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Andrea Dell'Amico's activity

From Nov 05, 2017 to Dec 04, 2017

Dec 04, 2017

06:51 PM D4Science Infrastructure Task #10521 (Closed): D4Research: Add cronjob on VREModeler service
Done. Andrea Dell'Amico
06:42 PM D4Science Infrastructure Task #8555 (Closed): Please provide more resource to Redmine
Closing. Open another one if you want to try to disable the two configuration settings listed in https://support.d4sc... Andrea Dell'Amico

Dec 03, 2017

08:08 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
The script is running. But I just realized that the hosts you reported in your first comment but http://ip-90-147-167... Andrea Dell'Amico
07:59 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
No problem doing it. But the haproxy statistics don't lie
Andrea Dell'Amico
07:21 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
I don't know what you did, but the requests are always perfectly balanced between all servers. You can see by yoursel... Andrea Dell'Amico
07:01 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
Are you sure that those instances received any job request after Nov 29th? Because the logs configuration were update... Andrea Dell'Amico
05:42 PM D4Science Infrastructure Task #10479 (Closed): Cloud Provisioning Requests
Andrea Dell'Amico
05:41 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
The new configuration is operational. I removed the `cloud1` cluster configuration from the CNR haproxy instance. Andrea Dell'Amico
02:08 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
The haproxy stats on dataminer-lb.garr.d4science.org:8880 are accessible with the same credentials that are valid for... Andrea Dell'Amico
01:47 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
I just reconfigured the dataminer haproxy and moved the host dataminer-cloud1.d4science.org. It is now a CNAME of dat... Andrea Dell'Amico

Dec 01, 2017

07:51 PM D4Science Infrastructure Task #10479: Cloud Provisioning Requests
I just adopted a configuration on both the CNR haproxy instance and the dataminer.garr loadbalancer that makes all th... Andrea Dell'Amico
06:28 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I think we can close this one. There's space for more optimisations but we should disable some features we rely on. A... Andrea Dell'Amico
01:23 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I added again the global_roles plugin too, btw. Andrea Dell'Amico
01:20 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I also see that we are using both the problematic configurations reported in the ticket:
* Allow issue assignment...
Andrea Dell'Amico
01:16 AM D4Science Infrastructure Task #8555 (Feedback): Please provide more resource to Redmine
Things seem slightly better now. I would not say that's fast now, but better. Andrea Dell'Amico
01:14 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I just applied the fix suggested here: http://www.redmine.org/issues/17700 Andrea Dell'Amico
01:10 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
But I think I've found the culprit: http://www.redmine.org/issues/14906
I think we can live without that.
Andrea Dell'Amico
01:07 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I added again `Redmine Code Review plugin`. While the other one was already installed.
Andrea Dell'Amico
03:17 PM D4Science Infrastructure Task #10487 (Feedback): Give access to UOA machines to contact SimulFishGrowth_prod
Done. Can you check?
Andrea Dell'Amico
03:17 PM D4Science Infrastructure Task #10487 (In Progress): Give access to UOA machines to contact SimulFishGrowth_prod
Andrea Dell'Amico
02:32 PM D4Science Infrastructure Task #10487: Give access to UOA machines to contact SimulFishGrowth_prod
What databases do you need to access? All the SimulFishGrowth ones?
~~~
SimulFishGrowth | sfguser
SimulFi...
Andrea Dell'Amico
02:41 PM D4Science Infrastructure Task #9213: enable calDAV authentication on D4Science Gateways
I don't think so: from the haproxy point of view they are all remote targets, it never points to 'localhost' or somet... Andrea Dell'Amico
12:59 AM D4Science Infrastructure Task #9213: enable calDAV authentication on D4Science Gateways
I also tried to start a http frontend on port 8443 and use it to backend a single tomcat instance. It does not work (... Andrea Dell'Amico
12:51 AM D4Science Infrastructure Task #9213: enable calDAV authentication on D4Science Gateways
I just made another test, to add confusion. On both the pre and production load balancers I activated a frontend that... Andrea Dell'Amico
12:30 AM D4Science Infrastructure Task #9213: enable calDAV authentication on D4Science Gateways
It does not work, really. I can add a calendar only when a single tomcat instance is running, and this explains why i... Andrea Dell'Amico
01:05 PM D4Science Infrastructure Task #10505: R processes out of control on dataminer0-proto.d4science.org
I just killed them to be able to start the dataminer again, but as it's not the first time that it happens it should ... Andrea Dell'Amico
01:04 PM D4Science Infrastructure Task #10505 (Closed): R processes out of control on dataminer0-proto.d4science.org
There are a lot of them, and dataminer cannot start because they are using too much RAM:
~~~
gcube 4623 0.0 ...
Andrea Dell'Amico
12:08 AM D4Science Infrastructure Task #7356 (Feedback): Please check HA Load Balancer on preprod
Andrea Dell'Amico
12:07 AM D4Science Infrastructure Task #7356 (In Progress): Please check HA Load Balancer on preprod
I tried all the possible combinations, alternatively restarting nginx on the two nodes, and the requests are always b... Andrea Dell'Amico
12:05 AM D4Science Infrastructure Task #6232 (In Progress): Enable Infrastructure Gateway cluster communication behind firewall
I'm going to test on preproduction Andrea Dell'Amico

Nov 30, 2017

11:46 PM D4Science Infrastructure Task #6232 (Feedback): Enable Infrastructure Gateway cluster communication behind firewall
Andrea Dell'Amico
11:45 PM D4Science Infrastructure Task #6232 (In Progress): Enable Infrastructure Gateway cluster communication behind firewall
(sorry, the comment was meant to another ticket) Andrea Dell'Amico
06:42 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
Luca Frosini wrote:
> Repository tab in gcube project seems not working properly anymore. The revision and the comme...
Andrea Dell'Amico
06:15 PM D4Science Infrastructure Task #9213: enable calDAV authentication on D4Science Gateways
It's now working on preproduction. It seems that it could depend by some configuration that I just moved from global ... Andrea Dell'Amico
03:12 PM D4Science Infrastructure Task #10495 (Closed): Update nginx configuration on preprod homelibrary webapp: requests with file too big are rejected
Done. The limit is now 50GB as in the production environment. Andrea Dell'Amico
02:52 PM D4Science Infrastructure VM Creation #10482 (Closed): New Joomla Portal
Andrea Dell'Amico

Nov 29, 2017

08:37 PM D4Science Infrastructure Task #9857: Evacuate the hypervisors from dlib14x to dlib19x
Only some dev VMs on dlib18x remains (thanks to Tom, he is doing all the work). Andrea Dell'Amico
07:58 PM D4Science Infrastructure VM Creation #10482 (Feedback): New Joomla Portal
Andrea Dell'Amico
05:24 PM D4Science Infrastructure VM Creation #10482 (In Progress): New Joomla Portal
demo.openportal.d4science.org 146.48.123.161
Andrea Dell'Amico
04:04 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
Removed. It's still very slow, but I'll need some quiet hours to examine the postgresql queries again. Andrea Dell'Amico
12:04 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
OK, I'll do it at the start of the downtime window. Andrea Dell'Amico
03:51 PM D4Science Infrastructure Task #10479 (In Progress): Cloud Provisioning Requests
Gianpaolo Coro wrote:
> 3 - save the DM logs up to 3 months earlier
I'm running the log reconfiguration right now...
Andrea Dell'Amico
12:33 PM D4Science Infrastructure Task #10358 (Closed): Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
We will destroy this one, and a couple of the ones from the ones requested for the FAO course. See #10223 Andrea Dell'Amico
12:31 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
After talking with GP we decided to finally add those VMs to the `cloud1` cluster. We also destroy some of them: two ... Andrea Dell'Amico

Nov 28, 2017

04:35 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
As those VMs were requested to face the FAO course, can we destroy some of them?
Andrea Dell'Amico
04:19 PM D4Science Infrastructure Task #10467 (In Progress): I need a way to communicate with the IS from a script
A link to the REST API was provided: https://dev.d4science.org/swagger/registry/ Andrea Dell'Amico
04:03 PM D4Science Infrastructure Task #10317: Increase the resources of dataminer[1:5]-p-d4s.d4science.org
dataminer1-p-d4s.d4science.org: move from dlib23x.dom0.research-infrastructures.eu to dlib34x.dom0.research-infrastru... Andrea Dell'Amico
03:56 PM D4Science Infrastructure VM Creation #10382 (Closed): Extend Resources to D-Net Index
Andrea Dell'Amico
02:02 PM D4Science Infrastructure Task #10358: Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
I talked with Roberto. The dataminer will be moved into the production pool.
Andrea Dell'Amico
11:50 AM D4Science Infrastructure Task #10358: Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
I read the description, but @gianpaolo.coro@isti.cnr.it told me repeatedly that he's sure it's still needed for TextC... Andrea Dell'Amico
01:28 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
Luca Frosini wrote:
> Instead the following the has to be admin
> Pasquale Pagano
> Luca Frosini
> Andrea Dell'...
Andrea Dell'Amico

Nov 27, 2017

07:40 PM D4Science Infrastructure Task #10358: Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
@roberto.cirillo@isti.cnr.it @g.panichi@isti.cnr.it @gianpaolo.coro@isti.cnr.it can I have an answer please?
Can we ...
Andrea Dell'Amico
07:32 PM D4Science Infrastructure Task #9551: Some jobs wrote big chunks of data into the persistence jackrabbit table
Some days ago, the DB size increased by almost 10GB in 48 hours. It's been stable again since than, but those increme... Andrea Dell'Amico
07:28 PM D4Science Infrastructure Task #10287 (Closed): Schedule downtime for GN DB
The DB was moved to another hypervisor on Nov 22 as scheduled. Now the clients are working correctly. Andrea Dell'Amico
07:24 PM D4Science Infrastructure Task #10467 (Closed): I need a way to communicate with the IS from a script
A REST API would be perfect. Otherwise we will need something specific to pass the haproxy configuration data.
Andrea Dell'Amico
06:43 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I just removed the plugin on the redmine dev instance, https://redmine-d.d4science.org without any apparent loss of f... Andrea Dell'Amico
11:50 AM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I cannot find a related ticket. There was a spreadsheet with a list of potential plugins at some point, but I cannot ... Andrea Dell'Amico

Nov 25, 2017

04:57 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
I just removed the following plugins:
* Advanced roadmap & milestones plugin
* Recurring Tasks (Issues)
* Redmin...
Andrea Dell'Amico
03:40 PM D4Science Infrastructure Task #9857 (In Progress): Evacuate the hypervisors from dlib14x to dlib19x
Some VMs have been migrated. Andrea Dell'Amico
12:25 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
A working version of the command:
~~~
for i in `ls -l /proc/*/fd/* 2>/dev/null | grep delete | grep tomcat | awk ...
Andrea Dell'Amico

Nov 24, 2017

07:14 PM D4Science Infrastructure Task #10358: Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
Can anybody give a final answer?
Andrea Dell'Amico
07:13 PM D4Science Infrastructure Task #10223 (Closed): Provide machines for FAO course
I'm closing the ticket. Open another one when you feel ready to add them to the cloud1 cluster.
Andrea Dell'Amico
05:14 PM D4Science Infrastructure Task #9688 (Closed): handle the applications provisioned using maven_artifact correctly
I'm closing this one. I fixed all the roles but the smart executor plugins ones. They will be modified when the uber ... Andrea Dell'Amico
03:14 PM D4Science Infrastructure Task #10440: Please add a smart-executor instance with accounting-insert-rstudio-se-plugin on each RStudio nodes
We could face a problem here: we replicated the users home directories on almost all the rstudio instances. We should... Andrea Dell'Amico
03:04 PM D4Science Infrastructure Task #10434: Please add accounting-insert-rstudio-se-plugin to quota-plugin.d4science.org smart-executor instance
Yes, fixed the playbook. Andrea Dell'Amico
01:24 PM D4Science Infrastructure Task #10434 (Feedback): Please add accounting-insert-rstudio-se-plugin to quota-plugin.d4science.org smart-executor instance
Done. Can you check?
Andrea Dell'Amico
01:13 PM D4Science Infrastructure Task #10434 (In Progress): Please add accounting-insert-rstudio-se-plugin to quota-plugin.d4science.org smart-executor instance
Andrea Dell'Amico

Nov 23, 2017

07:16 PM D4Science Infrastructure Incident #10433 (Closed): couchbase02.d4science.org crashed
Andrea Dell'Amico
07:14 PM D4Science Infrastructure Incident #10433 (In Progress): couchbase02.d4science.org crashed
Restarting it right now. Andrea Dell'Amico
07:11 PM D4Science Infrastructure Incident #10433 (Closed): couchbase02.d4science.org crashed
The VM crashed. Andrea Dell'Amico
02:51 PM D4Science Infrastructure Task #10426 (Feedback): new database in dev for storageHub service
Done. Andrea Dell'Amico
02:32 PM D4Science Infrastructure Task #10426: new database in dev for storageHub service
workspace db and user:
db: new-ws-repo-dev
user: new-ws-repo-dev-user
workspace cluster journal db and user:
...
Andrea Dell'Amico
02:24 PM D4Science Infrastructure Task #10426 (In Progress): new database in dev for storageHub service
Andrea Dell'Amico
01:09 PM D4Science Infrastructure Task #10427 (Closed): Rebuild the ip-90-147-167-222.ct1.garrservices.it GARR instance
Done. Andrea Dell'Amico
12:55 PM D4Science Infrastructure Task #10427 (Closed): Rebuild the ip-90-147-167-222.ct1.garrservices.it GARR instance
It fails to reboot because of a problem on the hypervisor Andrea Dell'Amico

Nov 22, 2017

06:21 PM D4Science Infrastructure Task #10147 (Closed): Support varnish as a cache layer in the smartgears nginx
Added a special case for varnish.
Andrea Dell'Amico
06:04 PM D4Science Infrastructure Task #10147 (In Progress): Support varnish as a cache layer in the smartgears nginx
Andrea Dell'Amico
06:01 PM D4Science Infrastructure Task #10153 (Closed): Support more options in the tomcat server.xml connector configuration
Andrea Dell'Amico
05:40 PM D4Science Infrastructure Task #10153 (In Progress): Support more options in the tomcat server.xml connector configuration
Andrea Dell'Amico
03:43 PM D4Science Infrastructure VM Creation #10348: Installation of Virtuoso Triplestore in the infrastructure
Done. You can reach the service as https://virtuoso-catalogue.d4science.org/ (still no valid certificate).
Andrea Dell'Amico
03:36 PM D4Science Infrastructure VM Creation #10348: Installation of Virtuoso Triplestore in the infrastructure
I'm going to add it as a CNAME.
Andrea Dell'Amico
01:19 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
Any progress on this? The deadline was missed already.
Andrea Dell'Amico

Nov 21, 2017

11:19 PM D4Science Infrastructure Task #10287: Schedule downtime for GN DB
Scheduled for tomorrow morning (2017-11-22) Andrea Dell'Amico
07:32 PM D4Science Infrastructure VM Creation #10387: Please create a VM to host parthenos-regsitry for pre-production infrastructure
The deploy fails with the following exception:
~~~
2017-11-21 19:30:29,757 [localhost-startStop-1] ERROR org.apac...
Andrea Dell'Amico
06:53 PM D4Science Infrastructure Task #10377 (Closed): Disable SSL from the pgpool-clustered postgresql instances
Done. Andrea Dell'Amico
06:03 PM D4Science Infrastructure Task #10377 (In Progress): Disable SSL from the pgpool-clustered postgresql instances
Just did in the dev cluster. I'm going to do the same in the production one. Andrea Dell'Amico
05:57 PM D4Science Infrastructure Task #8555: Please provide more resource to Redmine
Luca Frosini wrote:
> Redmine is continuing to degrade. Please find attached the image containing the complete list ...
Andrea Dell'Amico
02:20 PM D4Science Infrastructure Task #9857: Evacuate the hypervisors from dlib14x to dlib19x
The document has just been amended with information that will be useful to schedule the transferts. Andrea Dell'Amico
12:25 PM D4Science Infrastructure Incident #10373 (Feedback): Authorisation service dev and preprod is broken
Andrea Dell'Amico
12:24 PM D4Science Infrastructure Incident #10373: Authorisation service dev and preprod is broken
OK, there were a lot of connections from the authorization that were stuck, some lasting 24 hours. I had to kill post... Andrea Dell'Amico
12:06 PM D4Science Infrastructure Incident #10373: Authorisation service dev and preprod is broken
And I don't see any errors in the authorization logs. Can you give any details?
Andrea Dell'Amico
12:04 PM D4Science Infrastructure Incident #10373: Authorisation service dev and preprod is broken
Hm. But on one of the servers only. The other one has open connections since yesterday:
~~~
postgres 14025 0.0 ...
Andrea Dell'Amico
12:02 PM D4Science Infrastructure Incident #10373: Authorisation service dev and preprod is broken
Wut. Sorry, my fault. I didn't remove a broken script. Andrea Dell'Amico
12:10 PM D4Science Infrastructure VM Creation #10382 (Feedback): Extend Resources to D-Net Index
The cluster is back on line Andrea Dell'Amico
11:42 AM D4Science Infrastructure VM Creation #10382 (In Progress): Extend Resources to D-Net Index
I just destroyed the old VMs and created again with a 250GB volume each.
I'm starting the provisioning right now.
Andrea Dell'Amico

Nov 20, 2017

07:20 PM D4Science Infrastructure VM Creation #10348 (Feedback): Installation of Virtuoso Triplestore in the infrastructure
https://virtuoso-grsf.d4science.org is online. There's no valid X.509 certificate yet, it will be emitted in the next... Andrea Dell'Amico
06:33 PM D4Science Infrastructure VM Creation #10348: Installation of Virtuoso Triplestore in the infrastructure
Provisioning in progress. Andrea Dell'Amico
05:41 PM D4Science Infrastructure VM Creation #10348: Installation of Virtuoso Triplestore in the infrastructure
hostname and IP address are going to be virtuoso-grsf.d4science.org 146.48.123.160 Andrea Dell'Amico
04:24 PM D4Science Infrastructure VM Creation #10348 (In Progress): Installation of Virtuoso Triplestore in the infrastructure
Andrea Dell'Amico
05:57 PM D4Science Infrastructure Task #9368 (Closed): JackRabbit Repo cluster over Postgres for development infra
Andrea Dell'Amico
04:04 PM D4Science Infrastructure Task #9368: JackRabbit Repo cluster over Postgres for development infra
The infrastructure is in place since months. The cluster features aren't used yet but it's not a matter of configurat... Andrea Dell'Amico
03:50 PM D4Science Infrastructure VM Creation #8567 (Closed): New VM to host the EFG D-Net service
Andrea Dell'Amico
03:48 PM D4Science Infrastructure VM Creation #10361 (Closed): Install a new shinyproxy server
Andrea Dell'Amico
03:48 PM D4Science Infrastructure Incident #10372 (Closed): Authorization service: pgpool problem
Andrea Dell'Amico
03:25 PM D4Science Infrastructure Incident #10372: Authorization service: pgpool problem
I'm closing the incident. A permanent solution will be provided in #10377 Andrea Dell'Amico
11:54 AM D4Science Infrastructure Incident #10372 (Feedback): Authorization service: pgpool problem
The auth service is connected to the pgpool service now. I still need to investigate what's happened. I've found that... Andrea Dell'Amico
11:23 AM D4Science Infrastructure Incident #10372 (In Progress): Authorization service: pgpool problem
Andrea Dell'Amico
02:58 PM D4Science Infrastructure Task #10377 (Closed): Disable SSL from the pgpool-clustered postgresql instances
It seems that every problem we've had so far involves the certificate renewals (postgres wants a restart, a reload is... Andrea Dell'Amico
01:00 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
As the playbook didn't change and from what I can see the algorithms installer is working, I guess it's better that @... Andrea Dell'Amico

Nov 19, 2017

09:38 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
Apart from the public/private IP address, there is no other difference between those dataminer and the other GARR one... Andrea Dell'Amico
07:33 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
I checked some of them and I didn't find any tomcat/smartgears related exceptions into the log files.
The dataminer...
Andrea Dell'Amico
04:58 PM D4Science Infrastructure VM Creation #10361: Install a new shinyproxy server
We also have a valid certificate now. Andrea Dell'Amico

Nov 17, 2017

07:52 PM D4Science Infrastructure Task #9857: Evacuate the hypervisors from dlib14x to dlib19x
I see that the document was partially compiled.
We need to know *when* we can restart the production VMs, possibly...
Andrea Dell'Amico
06:57 PM D4Science Infrastructure Task #10358: Dataminer-cluster: Integrate the dm-192-168-100-104.garr.d4science.org instance into the garr cluster
@gianpaolo.coro@isti.cnr.it says it must remain?
Andrea Dell'Amico
06:56 PM D4Science Infrastructure Incident #10310 (Closed): Rebuild two GARR dataminer VMs
Andrea Dell'Amico
06:08 PM D4Science Infrastructure Task #9576 (Closed): provision the smartgear logback configuration starting from a template
Andrea Dell'Amico
03:29 PM D4Science Infrastructure Task #10367 (Closed): Distribute a new letsencrypt configuration on all the hosts
Done. I created a small task under library/generic-tasks that only runs the letsencrypt role. I run it on every playb... Andrea Dell'Amico
12:59 PM D4Science Infrastructure Task #10367 (In Progress): Distribute a new letsencrypt configuration on all the hosts
Andrea Dell'Amico
12:51 PM D4Science Infrastructure Task #10367 (Closed): Distribute a new letsencrypt configuration on all the hosts
letsencrypt changed the TOS, so the client configuration must be changed to obtain new certificates or certificates r... Andrea Dell'Amico
11:44 AM D4Science Infrastructure VM Creation #10361 (Feedback): Install a new shinyproxy server
You now have both http and https. Still a self signed certificate, right now.
Andrea Dell'Amico

Nov 16, 2017

09:43 PM D4Science Infrastructure Task #10279: Large file upload limit on the workspace
Costantino Perciante wrote:
> I guess nginx closes the connection after a while. @andrea.dellamico@isti.cnr.it cou...
Andrea Dell'Amico
09:33 PM D4Science Infrastructure VM Creation #10361 (Closed): Install a new shinyproxy server
Done. We do not have a valid ssh certificate though.
@massimiliano.assante@isti.cnr.it this is the instance to be ...
Andrea Dell'Amico
08:51 PM D4Science Infrastructure VM Creation #10361 (In Progress): Install a new shinyproxy server
Andrea Dell'Amico
08:02 PM D4Science Infrastructure VM Creation #10361: Install a new shinyproxy server
shinyproxy-nauth1.d4science.org. IN A 146.48.123.122 Andrea Dell'Amico
07:58 PM D4Science Infrastructure VM Creation #10361 (Closed): Install a new shinyproxy server
We need a different kind of authentication.
Andrea Dell'Amico
11:12 AM D4Science Infrastructure VM Creation #10356: Provide new VM for hosting a smart-executor service instance with the "accounting-insert-storage-se-plugin" plugin
@luca.frosini@isti.cnr.it is the smart-executor ready to handle the new plugins installation method? Andrea Dell'Amico

Nov 15, 2017

04:25 PM D4Science Infrastructure Task #10351: 404 error of Apache tomcat
The web browser proxies `/ssk` without exception, the 404 is returned by tomcat. It seems that the app does something... Andrea Dell'Amico
04:25 PM D4Science Infrastructure Incident #10306 (In Progress): mongo3-p-d4s.d4science.org went out of memory more than once
I'm reopening it. Let's increase the RAM amount on all the other nodes so that they are identical.
Andrea Dell'Amico
02:38 PM D4Science Infrastructure Incident #10306: mongo3-p-d4s.d4science.org went out of memory more than once
Roberto Cirillo wrote:
> it's ok for me. If it's needed only a VM restart you can do it at any time, if it's neede...
Andrea Dell'Amico
01:04 AM D4Science Infrastructure Task #10328 (Feedback): OpenAIRE datathon schema files
If you need to modify/add/whatever file, you can access the directory with the static content using sftp:
~~~
sft...
Andrea Dell'Amico
01:02 AM D4Science Infrastructure Task #10328 (In Progress): OpenAIRE datathon schema files
Done. You can access the files at these URLs:
http://datathon.openaire.eu/datathon-schema/oaf-common-1.1.xsd
http...
Andrea Dell'Amico

Nov 14, 2017

06:12 PM D4Science Infrastructure Task #10328: OpenAIRE datathon schema files
Hm. I need to pollute the haproxy configuration to setup explicit URL for each one of those. If they must be hidden i... Andrea Dell'Amico

Nov 13, 2017

12:16 PM D4Science Infrastructure Task #10317 (Closed): Increase the resources of dataminer[1:5]-p-d4s.d4science.org

RAM and CPU must be increased to 32GB and 16, respectively. This means that at least three of the VMs have to be mo...
Andrea Dell'Amico
12:11 PM D4Science Infrastructure Task #10316 (Closed): Install the new physical hosts
We need more resource, so we cannot wait anymore.
They must be installed as the other ones, because to successfully ...
Andrea Dell'Amico
11:46 AM D4Science Infrastructure Incident #10306: mongo3-p-d4s.d4science.org went out of memory more than once
Roberto Cirillo wrote:
> It cannot be the cause of the issue #10279 since it is a Secondary member and the writing a...
Andrea Dell'Amico

Nov 12, 2017

03:36 PM D4Science Infrastructure Incident #10310 (Feedback): Rebuild two GARR dataminer VMs
ip-90-147-167-180.ct1.garrservices.it has been provisioned too.
Andrea Dell'Amico
03:17 PM D4Science Infrastructure Incident #10310: Rebuild two GARR dataminer VMs
ip-90-147-167-230.ct1.garrservices.it has been provisioned.
Andrea Dell'Amico
02:55 PM D4Science Infrastructure Incident #10310: Rebuild two GARR dataminer VMs
The VMs have been started, and the original public IP address associated to them. Andrea Dell'Amico
02:54 PM D4Science Infrastructure Incident #10310 (In Progress): Rebuild two GARR dataminer VMs
The VMs are:
~~~
ip-90-147-167-230.ct1.garrservices.it
ip-90-147-167-180.ct1.garrservices.it (this one is a gene...
Andrea Dell'Amico
02:52 PM D4Science Infrastructure Incident #10310 (Closed): Rebuild two GARR dataminer VMs
They fail to restart because of `file system full` on the hypervisor.
Andrea Dell'Amico

Nov 11, 2017

04:18 PM D4Science Infrastructure Task #10240: Install a modern virtualisation framework to host the 'corporate' services
A link that explains a scenario that we can implement: https://ovirt.org/documentation/gluster-hyperconverged/Gluster... Andrea Dell'Amico

Nov 10, 2017

06:44 PM D4Science Infrastructure Task #10261 (Closed): Move to /data nginx temporary files for all Workspace repository nodes
Andrea Dell'Amico
06:44 PM D4Science Infrastructure Incident #10306: mongo3-p-d4s.d4science.org went out of memory more than once
Could it be related to #10279?
Andrea Dell'Amico
06:42 PM D4Science Infrastructure Incident #10306 (Closed): mongo3-p-d4s.d4science.org went out of memory more than once
I see that it was OOMed, and restarted after that. There are nagios alerts about the sync lag, that follow the restar... Andrea Dell'Amico
03:10 PM D4Science Infrastructure Task #10223 (Feedback): Provide machines for FAO course
Done. The hosts that answer to the `dataminer.garr.d4science.org` hostname are now
~~~
- { ip: '192.168.100.3',...
Andrea Dell'Amico
02:27 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
When you confirm that hostname=dm-192-168-100-104.garr.d4science.org can be excluded from the `dataminer.garr.d4scien... Andrea Dell'Amico
09:46 AM D4Science Infrastructure Task #10279: Large file upload limit on the workspace
@costantino.perciante@isti.cnr.it @roberto.cirillo@isti.cnr.it do you find any error on the worskpace?
Andrea Dell'Amico

Nov 09, 2017

07:26 PM D4Science Infrastructure Task #9857: Evacuate the hypervisors from dlib14x to dlib19x
At all involved: please report what of these VMs can be migrated without risks, and which ones need a scheduled downt... Andrea Dell'Amico
05:25 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
Nicolas Longépé wrote:
> What is the user login for the sftp to static-web.d4science.org for the Aquaculture Atlas ?...
Andrea Dell'Amico
03:01 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
I added @nlongepe@cls.fr 's key. Andrea Dell'Amico
02:49 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
So, I'll wait for some tests before adding them to the cloud1 backend. Andrea Dell'Amico
02:42 PM D4Science Infrastructure Task #10279 (Feedback): Large file upload limit on the workspace
Andrea Dell'Amico
02:40 PM D4Science Infrastructure Task #10279 (In Progress): Large file upload limit on the workspace
I increased it to 50GB in the workspace nginx configuration. Andrea Dell'Amico

Nov 08, 2017

08:12 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
I don't know how to help you on this. I made another check and the main page looks always identical to me on every br... Andrea Dell'Amico
07:10 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
Sorry, I can't spot any differences. Screenshots attached. Andrea Dell'Amico
04:15 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
Hm. Where? I don't see any difference on the *browse* and *query* output (safari on OSX, I can test other browsers la... Andrea Dell'Amico
11:52 AM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
Sorry, my bad. When I added the user for aquacultureatlas a ssh configuration was reset to an incorrect value. I just... Andrea Dell'Amico
07:24 PM D4Science Infrastructure Task #10272 (Closed): Script that updates the R packages: kill the old instances if they become stuck
It's working. It will be installed everywhere at the next upgrade.
Andrea Dell'Amico
06:52 PM D4Science Infrastructure Task #10272 (Feedback): Script that updates the R packages: kill the old instances if they become stuck
Need to test it in dev. I also added a check that skips the procedure if nothing changed in the SVN repository.
Andrea Dell'Amico
06:49 PM D4Science Infrastructure Task #10272 (In Progress): Script that updates the R packages: kill the old instances if they become stuck
Andrea Dell'Amico
06:33 PM D4Science Infrastructure Task #10272 (Closed): Script that updates the R packages: kill the old instances if they become stuck
The build of some R packages sometimes get stuck and the update script must be manually killed. Andrea Dell'Amico
07:18 PM D4Science Infrastructure Task #10274: The IRDTunaAtlas R package does not build anymore
Its compilation sometimes get stuck too, so the process must be killed manually. If it isn't needed anymore, can we r... Andrea Dell'Amico
07:15 PM D4Science Infrastructure Task #10274 (Closed): The IRDTunaAtlas R package does not build anymore
Since a long time, apparently. The error log:
~~~
'/usr/lib/R/bin/R' --no-site-file --no-environ --no-save --no-r...
Andrea Dell'Amico
05:41 PM D4Science Infrastructure Task #10270 (Closed): Configure the xen hypervisor to let the guests talk to the storage network
The VMs should be able to talk to the storage network, it's mandatory so that we can host the Ceph monitors in the hy... Andrea Dell'Amico
04:55 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
No probl, but should'nt it better thest them before? I'm confident that they are OK, but at least some minimal test w... Andrea Dell'Amico
03:40 PM D4Science Infrastructure Task #10223 (Feedback): Provide machines for FAO course
Can anybody check them?
Andrea Dell'Amico
03:24 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
The VMs have been provisioned. I'm making them available as single nodes and to the `dataminer.garr.d4science.org` cl... Andrea Dell'Amico
04:18 PM D4Science Infrastructure Task #10264 (Closed): Add /data as separate file system on workspace-repository-prod.d4science.org
The VM is not in use yet, but we will need a temporary storage to manage big uploads.
Andrea Dell'Amico
04:07 PM D4Science Infrastructure Task #10261 (Feedback): Move to /data nginx temporary files for all Workspace repository nodes
Done.
nginx was reloaded and not restarted, so the running upload will fail.
The nginx temporary directory is `...
Andrea Dell'Amico
03:43 PM D4Science Infrastructure Task #10261 (In Progress): Move to /data nginx temporary files for all Workspace repository nodes
Andrea Dell'Amico
03:58 PM D4Science Infrastructure Support #10260 (Closed): access to dataminer-ghost-d.dev.d4science.org
Done. Andrea Dell'Amico
03:55 PM D4Science Infrastructure Support #10260 (In Progress): access to dataminer-ghost-d.dev.d4science.org
Andrea Dell'Amico

Nov 07, 2017

07:17 PM D4Science Infrastructure Task #10223 (In Progress): Provide machines for FAO course
IP and hostnames below, I'll configure them tomorrow. To what cluster do they must be associated? cloud1, with the ot... Andrea Dell'Amico
05:27 PM D4Science Infrastructure Task #10237 (Feedback): Please raise the timeout-limit of virtuoso.parthenos.d4science.org
Andrea Dell'Amico
05:26 PM D4Science Infrastructure Task #10237 (In Progress): Please raise the timeout-limit of virtuoso.parthenos.d4science.org
I just increased the MaxQueryExecutionTime value to 1000 seconds.
Andrea Dell'Amico
04:03 PM D4Science Infrastructure Task #10237: Please raise the timeout-limit of virtuoso.parthenos.d4science.org
From the related ticket it seems that the transaction timeout must be increased: http://docs.openlinksw.com/virtuoso/... Andrea Dell'Amico
04:35 PM D4Science Infrastructure Task #10240 (Closed): Install a modern virtualisation framework to host the 'corporate' services
And the project related services, until we can experiment with OpenStack/Kubernetes.
oVirt https://ovirt.org is th...
Andrea Dell'Amico
04:26 PM D4Science Infrastructure Task #9942: Change the way to generate the logback.xml in smartgears container
Any news on this? Andrea Dell'Amico
04:24 PM D4Science Infrastructure Task #9933 (Closed): Allow to change identity of resource-registry in resource_registry_parthenos ansible playbook
Andrea Dell'Amico
03:34 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
Done. There's no ssl certificate yet for aquacultureatlas.d4science.org.
Andrea Dell'Amico
12:52 PM D4Science Infrastructure Task #5447 (Feedback): Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance
You can now connect via sftp to static-web.d4science.org, this way:
~~~
sftp paim@static-web.d4science.org
sftp ...
Andrea Dell'Amico
12:32 PM D4Science Infrastructure VM Creation #10208 (Closed): A VM to host the PAIM static web applications
The VM is ready, we do not have a valid certificate yet.
ssh has been setup so that the users that belong to the `...
Andrea Dell'Amico
12:15 AM D4Science Infrastructure VM Creation #10208: A VM to host the PAIM static web applications
The playbook is ready (last famous words).
Andrea Dell'Amico

Nov 06, 2017

06:09 PM D4Science Infrastructure Task #10229 (Closed): Do not restart the postgresql instances of a pgpool cluster at the same time
Added a random sleep before the service restart.
Andrea Dell'Amico
06:07 PM D4Science Infrastructure Task #10229 (Closed): Do not restart the postgresql instances of a pgpool cluster at the same time
After a certificate renewal, postgresql needs a full restart because a reload is not sufficient.
If all the instance...
Andrea Dell'Amico
05:45 PM D4Science Infrastructure Support #10222: re-install latest version of dataminer gost on dev environment
@lucio.lelii@isti.cnr.it is going to investigate. Andrea Dell'Amico
04:54 PM D4Science Infrastructure Support #10222 (Closed): re-install latest version of dataminer gost on dev environment
Done.
Andrea Dell'Amico
04:53 PM D4Science Infrastructure Support #10222 (In Progress): re-install latest version of dataminer gost on dev environment
Andrea Dell'Amico
04:46 PM D4Science Infrastructure Support #10222: re-install latest version of dataminer gost on dev environment
What problems? Andrea Dell'Amico
05:36 PM D4Science Infrastructure Task #10223: Provide machines for FAO course
We can create 11 full sized dataminers at most, before reaching our quota memory limit. Andrea Dell'Amico
02:37 PM D4Science Infrastructure Support #10214 (Closed): access to dm-pool-manager-dev.d4science.org
Done. Andrea Dell'Amico
01:53 PM D4Science Infrastructure VM Creation #10208 (In Progress): A VM to host the PAIM static web applications
static-web.d4science.org 146.48.123.62 Andrea Dell'Amico
11:57 AM D4Science Infrastructure VM Creation #10060: TextCrowd DataMiner - create a new DataMiner instance for TextCrowd
Roberto Cirillo wrote:
> I'm going to install the smartgears container and the dataminer instance
Why? they are i...
Andrea Dell'Amico
 

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