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From May 08, 2018 to Jun 06, 2018

Jun 06, 2018

07:49 PM D4Science Infrastructure Upgrade #11882 (Completed): Infra Gateways Patch for fixing Incident #11878
The patch has been deployed and tested successfully Massimiliano Assante
07:38 PM D4Science Infrastructure Upgrade #11882 (In Progress): Infra Gateways Patch for fixing Incident #11878
Massimiliano Assante
07:16 PM D4Science Infrastructure Upgrade #11882 (Completed): Infra Gateways Patch for fixing Incident #11878
org.gcube.portlets-user.socialprofile.2-1-1 has been created to fix Incident #11878 (Import profile from LinkedIn error) Massimiliano Assante
06:56 PM D4Science Infrastructure Incident #11878 (Resolved): Import profile from LinkedIn error
After digging the issue I found out that the picture URL returned from LinkedIn People API is now encoded, (e.g. it h... Massimiliano Assante
03:42 PM D4Science Infrastructure Incident #11878: Import profile from LinkedIn error
The issue is due to the fact that the method retrieving the user avatar image returns the following:
~~~
<?xml ve...
Massimiliano Assante
03:31 PM D4Science Infrastructure Incident #11878 (Closed): Import profile from LinkedIn error
When tried to import my profile i got:
Import Error: Something went wrong while parsing your professional summary ...
Massimiliano Assante
06:49 PM D4Science Infrastructure Task #11880 (Closed): Workspace in dev doesn't delete correctly the files stored on MongoDB when a delete from trash is performed
From dev workspace: https://next.d4science.org/group/next/workspace
The files deleted from trash are not deleted f...
Roberto Cirillo
06:35 PM D4Science Infrastructure VM Creation #11509 (Closed): Create a VM for hosting VocBench
The VM has a basic setup.
Andrea Dell'Amico

Jun 05, 2018

06:40 PM D4Science Infrastructure VM Creation #11509 (In Progress): Create a VM for hosting VocBench
The hostname is going to be vocbench1.d4science.org, IP address 90.147.166.120. Andrea Dell'Amico
06:02 PM D4Science Infrastructure Task #11872: Dismissal of EGIP Gateway (Not EGIP VRE)
Done. Andrea Dell'Amico
05:59 PM D4Science Infrastructure Task #11872 (Closed): Dismissal of EGIP Gateway (Not EGIP VRE)
@andrea.dellamico@isti.cnr.it the DNS entry can be removed. Massimiliano Assante
05:51 PM D4Science Infrastructure Task #11872 (In Progress): Dismissal of EGIP Gateway (Not EGIP VRE)
Massimiliano Assante
11:08 AM D4Science Infrastructure Upgrade #11834: D4Science Root VO upgrade to gCube 4.11.1
From new IS point of view we can create a new resource registry instance (please note that it can use the same orient... Luca Frosini
10:50 AM D4Science Infrastructure Upgrade #11834: D4Science Root VO upgrade to gCube 4.11.1
I've found the problem. There is a blocking ticket still open. Roberto Cirillo
10:48 AM D4Science Infrastructure Upgrade #11834: D4Science Root VO upgrade to gCube 4.11.1
I'm not able to set this ticket to complete. I don't know why. @luca.frosini@isti.cnr.it any hint? Roberto Cirillo
10:56 AM D4Science Infrastructure Task #6307 (Closed): Migrate preproduction infrastructure nodes to Java 8
Sorry for the delay. The preproduction environment has been migrated to Java8 successfully. I'm going to close this t... Roberto Cirillo
10:45 AM D4Science Infrastructure Upgrade #11812 (Completed): D4Science Infrastructure Upgrade to gCube 4.11.1
Roberto Cirillo
10:09 AM D4Science Infrastructure Incident #11874 (Closed): geoserver-tunaatlas.d4science.org still runs a smartgears with the accounting bug
distribution upgraded. Roberto Cirillo
10:07 AM D4Science Infrastructure Incident #11874 (In Progress): geoserver-tunaatlas.d4science.org still runs a smartgears with the accounting bug
Roberto Cirillo
10:06 AM D4Science Infrastructure Incident #11874 (Closed): geoserver-tunaatlas.d4science.org still runs a smartgears with the accounting bug
The smartgears distribution should be upgraded Roberto Cirillo

Jun 04, 2018

07:47 PM D4Science Infrastructure Task #11872: Dismissal of EGIP Gateway (Not EGIP VRE)
At the next renewal, the load balancer certificate will not have the egip.d4science.org alias. Let us know when the D... Andrea Dell'Amico
02:43 PM D4Science Infrastructure Task #11872 (Closed): Dismissal of EGIP Gateway (Not EGIP VRE)
The dedicated Gateway of EGIP (https://egip.d4science.org) is going to be dismissed within this week. As agreed with ... Massimiliano Assante
07:07 PM D4Science Infrastructure Task #11873 (Closed): Fix the networking bug introduced by cloud-init on Ubuntu 16.04 oVirt guests
I've run it against every oVirt guest. Now the reboot/poweroff/poweron operations should be safe. I tried the operati... Andrea Dell'Amico
07:02 PM D4Science Infrastructure Task #11873: Fix the networking bug introduced by cloud-init on Ubuntu 16.04 oVirt guests
I just added - and run - a role that removes the cloud-init package (default) or tells cloud-init not to mess with th... Andrea Dell'Amico
06:58 PM D4Science Infrastructure Task #11873 (In Progress): Fix the networking bug introduced by cloud-init on Ubuntu 16.04 oVirt guests
Andrea Dell'Amico
06:30 PM D4Science Infrastructure Task #11873: Fix the networking bug introduced by cloud-init on Ubuntu 16.04 oVirt guests
I just made a test on one of the guests. Removing cloud-init - after the VM first initialisation - has no collateral ... Andrea Dell'Amico
06:28 PM D4Science Infrastructure Task #11873 (Closed): Fix the networking bug introduced by cloud-init on Ubuntu 16.04 oVirt guests
The networks is always reset to dhcp, and the server URL from where it gets the host information is wrong. Andrea Dell'Amico
05:48 PM D4Science Infrastructure Incident #11871 (Closed): PAIM- geoserver: the id of geoserver running instance is the same for all the geoserver instances of PAIM VRE
The problem was due to the persistent folder defined in geoserver/WEB-INF/gcube-app.xml:
~~~
<application mode="o...
Roberto Cirillo
12:36 PM D4Science Infrastructure Incident #11871 (Closed): PAIM- geoserver: the id of geoserver running instance is the same for all the geoserver instances of PAIM VRE
All the Geoserver instances of PAIM, have the same resource id:
~~~
geoserver-protectedareaimpactmaps.d4science....
Roberto Cirillo
03:36 PM D4Science Infrastructure Task #11547: ISTI OpenPortal Backup
Concerning the Open Science Portal, we already have a domain name registered: www.open-science.it
Emma Lazzeri
03:29 PM D4Science Infrastructure Task #11547: ISTI OpenPortal Backup
Consider that the entire installation should be moved from the development infrastructure to ISTI servers.
Conside...
Michele Artini
03:30 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
I forgot to also change the ACL used by the old home library. Your request were intercepted by that rule and redirect... Andrea Dell'Amico
03:00 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
It isn't working, I tried the following URL
~~~
http://workspace-repository.d4science.org/storagehub/gcube/resour...
Lucio Lelii
11:40 AM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Done. Now the load balancer is happy. Andrea Dell'Amico
11:08 AM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
the check to understand if the node is up is {hostname}/storagehub/gcube/resource/ Lucio Lelii

Jun 01, 2018

08:21 PM D4Science Infrastructure Incident #11870 (Closed): Two huge problems on the oVirt cluster

I managed to fix the gluster file system explicitly starting again the volumes. After that, the VMs did not start c...
Andrea Dell'Amico
08:12 PM D4Science Infrastructure Incident #11870 (Closed): Two huge problems on the oVirt cluster

Yesterday, a node upgrade + restart crashed the gluster file system. It happened because even if the restarted node...
Andrea Dell'Amico
06:43 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
The VM has been provisioned. A working check for the load balancer is needed, because /storagehub returns an error ev... Andrea Dell'Amico
05:35 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
The load balancer has been configured. The main URL is workspace-repository.d4science.org ( /storagehub,/homelibrary-... Andrea Dell'Amico
05:30 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Wrong variable, now it should be fixed. Andrea Dell'Amico
05:25 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
The following task is failing:
~~~
TASK [../../library/roles/data_disk : Create a file system on the new disks] *...
Roberto Cirillo
05:13 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Thank you @andrea.dellamico@isti.cnr.it I'm going to run the playbook right now Roberto Cirillo
05:06 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
The VM is up. I've added the two volumes, they will be mounted by the playbook.
I also cleaned up the playbook and...
Andrea Dell'Amico
03:51 PM D4Science Infrastructure VM Creation #11852 (In Progress): Create a VM to deploy the new storage hub application.
I'm going to name it storagehub1.d4science.org. Andrea Dell'Amico
10:59 AM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
@andrea.dellamico@isti.cnr.it @tommaso.piccioli@isti.cnr.it could you update the status of this activity please? Thanks! Massimiliano Assante
11:58 AM D4Science Infrastructure Task #11861 (Closed): EDISON Portal instance IP auth to be removed on Production Infrastructure
Massimiliano Assante
11:57 AM D4Science Infrastructure Task #11859 (Closed): Disable D4Science Cassandra cluster to be contacted by EDISON Portal instance
Massimiliano Assante
11:56 AM D4Science Infrastructure Task #11860 (Closed): Disable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance
Massimiliano Assante
10:22 AM D4Science Infrastructure VM Creation #11509: Create a VM for hosting VocBench
I just commented on #11504 ... according to the meeting we had few days ago Agroknow colleagues are preparing details... Leonardo Candela

May 31, 2018

04:54 PM D4Science Infrastructure VM Creation #11509: Create a VM for hosting VocBench
Any news on this? Should I proceed to create an empty VM or do we wait for instructions?
Andrea Dell'Amico
04:36 PM D4Science Infrastructure Task #11844 (Closed): geoserver?.d4science.org: Provide a script for start/stop the tomcat container
Done. Now you can use the start/stop scripts that are present into the `gcube` home directory.
Andrea Dell'Amico
04:35 PM D4Science Infrastructure Task #11844 (In Progress): geoserver?.d4science.org: Provide a script for start/stop the tomcat container
Andrea Dell'Amico
03:39 PM D4Science Infrastructure Task #10240 (Closed): Install a modern virtualisation framework to host the 'corporate' services
Andrea Dell'Amico
03:38 PM D4Science Infrastructure Task #11858 (Closed): please deny authorization for EDISON Portal production instance on ldap-liferay.d4science.org
Done. Andrea Dell'Amico
11:00 AM D4Science Infrastructure Task #11858 (Closed): please deny authorization for EDISON Portal production instance on ldap-liferay.d4science.org
the EDISON Portal production instance has an IP address 194.149.136.227
Massimiliano Assante
03:26 PM D4Science Infrastructure Task #11859 (Feedback): Disable D4Science Cassandra cluster to be contacted by EDISON Portal instance
Done. Andrea Dell'Amico
03:21 PM D4Science Infrastructure Task #11859 (In Progress): Disable D4Science Cassandra cluster to be contacted by EDISON Portal instance
Andrea Dell'Amico
11:02 AM D4Science Infrastructure Task #11859 (Closed): Disable D4Science Cassandra cluster to be contacted by EDISON Portal instance
The production portal instance has an IP address 194.149.136.227 (datasciencepro.eu) Massimiliano Assante
03:19 PM D4Science Infrastructure Task #11860 (Feedback): Disable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance
Done.
Andrea Dell'Amico
03:10 PM D4Science Infrastructure Task #11860 (In Progress): Disable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance
Andrea Dell'Amico
11:04 AM D4Science Infrastructure Task #11860 (Closed): Disable D4Science ElasticSearch cluster to be contacted by EDISON Portal instance
The production instance has an IP address 194.149.136.227 (datasciencepro.eu) Massimiliano Assante
03:08 PM D4Science Infrastructure Task #11861 (Feedback): EDISON Portal instance IP auth to be removed on Production Infrastructure
Done. I added to the playbook the IP address of @luca.frosini@isti.cnr.it's PC. Andrea Dell'Amico
02:59 PM D4Science Infrastructure Task #11861 (In Progress): EDISON Portal instance IP auth to be removed on Production Infrastructure
Andrea Dell'Amico
11:08 AM D4Science Infrastructure Task #11861 (Closed): EDISON Portal instance IP auth to be removed on Production Infrastructure
We currently have an exception in the auth service for EDISON Portal instance IP that can generate tokens. Please rem... Massimiliano Assante
02:18 PM D4Science Infrastructure Task #11709 (Closed): Post configuration of the oVirt manager
Done, I also added a logrotate entry to prune the engine backup files. Andrea Dell'Amico
11:42 AM D4Science Infrastructure Task #11864 (Closed): Remove gCube portlets and VO Site from EDISON Portal
The powered by D4Science logo was removed as well Massimiliano Assante
11:41 AM D4Science Infrastructure Task #11864 (Closed): Remove gCube portlets and VO Site from EDISON Portal
Massimiliano Assante
11:18 AM D4Science Infrastructure Task #11862 (Closed): Dismiss EDISON Virtual Organisation and related enabling services
Let me remind that the VMs dedicated to EDISON have to be reassigned to preproduction root VO. Massimiliano Assante
10:58 AM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
it would be beneficial if the VM would be up by end of today? The sooner the better Massimiliano Assante

May 30, 2018

01:17 PM D4Science Infrastructure Support #11560: Remove old CDH 5.9 Cluster
@michele.debonis@isti.cnr.it @sandro.labruzzo@isti.cnr.it any news on that? Andrea Dell'Amico
01:16 PM D4Science Infrastructure VM Creation #11729: VM for mongo
I've fixed the openstack firewall rules. Can you check?
Andrea Dell'Amico

May 29, 2018

06:49 PM D4Science Infrastructure Task #11737: Please setup a Nextcloud instance on D4Science
I just created the host nextcloud-test.d4science.net. It will be visible as soon as the authoritative DNS servers wi... Andrea Dell'Amico
06:40 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support
A good candidate: https://github.com/Neilpang/acme.sh
It also has support for the powerdns APIs.
Andrea Dell'Amico
06:24 PM D4Science Infrastructure Task #11825 (In Progress): Setup New gateway performfish.d4science.net
I just added the hostname. The certificate will have to wait. Andrea Dell'Amico
05:34 PM D4Science Infrastructure Upgrade #11814 (Completed): D4Science Gateways upgrade to gCube 4.11.1
Massimiliano Assante
05:07 PM D4Science Infrastructure Upgrade #11814 (In Progress): D4Science Gateways upgrade to gCube 4.11.1
Massimiliano Assante
05:06 PM D4Science Infrastructure Upgrade #11814 (Planned): D4Science Gateways upgrade to gCube 4.11.1
Massimiliano Assante
05:06 PM D4Science Infrastructure Upgrade #11813 (Completed): D4Science Preprod Gateway upgrade to gCube 4.11.1
Massimiliano Assante
04:47 PM D4Science Infrastructure Upgrade #11834 (In Progress): D4Science Root VO upgrade to gCube 4.11.1
Roberto Cirillo
03:26 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
I would keep the `workspace-repository.d4science.org` hostname on the balancer to overcome the certificates problem. ... Andrea Dell'Amico
03:20 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
I would also like to say that for the moment, the storagehub is in ready-only mode on JR repository. Roberto Cirillo
02:53 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Lucio Lelii wrote:
> Massimiliano Assante wrote:
> > @lucio.lelii@isti.cnr.it are we sure that This new VM shouldn'...
Massimiliano Assante
02:52 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Massimiliano Assante wrote:
> @lucio.lelii@isti.cnr.it are we sure that This new VM shouldn't be in the same cluster...
Lucio Lelii
02:50 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
I don't think we should rename the VM, let's keep it workspace-repository-prod.d4science.org
@lucio.lelii@isti.cn...
Massimiliano Assante
02:37 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
I think it's better if we talk about it. Andrea Dell'Amico
12:55 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
This new VM shouldn't be in the same cluster with the workspace-repository-prod1.d4science.org VM but it should share... Roberto Cirillo
12:33 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Also keep in mind that we will need a new load balancer configuration.
Will the new storage hub able to work in a cl...
Andrea Dell'Amico
12:31 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Not a dedicated one, but the matter was discussed in #10264 that I just added as related.
Please open a new ticket...
Andrea Dell'Amico
12:19 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
Andrea Dell'Amico wrote:
> That VM was destroyed because it was unused. If there are plans to finally activate the c...
Roberto Cirillo
12:02 PM D4Science Infrastructure VM Creation #11852: Create a VM to deploy the new storage hub application.
That VM was destroyed because it was unused. If there are plans to finally activate the cluster, the VM must be reins... Andrea Dell'Amico
11:54 AM D4Science Infrastructure VM Creation #11852 (Closed): Create a VM to deploy the new storage hub application.
I need to install the storagehub webapp on this VM but it seems to be not reachable:
~~~
rcirillo@rcirillo-cnr:~$...
Roberto Cirillo
02:25 PM D4Science Infrastructure Support #11823 (Closed): Interaction R - workspace : function to retrieve Link
Feature #11853 has been created to support the request Massimiliano Assante
01:01 PM D4Science Infrastructure Support #11823: Interaction R - workspace : function to retrieve Link
I would actually be interested to have this function to use it on my workflow. By July it is fine for me.
Thanks
Paul Taconet
12:48 PM D4Science Infrastructure Support #11823: Interaction R - workspace : function to retrieve Link
Paul, If the timing is ok with you we can schedule the activity. Please let me know. Massimiliano Assante
12:44 PM D4Science Infrastructure Support #11823 (Feedback): Interaction R - workspace : function to retrieve Link
Hello Paul,
there is not GetLink REST API. We could add it in the next release meaning will be available in July. Pl...
Massimiliano Assante
10:41 AM D4Science Infrastructure Task #11844: geoserver?.d4science.org: Provide a script for start/stop the tomcat container
There's a role already that adds a custom start/stop script inside the gcube home directory and configures the sudo r... Andrea Dell'Amico

May 25, 2018

11:38 AM StocksAndFisheriesKB Support #11842: Unexpected errors when publishing GRSF fishery records
Thank you too and sorry for the issue Luca Frosini
11:21 AM StocksAndFisheriesKB Support #11842 (Closed): Unexpected errors when publishing GRSF fishery records
I confirm that the publishing of GRSF fisheries have started without issues
Thanks again
Yannis Marketakis
10:58 AM StocksAndFisheriesKB Support #11842: Unexpected errors when publishing GRSF fishery records
Thank you
I'm starting over now
Yannis Marketakis
10:50 AM StocksAndFisheriesKB Support #11842 (Feedback): Unexpected errors when publishing GRSF fishery records
Thank you @roberto.cirillo@isti.cnr.it
@marketak@ics.forth.gr can you restart the process?
Luca Frosini
10:48 AM StocksAndFisheriesKB Support #11842: Unexpected errors when publishing GRSF fishery records
Luca Frosini wrote:
> @roberto.cirillo@isti.cnr.it I fixed such an issue. Can you please redeploy GRSF web service i...
Roberto Cirillo
10:42 AM StocksAndFisheriesKB Support #11842: Unexpected errors when publishing GRSF fishery records
@roberto.cirillo@isti.cnr.it I fixed such an issue. Can you please redeploy GRSF web service in production? Luca Frosini
10:38 AM StocksAndFisheriesKB Support #11842 (In Progress): Unexpected errors when publishing GRSF fishery records
It seems related to a typo (a had 'fishing uni' without the t) and this causes the issue.
I'm going to fix it and re...
Luca Frosini
08:44 AM StocksAndFisheriesKB Support #11842 (Closed): Unexpected errors when publishing GRSF fishery records
Legacy and GRSF stock records have been published smoothly.
However when we try to publish GRSF fishery records mo...
Yannis Marketakis
11:33 AM StocksAndFisheriesKB Task #11786 (Closed): GRSF-services-core updates
Perfect Thanks Yannis Marketakis
10:26 AM D4Science Infrastructure Task #11844 (Closed): geoserver?.d4science.org: Provide a script for start/stop the tomcat container
Is it possible to have a standard script for start/stop the tomcat container in the gcube home?
I've tried to use th...
Roberto Cirillo
10:16 AM D4Science Infrastructure Incident #11843 (Closed): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
I've restarted the tomcat using the following command by root:
~~~
service tomcat-instance-8180 restart
~~~
...
Roberto Cirillo
10:08 AM D4Science Infrastructure Incident #11843 (In Progress): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
Roberto Cirillo
10:07 AM D4Science Infrastructure Incident #11843 (Closed): geoserver.d4science.org: java.lang.OutOfMemoryError: Java heap space
Roberto Cirillo

May 24, 2018

09:32 AM D4Science Infrastructure Support #11823: Interaction R - workspace : function to retrieve Link
Hi,
Any information on this ticket? The objective for me is to provide some links to the data through the catalogue,...
Paul Taconet

May 23, 2018

06:58 PM D4Science Infrastructure Task #11828 (Closed): Add reference country shapefile to production RDB
Thank you very much for your prompt reply! It works Emmanuel Blondel
05:37 PM D4Science Infrastructure Task #11828 (In Progress): Add reference country shapefile to production RDB
I added the shape file both on production and pre-production databases (table countries).
Please verify that is wo...
Kostas Kakaletris
05:13 PM StocksAndFisheriesKB Task #11826: Purge all data from GRSF_Admin Catalogue
Thanks Francesco.
Publishing has just started
Yannis Marketakis
05:05 PM StocksAndFisheriesKB Task #11826: Purge all data from GRSF_Admin Catalogue
With many thanks, Nikos Yannis please let us know when publish is over Aureliano Gentile
04:25 PM StocksAndFisheriesKB Task #11826 (Closed): Purge all data from GRSF_Admin Catalogue
@marketak@ics.forth.gr @aureliano.gentile@fao.org all data have been deleted (see at: https://bluebridge.d4science.or... Francesco Mangiacrapa
11:54 AM StocksAndFisheriesKB Task #11826: Purge all data from GRSF_Admin Catalogue
yes, please ensure not legacy / left over / dependencies remain in the catalogue. So we can republish the GRSF KB com... Aureliano Gentile
11:41 AM StocksAndFisheriesKB Task #11826: Purge all data from GRSF_Admin Catalogue
Thank you Francesco,
Yes please purge them as well.
Yannis Marketakis
11:31 AM StocksAndFisheriesKB Task #11826: Purge all data from GRSF_Admin Catalogue
All the GRSF items have been deleted (see at: https://bluebridge.d4science.org/group/grsf_admin/data-catalogue)
@a...
Francesco Mangiacrapa
04:58 PM D4Science Infrastructure Support #11772: Please provide access to pc-frosini.isti.cnr.it to prod authorization service
Andrea Dell'Amico wrote:
> I guess it was a manual change to the configuration?
Yes
Lucio Lelii
04:29 PM D4Science Infrastructure Support #11772: Please provide access to pc-frosini.isti.cnr.it to prod authorization service
@lucio.lelii@isti.cnr.it please answer Luca Frosini
12:27 PM D4Science Infrastructure Support #11772: Please provide access to pc-frosini.isti.cnr.it to prod authorization service
I guess it was a manual change to the configuration?
Andrea Dell'Amico
04:01 PM StocksAndFisheriesKB Feature #11832 (Closed): Add sub-groups support for available time series related to GRSF Type "Assessment Unit" in web service
Luca Frosini
02:37 PM StocksAndFisheriesKB Feature #11832: Add sub-groups support for available time series related to GRSF Type "Assessment Unit" in web service
Fixed Luca Frosini
02:13 PM StocksAndFisheriesKB Feature #11832: Add sub-groups support for available time series related to GRSF Type "Assessment Unit" in web service
it seems that "Scientific advice" has not been added. Please see note 1 of this ticket https://support.d4science.org/... Aureliano Gentile
02:09 PM StocksAndFisheriesKB Feature #11832 (In Progress): Add sub-groups support for available time series related to GRSF Type "Assessment Unit" in web service
by default the group name is prepended with the source. In such a case this has to be avoided. Luca Frosini
02:07 PM StocksAndFisheriesKB Feature #11832 (Closed): Add sub-groups support for available time series related to GRSF Type "Assessment Unit" in web service
The sub-groups for stock status time series are:
Abundance Level
Abundance Level (FIRMS Standard)
Ca...
Luca Frosini
03:35 PM D4Science Infrastructure Upgrade #11812 (In Progress): D4Science Infrastructure Upgrade to gCube 4.11.1
Roberto Cirillo
03:34 PM D4Science Infrastructure Upgrade #11812 (Planned): D4Science Infrastructure Upgrade to gCube 4.11.1
Roberto Cirillo
03:33 PM D4Science Infrastructure Upgrade #11834 (Planned): D4Science Root VO upgrade to gCube 4.11.1
**Smartgears services**
* **(CNR) DONE** dataminer.garr.d4science.org: upgrade ecological-engine library on every ...
Roberto Cirillo
03:30 PM D4Science Infrastructure Upgrade #11834 (Completed): D4Science Root VO upgrade to gCube 4.11.1
Roberto Cirillo
03:28 PM D4Science Infrastructure Upgrade #11833 (Completed): /gcube/preprod upgrade to gCube 4.11.1
Roberto Cirillo
03:27 PM D4Science Infrastructure Upgrade #11833 (In Progress): /gcube/preprod upgrade to gCube 4.11.1
Roberto Cirillo
03:27 PM D4Science Infrastructure Upgrade #11833 (Planned): /gcube/preprod upgrade to gCube 4.11.1

**Smartgears services**
* **(CNR) DONE** dataminer1-pre.d4science.org: upgrade ecological-engine library
* **...
Roberto Cirillo
03:25 PM D4Science Infrastructure Upgrade #11833 (Completed): /gcube/preprod upgrade to gCube 4.11.1
Roberto Cirillo
02:26 PM D4Science Infrastructure Support #11827 (Closed): Geoserver logs unavailable
Thanks for the details Paul Taconet
02:23 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
Thanks @roberto.cirillo@isti.cnr.it all logs are accessible now. We can close the ticket Emmanuel Blondel
02:23 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
The gcube-logs are substitute of what you have within the geoserver. you will not have the latter. To get geoserver l... Emmanuel Blondel
02:20 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
I confirm I can access the gcube logs.
However, the geoserver logs of both the french tuna atlas and the SDI lab Ge...
Paul Taconet
12:42 PM D4Science Infrastructure Support #11827 (Feedback): Geoserver logs unavailable
The logs are available now in http(s) mode at the following urls:
~~~
https://geoserver-french-tunaatlas.d4scien...
Roberto Cirillo
12:25 PM D4Science Infrastructure Support #11827 (In Progress): Geoserver logs unavailable
Roberto Cirillo
12:16 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
Better then expected! Fabio Sinibaldi
12:13 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
ssh access is not required, we can expose the log files via http(s).
@roberto.cirillo@isti.cnr.it you can set to `T...
Andrea Dell'Amico
12:08 PM D4Science Infrastructure Support #11827: Geoserver logs unavailable
Access to logs should be configured at system level, defining ssh access to the log folder. System engineers know the... Fabio Sinibaldi
11:12 AM D4Science Infrastructure Support #11827: Geoserver logs unavailable
Yes, I have created this new ticket because #11045 is closed. Paul Taconet
10:51 AM D4Science Infrastructure Support #11827: Geoserver logs unavailable
is this request the same as in #11045? Pasquale Pagano
01:28 PM D4Science Infrastructure Task #11737: Please setup a Nextcloud instance on D4Science
I just created an empty VM to host the service. The hostname is ip-90-147-167-177.ct1.garrservices.it. @tommaso.picci... Andrea Dell'Amico
12:19 PM D4Science Infrastructure Task #11831: Explore new letsencrypt clients to add wildcard certificates support
Unfortunately our client of choice https://github.com/hlandau/acme does not support the ACME v2 APIs yet, so we have ... Andrea Dell'Amico
12:17 PM D4Science Infrastructure Task #11831 (Closed): Explore new letsencrypt clients to add wildcard certificates support
wildcard certificates would be very useful on the load balancers: they overcome the certificates number limit, and we... Andrea Dell'Amico
12:07 PM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net
Unfortunately not, it does not work that way.
I was sure that I already opened a ticket to explore the wildcards o...
Andrea Dell'Amico
11:59 AM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net
can you take the place of edison.d4science.org? we don't need that anymore. And no, performfish.d4science.net is not ... Massimiliano Assante
11:55 AM D4Science Infrastructure Task #11825: Setup New gateway performfish.d4science.net
We have huge problems to add certificates in the d4science.org domain where other certificates are already present. I... Andrea Dell'Amico
11:14 AM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
Yannis Marketakis wrote:
> @francesco.mangiacrapa@isti.cnr.it and @luca.frosini@isti.cnr.it I assume that I'll be...
Francesco Mangiacrapa
11:08 AM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
Thanks @massimiliano.assante@isti.cnr.it ,I have just checked, the catalogue is now the French tuna atlas one.
Thank...
Paul Taconet
11:04 AM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
I think I did now, please @paul.taconet@ird.fr can you check? https://bluebridge.d4science.org/group/frenchtropicaltu... Massimiliano Assante
10:53 AM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
please @massimiliano.assante@isti.cnr.it configure the VRE to access the right GN instance. Pasquale Pagano
08:32 AM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
Any news then? Paul Taconet
10:53 AM D4Science Infrastructure VM Creation #11045: FrenchTropicalTunaAtlas dedicated GeoServer
@pasquale.pagano@isti.cnr.it fyi I've asked Paul to create a separate ticket for the same request, as this ticket was... Emmanuel Blondel
10:49 AM D4Science Infrastructure VM Creation #11045: FrenchTropicalTunaAtlas dedicated GeoServer
please Fabio look at this issue. Pasquale Pagano
10:46 AM D4Science Infrastructure Incident #11829 (Closed): geonetwork-french-tunaatlas.d4science.org still runs a smartgears with the accounting bug
Roberto Cirillo
10:38 AM D4Science Infrastructure Incident #11829 (In Progress): geonetwork-french-tunaatlas.d4science.org still runs a smartgears with the accounting bug
Roberto Cirillo
10:37 AM D4Science Infrastructure Incident #11829 (Closed): geonetwork-french-tunaatlas.d4science.org still runs a smartgears with the accounting bug
It must be upgraded to the latest release. Roberto Cirillo

May 22, 2018

11:24 PM D4Science Infrastructure Task #11828 (Closed): Add reference country shapefile to production RDB
Since we don't have admin rights to the RDB production (wecafc) database, we are not able to upload a new reference s... Emmanuel Blondel
09:11 PM D4Science Infrastructure Support #11827 (Closed): Geoserver logs unavailable
Hi,
I cannot access the Geoserver logs nor of the French tuna atlas GS (http://geoserver-french-tunaatlas.d4science....
Paul Taconet
06:15 PM StocksAndFisheriesKB Task #11826 (Closed): Purge all data from GRSF_Admin Catalogue
All data saved on the GRSF_Admin catalogue https://bluebridge.d4science.org/group/grsf_admin/data-catalogue must be p... Francesco Mangiacrapa
05:51 PM D4Science Infrastructure Task #11825 (Closed): Setup New gateway performfish.d4science.net
We need to setup a new gateway on liferay cluster and that would respond to https://performfish.d4science.org
Plea...
Massimiliano Assante
10:50 AM D4Science Infrastructure Task #11821: Ansible: Provide a new role for storageHub webapp
Now dev works, I got you while restarting it I suppose, please make it work the preprod scopes as well (preVRE, Dorne) Massimiliano Assante
10:48 AM D4Science Infrastructure Task #11821 (In Progress): Ansible: Provide a new role for storageHub webapp
Wonderful nothing works now in dev https://next.d4science.org/group/next/storage-hub
nor in preprod https://pre.d4...
Massimiliano Assante
10:47 AM D4Science Infrastructure Task #11821 (Closed): Ansible: Provide a new role for storageHub webapp
It works Lucio Lelii
10:13 AM D4Science Infrastructure Task #11821 (Feedback): Ansible: Provide a new role for storageHub webapp
PLease @lucio.lelii@isti.cnr.it could you close this ticket if the storagehub works well? Roberto Cirillo
10:12 AM D4Science Infrastructure Task #11821 (In Progress): Ansible: Provide a new role for storageHub webapp
The playbook has been run successfully on dev instance. Roberto Cirillo
10:07 AM D4Science Infrastructure Task #11821 (Closed): Ansible: Provide a new role for storageHub webapp
The new role should be tested on
~~~
workspace-repository-devnext.d4science.org
~~~
running on developmnent...
Roberto Cirillo
10:11 AM D4Science Infrastructure Support #11823 (Closed): Interaction R - workspace : function to retrieve Link
I need to retrieve through R the URL of some files that are stored in the WS.
The function "getPublicFileLinkWS" (ht...
Paul Taconet
09:59 AM D4Science Infrastructure VM Creation #11045: FrenchTropicalTunaAtlas dedicated GeoServer
Hi,
I cannot access the Geoserver logs (see attached image and file). I need to access them to understand why some o...
Paul Taconet
09:58 AM D4Science Infrastructure Upgrade #11813 (In Progress): D4Science Preprod Gateway upgrade to gCube 4.11.1
Massimiliano Assante
08:12 AM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
Thank you all for your answers.
The only pending issue, therefore, is the identification of the catalogue prefix.
W...
Yannis Marketakis

May 21, 2018

06:29 PM D4Science Infrastructure Upgrade #11814 (Completed): D4Science Gateways upgrade to gCube 4.11.1
Massimiliano Assante
06:28 PM D4Science Infrastructure Upgrade #11813 (Planned): D4Science Preprod Gateway upgrade to gCube 4.11.1
Massimiliano Assante
06:27 PM D4Science Infrastructure Upgrade #11813 (Completed): D4Science Preprod Gateway upgrade to gCube 4.11.1
Massimiliano Assante
06:26 PM D4Science Infrastructure Upgrade #11812 (Completed): D4Science Infrastructure Upgrade to gCube 4.11.1
Massimiliano Assante
06:01 PM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
the above example of SOURCE RECORD CITATION is fine with me. Aureliano Gentile
05:32 PM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
Hi @marketak@ics.forth.gr
it is ok from my side. I already added the support for 'citation' field in the code.
...
Luca Frosini
02:33 PM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
Hi Yannis,
I can reply to..
Yannis Marketakis wrote:
> * We tried to improve the readability of species and ...
Francesco Mangiacrapa
12:49 PM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
The aforementioned updates have been carried out. There are still the following pending issues, which I would like to... Yannis Marketakis
10:56 AM StocksAndFisheriesKB Task #11786: GRSF-services-core updates
* create a new field called connections_indicator that will contain the values connected / not connected --> **DONE**... Yannis Marketakis
12:39 PM StocksAndFisheriesKB Feature #11806: Add sub-groups for available time series related to GRSF Type "assessment unit"
I checked the sub-groups, also through the "Group Hierarchy" view and looks fine, but at the moment they are all empt... Aureliano Gentile
12:20 PM StocksAndFisheriesKB Feature #11806 (Feedback): Add sub-groups for available time series related to GRSF Type "assessment unit"
@aureliano.gentile@fao.org I just added the new sub-groups of assessment unit as listed above: https://support.d4scie... Francesco Mangiacrapa
12:07 PM StocksAndFisheriesKB Feature #11806 (In Progress): Add sub-groups for available time series related to GRSF Type "assessment unit"
Francesco Mangiacrapa
09:30 AM D4Science Infrastructure Task #11733 (Closed): Dismiss the ganeti cluster: dlib5x, dlib7xx, dlib11x
hardware switched off Tommaso Piccioli

May 18, 2018

05:17 PM D4Science Infrastructure Support #11772: Please provide access to pc-frosini.isti.cnr.it to prod authorization service
Thanks Luca Frosini
05:16 PM D4Science Infrastructure Support #11772 (Closed): Please provide access to pc-frosini.isti.cnr.it to prod authorization service
Lucio Lelii
04:35 PM D4Science Infrastructure Incident #11800 (Closed): BlueBRIDGE catalogue is not responding well
The issue is related to the fact that the gCubeApps VO Is Collector is overloaded and takes time to respond. please f... Massimiliano Assante
04:20 PM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Francesco Mangiacrapa wrote:
> Massimiliano Assante wrote:
> > The exception you reported (SEVERE: Servlet.service(...
Massimiliano Assante
04:13 PM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Massimiliano Assante wrote:
> The exception you reported (SEVERE: Servlet.service() for servlet jsp threw exception ...
Francesco Mangiacrapa
03:37 PM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
The exception you reported (SEVERE: Servlet.service() for servlet jsp threw exception java.lang.IllegalStateException... Massimiliano Assante
03:02 PM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
@roberto.cirillo@isti.cnr.it
About your comments reported at https://support.d4science.org/issues/11800#note-6
...
Francesco Mangiacrapa
11:49 AM D4Science Infrastructure Incident #11800 (Feedback): BlueBRIDGE catalogue is not responding well
why do you think this is a problem related to IS-Collector service? Roberto Cirillo
11:48 AM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Francesco Mangiacrapa wrote:
> Roberto Cirillo wrote:
> > Please @francesco.mangiacrapa@isti.cnr.it could you provi...
Roberto Cirillo
11:23 AM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Roberto Cirillo wrote:
> Please @francesco.mangiacrapa@isti.cnr.it could you provide the logs that you are checking?...
Francesco Mangiacrapa
11:03 AM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Please @francesco.mangiacrapa@isti.cnr.it could you provide the logs that you are checking?
@massimiliano.assante@i...
Roberto Cirillo
10:57 AM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
9.41 AM this morning, yesterday 17.30 circa Massimiliano Assante
10:52 AM D4Science Infrastructure Incident #11800: BlueBRIDGE catalogue is not responding well
Another clarification... contacting the BB Catalogue directly by the CKAN URL (https://ckan-bb1.d4science.org/) it re... Francesco Mangiacrapa
10:45 AM D4Science Infrastructure Incident #11800 (In Progress): BlueBRIDGE catalogue is not responding well
Checking the logs it seems that the issue is connected to IS-queries. In fact, when in init phase the responses to IS... Francesco Mangiacrapa
09:49 AM D4Science Infrastructure Incident #11800 (Closed): BlueBRIDGE catalogue is not responding well
Since yesterday I noticed that the BB Catalogue has some issues when loading, the behaviour is not deterministic. Aft... Massimiliano Assante
04:20 PM D4Science Infrastructure Task #11801: Create PerformFish project group in Redmine
Yes. Gianpaolo Coro
04:02 PM D4Science Infrastructure Task #11801: Create PerformFish project group in Redmine
@gianpaolo.coro@isti.cnr.it can you please confirm? Luca Frosini
04:02 PM D4Science Infrastructure Task #11801: Create PerformFish project group in Redmine
I was related to that no one sprint was present. Creating one sprint (i.e. VRE) solved the issue. Luca Frosini
02:39 PM D4Science Infrastructure Task #11801: Create PerformFish project group in Redmine
When I create a Task ticket it gives the error "Sprint can't be blank" Gianpaolo Coro
02:33 PM D4Science Infrastructure Task #11801 (Closed): Create PerformFish project group in Redmine
The project is available with the requested features here
https://support.d4science.org/projects/performfish
Luca Frosini
02:27 PM D4Science Infrastructure Task #11801 (In Progress): Create PerformFish project group in Redmine
Luca Frosini
10:27 AM D4Science Infrastructure Task #11801 (Closed): Create PerformFish project group in Redmine
Tickets should be assigned to the PerformFish project (corresponding to the PerformFish VRE). Could you please create... Gianpaolo Coro
04:15 PM StocksAndFisheriesKB Feature #11806: Add sub-groups for available time series related to GRSF Type "assessment unit"
All these are sub-groups of assessment unit https://bluebridge.d4science.org/group/grsf_admin/data-catalogue?path=gro... Aureliano Gentile
04:00 PM StocksAndFisheriesKB Feature #11806: Add sub-groups for available time series related to GRSF Type "assessment unit"
Where should these sub-groups be created?
Under:
1. the group "GRSF Assessment Unit" reachable at https://blue...
Francesco Mangiacrapa
03:12 PM StocksAndFisheriesKB Feature #11806: Add sub-groups for available time series related to GRSF Type "assessment unit"
Forgot scientific advice:
> The sub-groups for stock status time series are:
>
> * Abundance Level (FIRMS Stand...
Aureliano Gentile
12:42 PM StocksAndFisheriesKB Feature #11806 (Closed): Add sub-groups for available time series related to GRSF Type "assessment unit"
The sub-groups for stock status time series are:
* Abundance Level (FIRMS Standard)
* Abundance Level
* Fishing ...
Aureliano Gentile

May 17, 2018

04:37 PM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
I set The VM creation blocked by the ticket tracking refactoring the smart-executor plugin #11756. You don't need to ... Luca Frosini
10:41 AM D4Science Infrastructure VM Creation #11771: Please create a VM having access to prod authorization service
this VM is not required until the ticket #11770 is not closed. See such tickets for more details Luca Frosini
04:36 PM D4Science Infrastructure VM Creation #11770 (Rejected): Please create a VM having access to dev authorization service
I talk with @pasquale.pagano@isti.cnr.it and we don't need an instance in dev. I'm going to close this ticket. Only p... Luca Frosini
10:40 AM D4Science Infrastructure VM Creation #11770: Please create a VM having access to dev authorization service
I set The VM creation blocked by the ticket tracking refactoring the smart-executor plugin. You don't need to create ... Luca Frosini
10:42 AM StocksAndFisheriesKB Task #11786 (In Progress): GRSF-services-core updates
Yannis Marketakis
10:42 AM StocksAndFisheriesKB Task #11786 (Closed): GRSF-services-core updates
The following updates are required in the grsf-services-core component:
* apply the new types for Stocks: (Assessm...
Yannis Marketakis

May 16, 2018

10:49 PM D4Science Infrastructure Support #11763 (Closed): Unable to update algorithms on DataMiner
I built it from scratch and I managed publish it without any errors :).
Thanks,
Daniel
Daniel Williams
03:13 PM StocksAndFisheriesKB Feature #11766 (Closed): Add a tag (or group) for GRSF connected / not connected records
Luca Frosini
03:06 PM StocksAndFisheriesKB Feature #11766: Add a tag (or group) for GRSF connected / not connected records
@marketak@ics.forth.gr is sounds good for me. Thanks a lot. Luca Frosini
07:53 AM StocksAndFisheriesKB Feature #11766: Add a tag (or group) for GRSF connected / not connected records
Of course.
Shall we use the field name **connections_indicator** with the values "connected" and "not connected" ?
Yannis Marketakis
02:39 PM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
I confirm what @fabio.sinibaldi@isti.cnr.it said. Roberto Cirillo
12:42 PM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
IS seems to be correctly configured as you can see at http://sdi.d4science.org/sdi-service/gcube/service/SDI?gcube-to... Fabio Sinibaldi
12:32 PM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
@roberto.cirillo@isti.cnr.it please the configuration of the resources in the IS and assign the right GN if needed.
...
Pasquale Pagano
12:23 PM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
Paul Taconet wrote:
> The Geonetwork catalogue on the French Tropical Tuna Atlas VRE is the FAO Tuna atlas one (i.e....
Andrea Dell'Amico
12:19 PM D4Science Infrastructure VM Creation #11038: FrenchTropicalTunaAtlas dedicated GeoNetwork
The Geonetwork catalogue on the French Tropical Tuna Atlas VRE is the FAO Tuna atlas one (i.e. when I click on "Data ... Paul Taconet

May 15, 2018

06:12 PM D4Science Infrastructure VM Creation #11492 (Closed): Please create new VM for hosting Natural Language Processing (NLP) web applications: nlp.d4science.org
The certificate has been emitted on April 12th.
Andrea Dell'Amico
05:06 PM StocksAndFisheriesKB Feature #11766 (In Progress): Add a tag (or group) for GRSF connected / not connected records
@marketak@ics.forth.gr can we manage such a requirements as done for 'With Similarities' - 'No Similarities' (see #11... Luca Frosini
03:04 PM StocksAndFisheriesKB Feature #11766: Add a tag (or group) for GRSF connected / not connected records
Aureliano Gentile wrote:
> since it would be the same logic as "with/without similarities" tags, maybe it is better ...
Francesco Mangiacrapa
12:42 PM StocksAndFisheriesKB Feature #11766: Add a tag (or group) for GRSF connected / not connected records
since it would be the same logic as "with/without similarities" tags, maybe it is better to have "connected/not conne... Aureliano Gentile
11:29 AM StocksAndFisheriesKB Feature #11766: Add a tag (or group) for GRSF connected / not connected records
Have two additional tags "connected / "not connected" is feasible through the (GRSF) publishing service by reading th... Francesco Mangiacrapa
05:06 PM StocksAndFisheriesKB Feature #11749: Add 'With Similarities' - 'No Similarities' tag to GRSF Records
@marketak@ics.forth.gr added the support on KB providing an additional field named 'similarities_indicator' containin... Luca Frosini
04:59 PM StocksAndFisheriesKB Feature #11767 (Closed): Add group for SDG flag
Luca Frosini
12:51 PM StocksAndFisheriesKB Feature #11767: Add group for SDG flag
Aureliano Gentile wrote:
> Thanks, but please note is "SDG" not sdf.
Sure! It was my wrong typing in the previous...
Francesco Mangiacrapa
12:39 PM StocksAndFisheriesKB Feature #11767: Add group for SDG flag
Thanks, but please note is "SDG" not sdf. Aureliano Gentile
11:16 AM StocksAndFisheriesKB Feature #11767: Add group for SDG flag
I just created the group "SDF Flag" available at https://bluebridge.d4science.org/group/grsf_admin/data-catalogue?pat... Francesco Mangiacrapa
11:49 AM D4Science Infrastructure Task #11709 (In Progress): Post configuration of the oVirt manager
Andrea Dell'Amico

May 14, 2018

06:02 PM StocksAndFisheriesKB Feature #11773: CKAN enhancements: show a spinner image facility during the page loading
Thanks a lot, I see it in Firefox, not in Chrome. But it might be my persistent browser cache. Anyway thanks a lot! Aureliano Gentile
05:46 PM StocksAndFisheriesKB Feature #11773 (Closed): CKAN enhancements: show a spinner image facility during the page loading
This facility has been released in production. It is available for all CKANs.
Unfortunately, at the moment **it does...
Francesco Mangiacrapa
03:45 PM StocksAndFisheriesKB Feature #11773 (Closed): CKAN enhancements: show a spinner image facility during the page loading
Natively the CKAN template does not show a loading facility (i.e. a spinner as popoup) during the page loading.
It ...
Francesco Mangiacrapa
05:38 PM D4Science Infrastructure Support #11772: Please provide access to pc-frosini.isti.cnr.it to prod authorization service
@lucio.lelii@isti.cnr.it You had doubts. Can you elaborate?
Andrea Dell'Amico
03:11 PM D4Science Infrastructure Support #11772 (Closed): Please provide access to pc-frosini.isti.cnr.it to prod authorization service
This is needed until I have refactored the smart-executor plugin to support data harvesting.
Luca Frosini
03:18 PM D4Science Infrastructure Task #11769 (Closed): Please provide access to pc-frosini.isti.cnr.it to dev authorization service
The dev authorization service is open to everyone. Lucio Lelii
02:59 PM D4Science Infrastructure Task #11769 (Closed): Please provide access to pc-frosini.isti.cnr.it to dev authorization service
This is needed to develop data harvester smart-executor plugin capable to be scheduled Luca Frosini
03:05 PM D4Science Infrastructure VM Creation #11771 (Closed): Please create a VM having access to prod authorization service
Luca Frosini
03:03 PM D4Science Infrastructure VM Creation #11770 (Rejected): Please create a VM having access to dev authorization service
Luca Frosini
03:01 PM D4Science Infrastructure Support #11763 (Feedback): Unable to update algorithms on DataMiner
I solved the problems with the Workspace.
Please @daniel.williams@southwales.ac.uk , can you try to republish your ...
Giancarlo Panichi
10:29 AM D4Science Infrastructure Support #11763 (In Progress): Unable to update algorithms on DataMiner
Hi @daniel.williams@southwales.ac.uk, It would seem like a Workspace issue, I try to investigate it. Giancarlo Panichi
01:39 PM D4Science Infrastructure Task #11762 (Closed): The LDAP server, when in producer (master) mode, never removes the log files used to handle the replica changes
Fixed a bug that prevented the script to find that the service was not running. Now it's reliable. Andrea Dell'Amico
11:52 AM StocksAndFisheriesKB Feature #11767 (Closed): Add group for SDG flag
Similarly to "GRSF Traceability Flag" we need a group for "SDG Flag" Aureliano Gentile
11:49 AM StocksAndFisheriesKB Feature #11766 (Closed): Add a tag (or group) for GRSF connected / not connected records
Equivalently to the tag "With similarities" / "without similarities", to support the validation procedures it would b... Aureliano Gentile

May 13, 2018

11:16 PM D4Science Infrastructure Support #11763: Unable to update algorithms on DataMiner
please @g.panichi@isti.cnr.it look at this issue. Pasquale Pagano
10:35 PM D4Science Infrastructure Support #11763 (Closed): Unable to update algorithms on DataMiner
I am trying to update two "Pre-installed" type projects using the SAI however I am receiving an exception each time I... Daniel Williams
05:37 PM D4Science Infrastructure Task #11762 (Feedback): The LDAP server, when in producer (master) mode, never removes the log files used to handle the replica changes
I split the two cases.
* I added a cron job that runs at 5am every day. It tries a restart of the `slapd` service....
Andrea Dell'Amico
05:33 PM D4Science Infrastructure Task #11762 (In Progress): The LDAP server, when in producer (master) mode, never removes the log files used to handle the replica changes
Andrea Dell'Amico
05:32 PM D4Science Infrastructure Task #11762 (Closed): The LDAP server, when in producer (master) mode, never removes the log files used to handle the replica changes
ldap uses a specialised set of log files, under `/var/lib/ldap/accesslog`, so that the consumers are able to get the ... Andrea Dell'Amico

May 11, 2018

02:27 PM StocksAndFisheriesKB Bug #11754: Wrong or missing format for source/data owner metadata in narrative fields (Assessment Methods ; Scientific advice ; State and trend of Marine Resource)
@marketak@ics.forth.gr thanks for your support Luca Frosini
02:26 PM StocksAndFisheriesKB Bug #11754 (In Progress): Wrong or missing format for source/data owner metadata in narrative fields (Assessment Methods ; Scientific advice ; State and trend of Marine Resource)
As reported from @aureliano.gentile@fao.org "in state an trend of marine resource the reporting year is still missing... Luca Frosini
12:38 PM StocksAndFisheriesKB Bug #11754: Wrong or missing format for source/data owner metadata in narrative fields (Assessment Methods ; Scientific advice ; State and trend of Marine Resource)
Hi Luca,
attached you will find the JSON object for the particular record
Yannis Marketakis
11:44 AM StocksAndFisheriesKB Bug #11754 (Closed): Wrong or missing format for source/data owner metadata in narrative fields (Assessment Methods ; Scientific advice ; State and trend of Marine Resource)
In this example ‘Scientific advice” and “State and trend of marine resources” are not consistently referenced as now ... Luca Frosini
02:19 PM StocksAndFisheriesKB Feature #11747 (Closed): CKAN Template enhancement: show full text of TAGs
Aureliano Gentile wrote:
> The display of the tags is now much better, thanks a lot. But to finally clear this point...
Luca Frosini
02:18 PM StocksAndFisheriesKB Task #11464 (Closed): Update stock endpoint for GRSF-Publication-Service
Luca Frosini
08:21 AM StocksAndFisheriesKB Task #11464: Update stock endpoint for GRSF-Publication-Service
Yes I think so Yannis Marketakis
11:21 AM StocksAndFisheriesKB Feature #11752 (Closed): "Archived" is missing among the NEW status values to be selected for GRSF records Admin Panel
Luca Frosini

May 10, 2018

06:26 PM StocksAndFisheriesKB Feature #11747: CKAN Template enhancement: show full text of TAGs
The display of the tags is now much better, thanks a lot. But to finally clear this point, may I know the total amoun... Aureliano Gentile
02:48 PM StocksAndFisheriesKB Feature #11747: CKAN Template enhancement: show full text of TAGs
IHMO they are fine. Do you agree @aureliano.gentile@fao.org ? Luca Frosini
02:44 PM StocksAndFisheriesKB Feature #11747 (Feedback): CKAN Template enhancement: show full text of TAGs
I just updated the template adding the above facility. TAGs and Navigation Items (i.e. the labels/links used for filt... Francesco Mangiacrapa
11:02 AM StocksAndFisheriesKB Feature #11747 (Closed): CKAN Template enhancement: show full text of TAGs
From: https://support.d4science.org/projects/stocksandfisherieskb/wiki/18-05-09-GRSF_release
CKAN Template enhance...
Francesco Mangiacrapa
05:10 PM StocksAndFisheriesKB Task #11464: Update stock endpoint for GRSF-Publication-Service
It seems working. Do you think I can close the ticket? Luca Frosini
05:09 PM StocksAndFisheriesKB Feature #11749 (Closed): Add 'With Similarities' - 'No Similarities' tag to GRSF Records
Luca Frosini
11:34 AM StocksAndFisheriesKB Feature #11749 (Closed): Add 'With Similarities' - 'No Similarities' tag to GRSF Records
The tag will be added using the value of 'similarities_indicator' field as agreed with @marketak@ics.forth.gr Luca Frosini
11:29 AM D4Science Infrastructure Task #11718 (Closed): please enable context "sports-analytics" to exploratories.d4science.org
Massimiliano Assante

May 09, 2018

06:15 PM D4Science Infrastructure VM Creation #11729: VM for mongo
mongodb is running. You have access as `ubuntu`, the mongodb server will be open to our ISTI networks and to the GARR... Andrea Dell'Amico
05:47 PM D4Science Infrastructure VM Creation #11729: VM for mongo
I'm installing mongo 3.6. The firewall rules cannot be setup correctly until the maintenance window of the GARR clust... Andrea Dell'Amico
04:38 PM D4Science Infrastructure Task #11745 (Closed): node14-d-d4s.d4science.org: Increase file descriptor limit to 16000 on registry service instance
Roberto Cirillo
03:35 PM D4Science Infrastructure Task #11745: node14-d-d4s.d4science.org: Increase file descriptor limit to 16000 on registry service instance
No, I didn't notice that the user is gcube2 and not gcube. Now the limit applies to gcube2 too.
Andrea Dell'Amico
02:45 PM D4Science Infrastructure Task #11745 (Feedback): node14-d-d4s.d4science.org: Increase file descriptor limit to 16000 on registry service instance
Andrea Dell'Amico wrote:
> Done. The service must be restarted to inherit the change.
>
> Next time you can apply...
Roberto Cirillo
12:31 PM D4Science Infrastructure Task #11745 (In Progress): node14-d-d4s.d4science.org: Increase file descriptor limit to 16000 on registry service instance
Done. The service must be restarted to inherit the change.
Next time you can apply the change by yourself, running...
Andrea Dell'Amico
11:59 AM D4Science Infrastructure Task #11745 (Closed): node14-d-d4s.d4science.org: Increase file descriptor limit to 16000 on registry service instance
As done in production, it's needed to increase the file descriptor limit to 16000 in order to avoid the TooManyOpenFi... Roberto Cirillo

May 08, 2018

06:15 PM D4Science Infrastructure Task #11737: Please setup a Nextcloud instance on D4Science
Better install it in one of the GARR regions, as B2Drop will be a remote service.
If we then like it or some of it...
Andrea Dell'Amico
05:04 PM D4Science Infrastructure VM Creation #11729: VM for mongo
The hostname is mongo-playground.dnet.d4science.org Andrea Dell'Amico
04:57 PM D4Science Infrastructure VM Creation #11729 (In Progress): VM for mongo
Andrea Dell'Amico
 

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