D4science

Oct 27, 2016

06:48 PM D4Science Infrastructure Task #5590: DataMiner as Generic Worker

yes! Gianpaolo Coro

06:32 PM D4Science Infrastructure Task #5590 (Closed): DataMiner as Generic Worker

DataMiner should substitute the Generic Workers already from r4.1.0. The old GW should be shutdown. Three DataMiner a... Gianpaolo Coro

Oct 25, 2016

02:44 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance

Sorry, I don't understand. The Workspace is an online file system, Apache is a server and the Web app a sort of servi... Gianpaolo Coro

01:14 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance

Hi Emmanuel, the WebApp is using an old DataTransfer technology we inherited from CERN. Hopefully from the next relea... Gianpaolo Coro

Oct 24, 2016

07:28 PM D4Science Infrastructure Task #4371: same R configuration (R version and packages) on R-Studio as the one on machine(s) used by Dataminer.

Could you please install it on dataminer1-devnext?
What happens if one of the packages has typo? The complete instal... Gianpaolo Coro

10:23 AM D4Science Infrastructure Task #5452: Is it possible to have a simple way for users to check that RStudio & Dataminer configs are aligned?

due to changes in a related task Gianpaolo Coro

10:13 AM D4Science Infrastructure Task #4372 (Closed): open some workspace repositories (directories) containing R Scripts directly from Rstudio

I guess this request can be managed in #5459 Gianpaolo Coro

Oct 21, 2016

02:51 PM D4Science Infrastructure Task #4371: same R configuration (R version and packages) on R-Studio as the one on machine(s) used by Dataminer.

Here is the SVN folder:
https://svn.d4science.research-infrastructures.eu/gcube/trunk/data-analysis/RConfiguration... Gianpaolo Coro

Oct 14, 2016

11:39 AM D4Science Infrastructure Task #2174: Dataminer and Statistical Manager packages

install_github("flr/FLCore")
install_github("flr/FLash")
install_github("flr/FLAssess")
install_github("flr/gg... Gianpaolo Coro

Oct 07, 2016

06:13 PM D4Science Infrastructure Task #5452: Is it possible to have a simple way for users to check that RStudio & Dataminer configs are aligned?

The Dataminer has been recently restarted several times in the RPrototypingLab thus the locale has been reloaded. In ... Gianpaolo Coro

01:11 PM D4Science Infrastructure Task #5452: Is it possible to have a simple way for users to check that RStudio & Dataminer configs are aligned?

Hi Emmanuel, are you sure you are not using the RStudioLab or the StockAssessment VRE? IRD was using these two.
T... Gianpaolo Coro

12:46 PM D4Science Infrastructure Task #5452: Is it possible to have a simple way for users to check that RStudio & Dataminer configs are aligned?

Hi Emmanuel, your request is right and a process will be implemented to give you this information.
For the time bei... Gianpaolo Coro

01:03 PM D4Science Infrastructure Task #5447: Provide maintainable solution for hosting static web-apps + SFTP access for easy maintenance

The WebApp publisher is a process of Dataminer and, as such, all the information about a Web application is stored on... Gianpaolo Coro

Oct 06, 2016

05:39 PM D4Science Infrastructure Task #4919 (Closed): Enhance raster data metadata for the data catalogue

Gianpaolo Coro

04:20 PM D4Science Infrastructure Task #5440 (Closed): DataMiner in the SoBigData.eu VRE

DataMiner is required in the SoBigData.eu VRE:
https://services.d4science.org/group/sobigdata.eu
The required res... Gianpaolo Coro

Oct 05, 2016

06:00 PM D4Science Infrastructure Task #5169 (Closed): Prepare environment to test Generic Worker on Dataminer

Tests have been done with Cloud computing algorithms using two DataMiners as Worker nodes. Everything works fine with... Gianpaolo Coro

01:22 PM D4Science Infrastructure Task #5169: Prepare environment to test Generic Worker on Dataminer

The issue was due to a common-scope library left in the web application. The newly installed service works. All the r... Gianpaolo Coro

12:11 PM D4Science Infrastructure Task #5169: Prepare environment to test Generic Worker on Dataminer

I'm calling the service with the NextNext token, but I see these errors on the GHN referring to the gCubeApps scope:
... Gianpaolo Coro

12:31 AM D4Science Infrastructure Task #5169: Prepare environment to test Generic Worker on Dataminer

Could you retry now please?
Anyway, I fear that some snapshots of the authorization libraries are not updated. Plea... Gianpaolo Coro

Oct 04, 2016

04:22 PM D4Science Infrastructure Task #5359: Endpoint access

Hi Denis, yes, the RPrototypeLab substitutes the dev. environment for you and acts like a pre-production environment ... Gianpaolo Coro

01:54 PM D4Science Infrastructure Task #5359: Endpoint access

During the creation phase of a VRE (or after), Dataminer should be explicitly requested along with algorithms. Depend... Gianpaolo Coro

10:34 AM D4Science Infrastructure Task #5169: Prepare environment to test Generic Worker on Dataminer

The GW-Dataminer machines should be placed behind a proxy named dataminer-d-workers.d4science.org Gianpaolo Coro

Oct 03, 2016

09:39 PM D4Science Infrastructure Task #5359: Endpoint access

Dear Denis, differently from the development environment, in the production environment DataMiner is a cluster of mac... Gianpaolo Coro

Sep 30, 2016

05:20 PM D4Science Infrastructure Task #5290: Align DataMiner Locale to the RStudio Locale

Yes, the request is to have UTF-8 everywhere Gianpaolo Coro

03:37 PM D4Science Infrastructure Task #5290 (Closed): Align DataMiner Locale to the RStudio Locale

As reported in #4652#note-24, the system Locale is equal to "C" on DataMiner, whereas it is UTF-8 on RStudio. The Dat... Gianpaolo Coro

Sep 29, 2016

06:47 PM D4Science Infrastructure Incident #5241 (Closed): Environmental layers not visible in RPrototypingLab

It works! I guess the same issue is in the Dev environment. Could you please fix it there too? Gianpaolo Coro

06:22 PM D4Science Infrastructure Incident #5241: Environmental layers not visible in RPrototypingLab

I have published the layers at VO level-gCubeApps (SCOPE) and I can see them if I make a query from a client.
We sh... Gianpaolo Coro

05:07 PM D4Science Infrastructure Incident #5241 (Closed): Environmental layers not visible in RPrototypingLab

The GeoExplorer in the RPrototypingLab does not find the environmental layers that have been published at VO level. T... Gianpaolo Coro

06:41 PM D4Science Infrastructure Support #5242 (Feedback): publishing the "STEP_3___VPA_ICCAT_BFT_E_Projection" algorithm in the production environment

They should be updated now. Gianpaolo Coro

06:29 PM D4Science Infrastructure Support #5242 (In Progress): publishing the "STEP_3___VPA_ICCAT_BFT_E_Projection" algorithm in the production environment

I'm going to publish the version that is currently running in the Prototyping environment. Gianpaolo Coro

04:11 PM D4Science Infrastructure Support #5236: publishing the "Whole_Steps_VPA_ICCAT_BFT_E" algorithm in the production environment

I guess you have a browser caching. Could you please logout+ press SHIFT+F5 and click this link?
~~~
https://i-ma... Gianpaolo Coro

04:02 PM D4Science Infrastructure Support #5236: publishing the "Whole_Steps_VPA_ICCAT_BFT_E" algorithm in the production environment

Could you please logout and get in again? Gianpaolo Coro

03:38 PM D4Science Infrastructure Support #5236 (Feedback): publishing the "Whole_Steps_VPA_ICCAT_BFT_E" algorithm in the production environment

Done, please check if it works. Gianpaolo Coro

03:11 PM D4Science Infrastructure Support #5236: publishing the "Whole_Steps_VPA_ICCAT_BFT_E" algorithm in the production environment

Dear Taha, could you please confirm that you did not re-created the algorithm, i.e. that you want the version that is... Gianpaolo Coro

02:52 PM D4Science Infrastructure Task #5169: Prepare environment to test Generic Worker on Dataminer

I have organised the DataMiner pom in order to limit the spread of dependencies and to detect the libraries that shou... Gianpaolo Coro

02:26 PM D4Science Infrastructure Support #5130: Add applications to the prototyping VRE

Moved to higher priority due to the switch of the users from the devVRE to the Proto VRE. Gianpaolo Coro

02:25 PM D4Science Infrastructure Support #5159: Dataminer in the BiodiversityLab VRE

Switched to higher priority due to the next demonstration to be done at the SeaDataNet conference. Gianpaolo Coro

09:59 AM D4Science Infrastructure Task #5215: Social Networking facilities required in devVRE

Yes, at least I would like to create a post that should go to all the users registered on the dev.d4science.org portal. Gianpaolo Coro

Sep 28, 2016

10:09 PM D4Science Infrastructure Task #5215 (Closed): Social Networking facilities required in devVRE

Since we have moved the algorithms development environment to the production environment, the social networking facil... Gianpaolo Coro