maximum number of open file has been reached and if it should be increased.
In a...
Roberto Cirillo
09:35 AM Task #8844 (Closed): sharelatex: problem to contact whn-manager service
I've tried to add the resource to FAO_TunaAtlas scope but unfortunately I've a connection refused:
~~~
2017-05-31...
Roberto Cirillo

Jun 02, 2017

03:31 PM Task #8103 (Closed): a nagios script must be scheduled every 24 h to add a list of resources to all scopes
Done. The check goes to CRITICAL if the `/home/gcube/missing_resources/identifiers` file contains anything different ... Andrea Dell'Amico

May 31, 2017

06:17 PM Task #8809: Deploy Twitter Monitor Smart Executor Plugin
I need to deploy two plugins: TwMonCron and TwMonCrawler.
One of them uses some PHP scripts that must be deployed on...
Salvatore Minutoli
04:32 PM Task #8809 (Closed): Deploy Twitter Monitor Smart Executor Plugin
The plugin (a jar-with-dependencies) can be downloaded by using a link to a resource in a shared folder I already cre... Luca Frosini
03:34 PM Incident #8806 (Closed): Dev (and Preprod) MongoDB Cluster is broken
The mongodb cluster now is ready to use. Roberto Cirillo
03:22 PM Incident #8806 (Closed): Dev (and Preprod) MongoDB Cluster is broken
The Dev (and Preprod) MongoDB Cluster is not working. Since the development instance is used for preproduction too th... Massimiliano Assante
02:18 PM Task #8426 (Closed): Dataminer service to test : dataminer2-d-d4s.d4science.org
It's not needed to test all the dataminer instances. One dataminer instance has been successfully tested here: #8424
...
Roberto Cirillo
02:02 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
The dataminer is not in the RPrototypingLab scope, thus I cannot test the Java 8 consistency. Gianpaolo Coro

May 30, 2017

06:29 PM Task #8787: mongo2-d-d4s: is not synchronized with other cluster members
Roberto Cirillo wrote:
> Now, I've started on mongo2-d a resync from scratch. In this way all the payloads will be...
Roberto Cirillo
05:55 PM Task #8787: mongo2-d-d4s: is not synchronized with other cluster members
After the rsync unfortunately, we have an ERROR on mongodb log:
~~~
2017-05-30T17:27:00.203+0200 I CONTROL *****...
Roberto Cirillo
12:24 PM Task #8787 (In Progress): mongo2-d-d4s: is not synchronized with other cluster members
I've removed mongo2 from the development cluster and now @tommaso.piccioli@isti.cnr.it is performing a resynch. When ... Roberto Cirillo
12:15 PM Task #8787 (Closed): mongo2-d-d4s: is not synchronized with other cluster members
mongo2-d-d4s was down from 26 May for an OutOfMemory problem.
Now it's needed to perform a full resynch
Roberto Cirillo
03:14 PM Task #8380 (In Progress): Testing activities on the development infrastructure with Java 8
Maria Di Girolamo
03:12 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
Any news for this test? Maria Di Girolamo
03:08 PM Task #8434: tabular-data-manager service to test : tabulardata-devsec.org
Any new about this test? Maria Di Girolamo
02:13 PM Incident #8790 (Rejected): Links to BlueBRIDGE Data catalogue takes ages (more than 15 seconds) to display
We know the problem #8425
At the moment, unfortunately, loading time to render a catalogue item is very high.
We ar...
Francesco Mangiacrapa
12:53 PM Incident #8790 (Rejected): Links to BlueBRIDGE Data catalogue takes ages (more than 15 seconds) to display
this link (and any other) https://services.d4science.org/group/bluebridgeproject/data-catalogue?path=/dataset/bluebri... Massimiliano Assante
12:52 PM Task #8789 (Closed): Please create new email account for the BluebRIDGE Datathon
Tommaso Piccioli
12:42 PM Task #8789 (Closed): Please create new email account for the BluebRIDGE Datathon
blue-datathon at d4s Massimiliano Assante
12:30 PM Incident #8785 (Closed): collector-openare: Too Many Open File
Roberto Cirillo
12:09 PM Incident #8785 (In Progress): collector-openare: Too Many Open File
Roberto Cirillo
12:04 PM Incident #8785 (Closed): collector-openare: Too Many Open File
It's needed to increase the max number of open file to 64000 for gcube user on collector-openaire.d4science.org Roberto Cirillo

May 29, 2017

05:24 PM Task #8778 (In Progress): Accounting Status in Production
Job : 98,291
Portlet : 0
Service : 18,765,037
Storage : 1,609,561
Storage Status : 115,288
Task : 179
Latest ...
Luca Frosini
02:54 PM Task #8778 (Closed): Accounting Status in Production
Please provide an update every week of the status of the accounting. It could be very useful to report systematically... Pasquale Pagano
03:26 PM VM Creation #8779 (Closed): Create new VM for ResourceManager on D4Research
In order to avoid heap space problem it's needed to transfer the ResourceManager gCore service from "node66.p.d4scien... Roberto Cirillo
03:12 PM Task #8040: Impossible to produce DWCA for a number of Families
Shall we continue to investigate this issue? We will need to periodically update our resources and we cannot lose wee... Gianpaolo Coro

May 26, 2017

05:16 PM Task #8424 (Closed): Dataminer service to test : dataminer1-d-d4s.d4science.org.
OK, it works! All the tests are passed. Gianpaolo Coro
02:22 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
There was an old library uri-resolver-manager. I've just updated it and now it works fine. Please, could you retry? Roberto Cirillo
04:58 PM Support #8764 (Closed): assign permissions to a folder
There was a bug portlet side. The fix will be released in gCube 4.5. Valentina Marioli
08:40 AM Support #8764: assign permissions to a folder
Checked now, same problem.
The folder I tested is:
GEMex/WP3/Task3.1/test_folder
I tried yesterday the same in E...
Eugenio Trumpy
12:27 PM Support #8549 (Closed): enable rights to edit tickets or wiki
Massimiliano Assante
12:19 PM Support #8549: enable rights to edit tickets or wiki
it's fixed for Anne Elise, she can edit now.
Thank you.
Julien Barde
11:32 AM Support #8549: enable rights to edit tickets or wiki
Anne Elise told me she still can't edit the wiki.
Is she a member of the BlueBRIDGEProject VRE ?
If not, how can sh...
Julien Barde
11:52 AM Task #8752: HA Proxy Instance for accounting service
According with our policies we should call it: accounting-service.d4science.org Roberto Cirillo
11:46 AM VM Creation #8756: Please Create VM to install Accounting Service - 2
we should call the new VM as following: accounting-service-2.d4science.org Roberto Cirillo
11:46 AM VM Creation #8754: Please Create VM to install Accounting Service - 1
we should call the new VM as following: accounting-service-1.d4science.org Roberto Cirillo
10:57 AM VM Creation #8767 (Closed): Provide a new machine for the catalogue-ws
Roberto Cirillo
10:48 AM Task #8750: Create Accounting Service Cluster
due to changes in a related task Roberto Cirillo
10:40 AM Upgrade #8730 (In Progress): /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
Roberto Cirillo
10:39 AM Upgrade #8730 (Planned): /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
Roberto Cirillo

May 25, 2017

05:19 PM Support #8764: assign permissions to a folder
Which folder did you share? Please @e.trumpy@igg.cnr.it , could you try to set permissions again? Valentina Marioli
04:29 PM Support #8764 (In Progress): assign permissions to a folder
Massimiliano Assante
04:12 PM Support #8764 (Closed): assign permissions to a folder
In a created folder, I tried to assign a grant to a VRE member getting a general error.
The operation fails.
Eugenio Trumpy
03:17 PM VM Creation #8756 (Closed): Please Create VM to install Accounting Service - 2
Luca Frosini
03:17 PM VM Creation #8755 (Closed): Please Create VM to install Resource Registry - 2
Luca Frosini
03:16 PM VM Creation #8754 (Closed): Please Create VM to install Accounting Service - 1
Luca Frosini
03:11 PM VM Creation #8753 (Closed): Please Create VM to install Resource Registry - 1
Luca Frosini
03:07 PM Task #8752 (Closed): HA Proxy Instance for accounting service
I think we can reuse the VM of accounting-d4s.d4science.org Luca Frosini
03:06 PM Task #8751 (Closed): HA Proxy Instance for resource registry service
Luca Frosini
03:03 PM Task #6971 (Closed): Dissmiss CouchDB production cluster when after the release 4.3.0 is deployed on prodution
Roberto Cirillo
02:54 PM Task #6971: Dissmiss CouchDB production cluster when after the release 4.3.0 is deployed on prodution
This machine is still responding:
accounting-d4s.d4science.org
couchdb instances seems down.
You can dismiss acc...
Luca Frosini
03:02 PM Task #8750 (Closed): Create Accounting Service Cluster
Luca Frosini
03:00 PM Task #8749 (Closed): Create Resource Registry Cluster
Luca Frosini
11:29 AM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
I have issues on the dataminer service when interacting with the SDI:
Running the following URL (publishes a CSV on ...
Gianpaolo Coro
10:45 AM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
Doing tests right now. Gianpaolo Coro
10:38 AM Task #8735: create a new database in the postgresql dev cluster
"accessible from everywhere" means without restrictions, it will be used to test the dataminer's algorithms from Phil... Lucio Lelii
09:39 AM Upgrade #8730: /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
**Hosting Nodes**
* **(CNR) DONE** data-d.d4science.org
*GHN to dismiss*
* **NO NEED** thredds-pre-d4s.d4...
Roberto Cirillo

May 24, 2017

07:56 PM Task #8735 (In Progress): create a new database in the postgresql dev cluster
Is dmalgorithms the desired name?
What does "accessible from everywhere" means?
Every server and network already...
Tommaso Piccioli
05:06 PM Task #8735 (Closed): create a new database in the postgresql dev cluster
DatabaseName : dmalgotithms
please specify user and password to access it.
It must be accessible from everywhere.
Lucio Lelii
05:11 PM Task #8673: Reconfigure the authorization clients in dev to use https://auth-d.dev.d4science.org/ as the URL for the authentication service
The configuration is set to the new endpoint, we have to change the authorization-endpoint.xml in the services of the... Lucio Lelii
04:43 PM Upgrade #8730 (Completed): /gcube/preprod upgrade to gCube 4.5.0 (Common Apps)
Roberto Cirillo
04:28 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
I've deployed dataminer1-d-d4s on RPrototypingLab VRE. Please, @gianpaolo.coro@isti.cnr.it could you test it? Roberto Cirillo
04:06 PM Task #8707 (Closed): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Pasquale Pagano
03:59 PM Task #8707 (In Progress): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
@levi.westerveld@gmail.com, the current issues are the results of an automatic update of the algorithm and its depend... Pasquale Pagano
11:56 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Hi. I ran a few tests and it seems to be working. I think we can close the ticket. Thanks for the immediate attention... Levi Westerveld
09:56 AM Task #8707 (Feedback): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
The problem was on a dataminer instance of the PAIM's cluster. I've removed it from the cluster and now it seems to w... Roberto Cirillo
09:35 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
I've executed right now the algorithm successfully. The problem is still there for you? Could you re-try please? Roberto Cirillo
12:50 PM Upgrade #8709 (In Progress): Preprod Gateway upgrade to gCube 4.5 (Common Apps)
Massimiliano Assante
09:48 AM VM Creation #8716 (Closed): GeoServer dedicated VM for protectedareaimpactmaps
Fabio Sinibaldi

May 23, 2017

04:16 PM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Just FYI, I was able to run the algorithm through the VRE an hour ago on the French EEZ and it worked. I tried again ... Levi Westerveld
12:01 PM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
I understand. Thanks for the update. Levi Westerveld
11:52 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Hi Levi, the issue is the one reported by Emmanuel, this ticket will be automatically closed when the parent ticket w... Gianpaolo Coro
11:45 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
I just ran it again (I saw this ticket was set to 100% and Feedback) but the issue remains on DataMiner.
The compu...
Levi Westerveld
11:16 AM Task #8707 (In Progress): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Gianpaolo Coro
11:15 AM Task #8707 (Feedback): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Gianpaolo Coro
11:14 AM Task #8707 (In Progress): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Gianpaolo Coro
10:25 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
@levi.westerveld@gmail.com I've reported this in #7323 for which i suspect the RFigisGeo package was not re-installed... Emmanuel Blondel
07:53 AM Task #8707: PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
I tried to save the algorithm and republish it but this did not solve the issue.
@emmanuel.blondel@fao.org, I jus...
Levi Westerveld
07:35 AM Task #8707 (Closed): PAIM VRE MPA Intersect algorithm returns error instantly in DataMiner.
Hello. As far as I know, no changes where made to the MPA Intersect algorithm using the SAI, however, as of yesterday... Levi Westerveld
02:04 PM Task #8674 (Closed): Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
Tommaso Piccioli
01:37 PM Task #8674: Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
Thanks, Geoserver layer preview now works well (using http). I believe we can close this ticket, but note you may wan... Emmanuel Blondel
01:29 PM Task #8674 (In Progress): Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
Now the proxy on geoserver-tunaatlas.d4science.org works on port 80 (http)
could you plese test it again?
Tommaso Piccioli
01:02 PM Task #8674: Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
please @tommaso.piccioli@isti.cnr.it reply to this request. Pasquale Pagano
01:50 PM Task #8692 (Closed): Provide root access to workspace-repository-prod and workspace-repository-prod1
Massimiliano Assante
01:07 PM Task #8692: Provide root access to workspace-repository-prod and workspace-repository-prod1
please @tommaso.piccioli@isti.cnr.it provide access to those machines. Pasquale Pagano
11:34 AM Task #2174 (Closed): Dataminer and Statistical Manager packages
Since this update is going to become fully automatic, the list of packages will be maintained on SVN only:
https:/...
Gianpaolo Coro
11:23 AM Upgrade #8709 (Completed): Preprod Gateway upgrade to gCube 4.5 (Common Apps)
Massimiliano Assante
11:19 AM Task #8555: Please provide more resource to Redmine
Redmine performances are degrading day by day Luca Frosini

May 22, 2017

11:09 AM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
the issues in starting up the repo after the migration is completed have been fixed by running a consistency check Massimiliano Assante

May 19, 2017

05:58 PM Task #8454 (Closed): Smart Executor to test : node19.d4science.org
Luca Frosini
03:07 PM Task #8454 (In Progress): Smart Executor to test : node19.d4science.org
Luca Frosini
05:57 PM Task #8452 (Closed): Smart Executor to test : node6.d4science.org
Luca Frosini
03:07 PM Task #8452 (In Progress): Smart Executor to test : node6.d4science.org
Luca Frosini
05:57 PM Task #8451 (Closed): Smart Executor to test : smartexecutor1-d-d4s.d4science.org
Luca Frosini
03:07 PM Task #8451 (In Progress): Smart Executor to test : smartexecutor1-d-d4s.d4science.org
Luca Frosini
05:57 PM Task #8449 (Closed): Resource Registry (New IS) to test : resourceregistry1-d.d4science.org
Luca Frosini
03:07 PM Task #8449 (In Progress): Resource Registry (New IS) to test : resourceregistry1-d.d4science.org
Luca Frosini
05:48 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
It's either success or exception...no need to understand. Gianpaolo Coro
05:18 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
I ran the getCapability command and it worked, since I'm not responsible for the algorithms I cannot guarantee they w... Lucio Lelii
04:42 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
I cannot validate those tests from the ticket reported by @gianpaolo.coro@isti.cnr.it because I'm responsible of the ... Lucio Lelii
04:29 PM Task #8424: Dataminer service to test : dataminer1-d-d4s.d4science.org.
The testing has been made automatic with the links reported in #8367. I can do my tests after these ones have been su... Gianpaolo Coro
05:17 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
I ran the getCapability command and it worked, since I'm not responsible for the algorithms I cannot guarantee they w... Lucio Lelii
04:46 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
Lucio, the tests give either success or an exception. It is simple. Gianpaolo Coro
04:40 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
I cannot validate those tests from the ticket reported by @gianpaolo.coro@isti.cnr.it because I'm responsible of the ... Lucio Lelii
04:31 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
The testing has been made automatic with the links reported in #8367. I can do my tests after these ones have been su... Gianpaolo Coro
02:37 PM Task #8426: Dataminer service to test : dataminer2-d-d4s.d4science.org
It starts normally without errors.
@gianpaolo.coro@isti.cnr.it please perform some tests to check if also the functi...
Lucio Lelii
05:09 PM Task #8453 (Closed): Smart Executor to test : node17.d4science.org
Luca Frosini
03:07 PM Task #8453 (In Progress): Smart Executor to test : node17.d4science.org
Luca Frosini
03:27 PM Task #8440 (Closed): RConnector to test : rstudio-dev.d4science.org
Lucio Lelii
03:20 PM Task #8434 (In Progress): tabular-data-manager service to test : tabulardata-devsec.org
Lucio Lelii
03:19 PM VM Creation #7702 (In Progress): Provide new VM for hosting tabulardata service in devsec VO
the backup of th eold database is still missing, tabulardata cannot work with it. Lucio Lelii
02:51 PM Task #8438 (Closed): species-product-discovery to test : spd-devsec.d4science.org
Lucio Lelii
02:41 PM Task #8439 (Closed): ckan-connector to test : ckan-d-d4s.d4science.org
Lucio Lelii
02:29 PM Task #8446 (Closed): DataManager Pool Manager Service to test : node2-d-d4s.d4science.org
DataManager Pool Manager Service works fine. Nunzio Andrea Galante
02:27 PM Task #8445 (Closed): FHNManager Service to test : node2-d-d4s.d4science.org
Nunzio Andrea Galante
02:27 PM Task #8675 (Closed): Authorization service to test: auth-d.dev.d4science.org
Lucio Lelii
11:27 AM Task #8696 (Rejected): Upgrade ubuntu version on dataminer[1-2]-d-d4s.d4science.org
In order to align all the dataminer instances and to install correctly the package GDAL 2.1, it's needed to upgrade t... Roberto Cirillo
11:17 AM Task #8679 (Closed): New Python Packages Installation on DataMiners
The user confirmed that math and random are two specific functions inside the "scipy" package. This means that everyt... Paolo Scarponi

May 18, 2017

06:51 PM Task #8692: Provide root access to workspace-repository-prod and workspace-repository-prod1
~~~
nb-assante:~ massi$ ssh root@workspace-repository-prod.d4science.org
Permission denied (publickey).
nb-assante...
Massimiliano Assante
06:49 PM Task #8692 (Closed): Provide root access to workspace-repository-prod and workspace-repository-prod1
The fact the none of Costantino, Valentina and me has root access to these machines is slowing us down.
Please do.
Massimiliano Assante
06:43 PM Task #8443 (Closed): Home Library Webapp to test : node11.d.d4science.research-infrastructures.eu
HomeLibrary webapp is working. Valentina Marioli
06:15 PM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
the migration process is now working with no exception but we have some issues in starting up the repo after the migr... Massimiliano Assante
05:45 PM Task #8427 (Closed): Quota service to test : quota-d-d4s.d4science.org
Alessandro Pieve
05:38 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
due to changes in a related task Roberto Cirillo
05:36 PM Task #8689 (Rejected): [VREModeler] Remove edisonVO from node44.p.d4science.research-infrastructures.eu
In order to dismiss the Edison VO it's needed to remove it from the VREModeler service hosted on :
~~~
node44.p.d...
Roberto Cirillo
05:34 PM Task #8679: New Python Packages Installation on DataMiners
I just noted that the download locations provided by the user who required the installation of such packages do not a... Paolo Scarponi
05:22 PM Task #8679: New Python Packages Installation on DataMiners
Do you know the exact packages name? scipy and numpy are already installed on all dataminers, but there are no packag... Andrea Dell'Amico
12:52 PM Task #8679 (Closed): New Python Packages Installation on DataMiners
The following Python packages should be installed on all the Data Miners in order to enable the integration of a new ... Paolo Scarponi
05:32 PM Task #8688 (Rejected): Move registry-edison.d4science.org to registry-parthenosvo.d4science.org
In order to convert Edison VO to another VO called ParthenosVO, it's needed to perform the following steps:
* sto...
Roberto Cirillo
05:30 PM Task #8687 (Rejected): Move collector-edison.d4science.org to collector-parthenosvo.d4science.org
In order to convert Edison VO to another VO called ParthenosVO, it's needed to perform the following steps:
* sto...
Roberto Cirillo
03:34 PM Task #8445: FHNManager Service to test : node2-d-d4s.d4science.org
FHN Service works fine in Java8 also. Nunzio Andrea Galante
02:09 PM Task #8675 (In Progress): Authorization service to test: auth-d.dev.d4science.org
Lucio Lelii
10:01 AM Task #8675 (Closed): Authorization service to test: auth-d.dev.d4science.org
Roberto Cirillo
12:55 PM Task #7630 (Closed): Share Updates , missing character as double < and > in production
Massimiliano Assante
12:27 PM Task #8430 (Closed): gcube-oauth service to test : socialnetworking-d-d4s.d4science.org
the application is ok Costantino Perciante
12:06 PM Task #8430: gcube-oauth service to test : socialnetworking-d-d4s.d4science.org
Same problem of #8431 Roberto Cirillo
10:57 AM Task #8430 (In Progress): gcube-oauth service to test : socialnetworking-d-d4s.d4science.org
Costantino Perciante
12:15 PM Task #8429 (Closed): social-networking-ws service to test : socialnetworking-d-d4s.d4science.org
It works Costantino Perciante
12:11 PM Task #8431 (Closed): resource-checker-se-plugin service to test : resource-checker-d-d4s.d4science.org
Yes, after restarting the container there is no longer such a problem
The plugin is running correctly
Costantino Perciante
12:03 PM Task #8431: resource-checker-se-plugin service to test : resource-checker-d-d4s.d4science.org
it is a DNS problem. Please @tommaso.piccioli@isti.cnr.it could you check this node? Roberto Cirillo
10:51 AM Task #8431 (In Progress): resource-checker-se-plugin service to test : resource-checker-d-d4s.d4science.org
Costantino Perciante
12:03 PM Task #6309 (Planned): D4Science Infrastructure migration to Java 8
Massimiliano Assante
11:50 AM Task #8428 (Closed): Accounting service to test: accounting-service-d.d4science.org
Service works. Alessandro Pieve
10:26 AM Task #8435 (Closed): tabular-data-manager service to update : gcube@node7.d.d4science.research-infrastructures.eu
this service has been moved on tabulardata-devnext-d.dev.d4science.org and the ticket related to this activity is the... Roberto Cirillo
10:21 AM Task #8442: Authorization Service to update : auth@node7.d.d4science.research-infrastructures.eu
For performing the java8 tests I've created two new tickets for both services hosted on node7.p:
#8660
#8675
I...
Roberto Cirillo

May 17, 2017

07:20 PM Task #8674: Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
@tommaso.piccioli@isti.cnr.it if there is no geoserver configuration to force it using https internally, it's possibl... Andrea Dell'Amico
07:14 PM Task #8674 (Closed): Tuna Atlas GeoServer - OpenLayers preview doesn't work under https
Hello,while testing WMS layers for the Tuna Atlas, we realized that the **OpenLayers layer preview** (usually used to... Emmanuel Blondel
07:05 PM Task #8673 (Closed): Reconfigure the authorization clients in dev to use https://auth-d.dev.d4science.org/ as the URL for the authentication service
So that the traffic goes over https and we can get rid of the old hostname node7.d.d4science.research-infrastructures... Andrea Dell'Amico
06:53 PM VM Creation #8561: Move authorization service instance on a new VM called auth-dev.d4science.org
I just moved the hostname node7.d.d4science.research-infrastructures.eu as alias of auth-d.dev.d4science.org Andrea Dell'Amico
06:52 PM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
I shut down the tabulardata service on the old VM Andrea Dell'Amico
10:34 AM VM Creation #8563 (Closed): Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
Roberto Cirillo
06:47 PM Task #8564: Move tabulardata databases hosted on node7.d to postgresql-srv-dev
For the time being, because the hostname node7.d.d4science.research-infrastructures.eu needs to be moved as alias of ... Andrea Dell'Amico
06:43 PM Support #8498 (Closed): Adding SSH keys to RPrototypingLab VRE
OK, I guess we will need a new call to fix the production environment details.
Andrea Dell'Amico
06:36 PM Support #8498: Adding SSH keys to RPrototypingLab VRE
Yes, the service will be released according to such requirements. Nunzio Andrea Galante
06:09 PM Support #8498: Adding SSH keys to RPrototypingLab VRE
Nunzio Andrea Galante wrote:
> Andrea, please ignore the previous request, we have solved in a different way.
> Btw...
Roberto Cirillo
06:42 PM VM Creation #8472 (Closed): New VM dataminer needed
Andrea Dell'Amico
06:32 PM Task #8645: Please provide Access to gCube SVN to CLS
@massimiliano.assante@isti.cnr.it we talked about two new VREs, some days ago: gcube-developers and dnet-developers (... Andrea Dell'Amico
06:01 PM Task #8645: Please provide Access to gCube SVN to CLS
It is not automatic and should not be automatic. gCube VRE contains too many people which should not be authorised to... Massimiliano Assante
05:43 PM Task #8645: Please provide Access to gCube SVN to CLS
I am confused. Access should be given to user belonging to the gCube VRE. Are they members of that VRE? Pasquale Pagano
04:33 PM Task #8645 (Feedback): Please provide Access to gCube SVN to CLS
Done. They just need to complete their registration on manage.research-infrastructures.eu.
Andrea Dell'Amico
04:31 PM Task #8645 (In Progress): Please provide Access to gCube SVN to CLS
Andrea Dell'Amico
06:18 PM Task #8443 (In Progress): Home Library Webapp to test : node11.d.d4science.research-infrastructures.eu
Valentina Marioli
04:38 PM Task #8443: Home Library Webapp to test : node11.d.d4science.research-infrastructures.eu
The tomcat is running with Java8. I'm going to assign this ticket to @valentina.marioli@isti.cnr.it for testing the H... Roberto Cirillo
06:00 PM VM Creation #8486 (Closed): Provide a new SmartGears node for resource-checker plugin
it works! It has been scheduled every 2 hours Costantino Perciante
11:18 AM VM Creation #8486 (Feedback): Provide a new SmartGears node for resource-checker plugin
@costantino.perciante@isti.cnr.it could you check if the service works properly now, please? Roberto Cirillo
11:15 AM VM Creation #8486 (In Progress): Provide a new SmartGears node for resource-checker plugin
Roberto Cirillo
05:44 PM Task #8446: DataManager Pool Manager Service to test : node2-d-d4s.d4science.org
Dataminer-pool-manageris running now with Java8 Roberto Cirillo
05:42 PM Task #8445 (In Progress): FHNManager Service to test : node2-d-d4s.d4science.org
Fhn-manager service is running now with Java8 Roberto Cirillo
05:06 PM Task #8444 (Closed): sdi-service to test : sdi-d-d4s.d4science.org
Service works flawlessly. Fabio Sinibaldi
04:06 PM Task #8566: "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
The production copy of yesterday did not work out as only the folder containing the DERBY DB was copied. Today @tomma... Massimiliano Assante
03:51 PM Support #8596: Install Knime on DataMiner machines
1 - currently I'm using the full version, but the base version is faster. Perhaps in the future our users will want t... Gianpaolo Coro
03:45 PM Support #8596: Install Knime on DataMiner machines
A couple of questions:
1. did you need the basic o full version?
2. do we will need to install it on the other dat...
Andrea Dell'Amico
03:40 PM Support #8596 (Closed): Install Knime on DataMiner machines
It works well, thanks! Gianpaolo Coro
02:46 PM Task #8296 (Closed): OpenIt VRE and Redmine Project removal
OpenIT has been removed from the infra correctly Massimiliano Assante
10:48 AM Task #8527 (Closed): Edit ServiceEndpoint (VREManagement-SmartExecutorPersistenceConfiguration) for smartexecutor in production environment
Luca Frosini
10:48 AM Task #8527: Edit ServiceEndpoint (VREManagement-SmartExecutorPersistenceConfiguration) for smartexecutor in production environment
The Resource has been updated and tested Luca Frosini
10:47 AM Task #8527 (In Progress): Edit ServiceEndpoint (VREManagement-SmartExecutorPersistenceConfiguration) for smartexecutor in production environment
Luca Frosini
10:47 AM Task #8526 (In Progress): Upgrade smart-executor service in production environment
accounting-aggregator.d4science.org has been upgraded. Roberto Cirillo
10:35 AM Task #8660 (Closed): tabular-data-manager service to test : tabulardata-devnext-d.dev.d4science.org
Roberto Cirillo
10:30 AM Task #7456 (Closed): Create new Vm for hosting VREModeler service in D4Research VO
Roberto Cirillo

May 16, 2017

07:09 PM Task #8296: OpenIt VRE and Redmine Project removal
The OpenIt VRE undeploy has been triggered, the Site on the Gateway removed. Going to check later of it has been remo... Massimiliano Assante
06:57 PM Task #8296: OpenIt VRE and Redmine Project removal
Redmine associated project deleted Massimiliano Assante
06:56 PM Task #8296 (In Progress): OpenIt VRE and Redmine Project removal
Massimiliano Assante
07:05 PM Task #8654 (Rejected): Remove VRE Folder D4Research-OpenIt from JCR Repo and storage
Since the D4Research-OpenIt has been undeployed the related VRE Folder should be deleted as well Massimiliano Assante
07:04 PM Support #8297 (Closed): PGFA-UFMT VRE Removal
The PGFA-UFMT VRE has been disposed, the Site on the Gateway removed Massimiliano Assante
06:53 PM Support #8297 (In Progress): PGFA-UFMT VRE Removal
Massimiliano Assante
06:35 PM Task #8564: Move tabulardata databases hosted on node7.d to postgresql-srv-dev
@tommaso.piccioli@isti.cnr.it it seems that the old tabulardata database is more than 100GB in size. We need to sligh... Andrea Dell'Amico
12:06 PM Task #8564 (In Progress): Move tabulardata databases hosted on node7.d to postgresql-srv-dev
Lucio already changed the service endpoints.
@lucio.lelii@isti.cnr.it an import of the old databases is needed?
Andrea Dell'Amico
05:51 PM Upgrade #8650 (Completed): D4Science Gateways upgrade to gCube 4.5
* **DONE**: A new Column family for supporting comment hashtags should be added in the Keyspace
* The -Djava.protoc...
Massimiliano Assante
05:49 PM Upgrade #8648 (Completed): D4Science Infrastructure Upgrade to gCube 4.5
gCube 4.5.0 Upgrade plan of D4Science Infrastructure Massimiliano Assante
05:34 PM Task #8645 (Closed): Please provide Access to gCube SVN to CLS
The following users should have access to gCube SVN, they both have a D4Science account already.
Nicolas Longépé
...
Massimiliano Assante
04:18 PM Support #8498: Adding SSH keys to RPrototypingLab VRE
Andrea, please ignore the previous request, we have solved in a different way.
Btw, it would be useful to have:
n...
Nunzio Andrea Galante
04:00 PM Support #8498: Adding SSH keys to RPrototypingLab VRE
Andrea, we have a last request:
from gcube@node2-d-d4s.d4science.org to gcube@dataminer[0:1]-proto.d4science.org
...
Nunzio Andrea Galante
11:39 AM Support #8498: Adding SSH keys to RPrototypingLab VRE
Done.
Andrea Dell'Amico
04:17 PM Support #8596: Install Knime on DataMiner machines
I changed the script so that it runs without leaving the directory from where it's called.
Andrea Dell'Amico
01:30 PM Support #8596: Install Knime on DataMiner machines
I can confirm that it works on linux too.
On dataminer1-devnext.d4science.org I created the script `/usr/local/bin...
Andrea Dell'Amico
01:14 PM Support #8596 (In Progress): Install Knime on DataMiner machines
After some struggling, I have found a way to execute the workflow via command line. On the Windows OS it is
"C:\P...
Gianpaolo Coro
12:50 PM Support #8596 (Feedback): Install Knime on DataMiner machines
I downloaded and tried to run it on dataminer1-devnext.d4science.org but it always requires a graphical display. It c... Andrea Dell'Amico
03:28 PM VM Creation #8561 (Feedback): Move authorization service instance on a new VM called auth-dev.d4science.org
The service is up. The database configuration is the same as we have on the running dev authorization service.
The...
Andrea Dell'Amico
01:33 PM VM Creation #8561: Move authorization service instance on a new VM called auth-dev.d4science.org
auth-d.dev.d4science.org 146.48.123.127
Andrea Dell'Amico
01:00 PM VM Creation #8561 (In Progress): Move authorization service instance on a new VM called auth-dev.d4science.org
Andrea Dell'Amico
03:02 PM Task #8622 (Closed): Install a newer version of pgpool2 to fix the shutdown problem when the network goes away
It is working. Lucio Lelii
02:29 PM Task #8622 (Feedback): Install a newer version of pgpool2 to fix the shutdown problem when the network goes away
pgpool2 3.6.2 is running on both the dev instances (note: different versions cannot be run together). No configuratio... Andrea Dell'Amico
02:12 PM Task #8622 (In Progress): Install a newer version of pgpool2 to fix the shutdown problem when the network goes away
Andrea Dell'Amico
02:11 PM Task #8622 (Closed): Install a newer version of pgpool2 to fix the shutdown problem when the network goes away

See #8617, we don't want that a network failure causes a shutdown of the pgpool server
Andrea Dell'Amico
02:08 PM Incident #8617 (Closed): both pgpool2 instances stopped themselves
The service was manually restarted.
The behaviour we have experienced seems to be a bug of our running version tha...
Andrea Dell'Amico
02:03 PM Incident #8617 (Closed): both pgpool2 instances stopped themselves
After a local network failure, both the pgpool2 instances failed because they thought they were disconnected from the... Andrea Dell'Amico
12:18 PM Task #8613 (Feedback): Porting data-d.d4science.org and its applications to JAVA 8
Done. tomcat is running against java 8.
Andrea Dell'Amico
12:12 PM Task #8613 (In Progress): Porting data-d.d4science.org and its applications to JAVA 8
Andrea Dell'Amico
12:03 PM Task #8613 (Closed): Porting data-d.d4science.org and its applications to JAVA 8
data-d.d4science.org should be upgraded to JAVA 8 in order to deploy the web applications on it compiled with JDK 8 Francesco Mangiacrapa
12:04 PM VM Creation #8563 (Feedback): Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
The VM is up and running. Available on both http and https.
Andrea Dell'Amico
11:44 AM VM Creation #8563 (In Progress): Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
Andrea Dell'Amico
11:20 AM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
The instance will use the database already defined on `postgresql-srv-dev.d4science.org`
Andrea Dell'Amico
10:37 AM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
I have changed the ServiceEndpoint pointing to this new db. Lucio Lelii
11:05 AM Task #8433 (Closed): social-data-indexer-se-plugin service to test : node22.d4science.org
Maria Di Girolamo
10:55 AM Task #8433 (Feedback): social-data-indexer-se-plugin service to test : node22.d4science.org
It is working ok with java8 Costantino Perciante
09:34 AM Task #8433: social-data-indexer-se-plugin service to test : node22.d4science.org
The service is update. Please, @costantino.perciante@isti.cnr.it could you test it?
Maria Di Girolamo
10:24 AM Task #8292 (Closed): Activate the backup of sharelatex-storage.d4science.org
At the moment mongodump and file system backup are indipendent processes.
mongodump scheduled at 20:00, the backup s...
Tommaso Piccioli
12:40 AM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
ParthenosVO is ok. Pasquale Pagano

May 15, 2017

06:55 PM Task #8363: We need a new dataminer distribution to build the EGI image
A note for @nunzioandrea.galante@eng.it: the contextualization script need to manage a new variable: `AUTHORIZE_CHILD... Andrea Dell'Amico
06:45 PM Task #8363: We need a new dataminer distribution to build the EGI image
DataMiner 1.6 and GenericWorker 1.8 have been updated and published in d4science.org egi VO. Fabio Sinibaldi
06:48 PM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
Andrea Dell'Amico wrote:
> @roberto.cirillo@isti.cnr.it can you provide the missing information?
>
> I've just se...
Roberto Cirillo
06:40 PM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
Andrea Dell'Amico wrote:
> I've just seen that on postgresql-srv-dev.d4science.org two databases named tabulardata...
Andrea Dell'Amico
06:36 PM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
@roberto.cirillo@isti.cnr.it can you provide the missing information?
I've just seen that on postgresql-srv-dev.d4...
Andrea Dell'Amico
06:28 PM VM Creation #8563: Move tabulardata service instance on a new VM called tabulardata-devnext.d4science.org
tabulardata-devnext-d.dev.d4science.org. 146.48.123.126 Andrea Dell'Amico
05:47 PM Support #8498: Adding SSH keys to RPrototypingLab VRE
Andrea, could you please add also:
gcube@node2-d-d4s.d4science.org to gcube@dataminer[1:2]-d-d4s.d4science.org
...
Nunzio Andrea Galante
04:34 PM Task #8591: Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Maybe "ParthenosVO" sounds better to me.
@pasquale.pagano@isti.cnr.it could you set the due date, please?
Roberto Cirillo
04:00 PM Task #8591 (Closed): Create Virtual Organisation for the PARTHENOS Project: ParthenosVO
Differently from previously stated The EDISON Virtual Organisation nodes cannot be reassigned to a new VO for the PAR... Massimiliano Assante
04:26 PM Support #8596 (Closed): Install Knime on DataMiner machines
I need a feasibility check for installing the Knime engine on the Dataminer prototype machines. The engine is downloa... Gianpaolo Coro
04:26 PM Task #8433 (In Progress): social-data-indexer-se-plugin service to test : node22.d4science.org
upgrade to Java8 done Roberto Cirillo
01:57 PM Support #8489: Issues memory (R Studio )
dear Pasquale,
Sorry for the delay of the feedback!
i executed the main script today and it works well Now!
Thank...
TAHA IMZILEN
09:52 AM Support #8489 (Closed): Issues memory (R Studio )
I am going to close this issue since we did not get feedback. Pasquale Pagano
12:48 PM Task #7577 (Closed): A new dataminer distribution is needed
We used the zip file to build the egi image. Andrea Dell'Amico
11:38 AM Incident #8411: mongodb production, problem with backup
During the week-end mongo backup with the rsync method was OK (full and iocremental)
Restored the rsync method bcaus...
Tommaso Piccioli
09:53 AM Incident #8411 (Closed): mongodb production, problem with backup
Pasquale Pagano
11:06 AM Task #8566 (In Progress): "Rehearsal" of Production Jackrabbit Migration from Derby to PostgreSQL
Massimiliano Assante
 

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