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Task #10274

closed

The IRDTunaAtlas R package does not build anymore

Added by Andrea Dell'Amico over 7 years ago. Updated over 7 years ago.

Status:
Closed
Priority:
Normal
Category:
System Application
Target version:
Start date:
Nov 08, 2017
Due date:
% Done:

100%

Estimated time:
Infrastructure:
Development, Pre-Production, Production

Description

Since a long time, apparently. The error log:

'/usr/lib/R/bin/R' --no-site-file --no-environ --no-save --no-restore --quiet  \
  CMD INSTALL  \
  '/tmp/Rtmp69KNAV/devtools5ef571481e41/juldebar-IRDTunaAtlas-1e4e2ca'  \
  --library='/usr/local/lib/R/site-library' --install-tests

ERROR: dependency ‘ncdf’ is not available for package ‘IndicatorsForFisheries’
* removing ‘/usr/local/lib/R/site-library/IndicatorsForFisheries’
Installation failed: Command failed (1)

The ncdf package is not available anymore, indeed. I guess that ncdf4 substitutes it?

Actions #1

Updated by Andrea Dell'Amico over 7 years ago

Its compilation sometimes get stuck too, so the process must be killed manually. If it isn't needed anymore, can we remove it from the install list? If not, can be fixed?

Actions #2

Updated by Gianpaolo Coro over 7 years ago

  • Assignee changed from Gianpaolo Coro to Julien Barde

Hi Julien @julien.barde@ird.fr, the GitHub package "juldebar/IRDTunaAtlas" was requested to be installed on our machines, but we get the error reported in the description of this ticket when installing it. Could you fix it, please? Otherwise, we have to delete it from the list of pre-installed packages.

Actions #3

Updated by Andrea Dell'Amico over 7 years ago

  • Status changed from New to Closed
  • Assignee changed from Julien Barde to Andrea Dell'Amico
  • % Done changed from 0 to 100

I'm removing it from the list. When a working version will be available, we will reinstate it.

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