D4science

Jul 14, 2015

03:10 PM D4Science Infrastructure Task #299 (Closed): New VM to host a Virtuoso instance

The VM is running virtuoso 7.2.
There's now a playbook that manages the virtuoso install and basic configuration.
Andrea Dell'Amico

01:17 PM D4Science Infrastructure Task #386 (Closed): ssl certificate for ldap-liferay.d4science.org

A x.509 certificate is needed
Andrea Dell'Amico

Jul 13, 2015

06:46 PM D4Science Infrastructure Task #297 (In Progress): New ldap instance

The VM is up and running.
We are setting che new configuration up.
Andrea Dell'Amico

05:48 PM D4Science Infrastructure Task #373 (Closed): New VM for the Mincyt project

The VM has been configured.
Andrea Dell'Amico

01:31 PM D4Science Infrastructure Task #373 (In Progress): New VM for the Mincyt project

Andrea Dell'Amico

01:31 PM D4Science Infrastructure Task #373 (Closed): New VM for the Mincyt project

See https://issue.openaire.research-infrastructures.eu/issues/1424 for the details Andrea Dell'Amico

Jul 09, 2015

03:03 PM D4Science Infrastructure Task #299: New VM to host a Virtuoso instance

The progress (or lack of) can be followed here: https://issue.openaire.research-infrastructures.eu/issues/1391 Andrea Dell'Amico

Jul 08, 2015

04:30 PM D4Science Infrastructure Task #364 (Closed): Nagios: create a new hostgroup and assign all the CNR monitored hosts to it

We need a way to list all the monitored hosts that run inside our data center.
Andrea Dell'Amico

04:09 PM D4Science Infrastructure Task #362: Limit HTTP Method on accounting-d4s.d4science.org

Do you need this now? It can be done putting an haproxy instance in front of couchdb, and that's the plan for the pro... Andrea Dell'Amico

Jul 06, 2015

04:41 PM D4Science Infrastructure Task #281 (Closed): Move to the D4Science.org domain from the Research infrastructure domain

ssl is enabled for both ci.research-infrastructures.eu and ci.d4science.org.
Plain http requests are redirected to... Andrea Dell'Amico

04:19 PM D4Science Infrastructure Task #308 (Closed): SSL certificates needed for nexus.d4science.org and ci.d4science.org

The certificates are in place. Andrea Dell'Amico

Jul 03, 2015

05:08 PM D4Science Infrastructure Task #317: manage.research-infrastructures.eu needs some love

Another problem I've just run into: it does not support UTF8. But could it be a LDAP encoding problem?
Andrea Dell'Amico

04:00 PM D4Science Infrastructure Task #324 (Paused): Install haproxy as couchdb frontend

Andrea Dell'Amico

04:00 PM D4Science Infrastructure Task #324 (In Progress): Install haproxy as couchdb frontend

haproxy is the default proxy to split the requests to a couchdb cluster > 2.0. We will configure it when a 2.0 cluste... Andrea Dell'Amico

03:59 PM D4Science Infrastructure Task #325 (Paused): Nagios monitoring for couchdb

Andrea Dell'Amico

03:58 PM D4Science Infrastructure Task #325 (In Progress): Nagios monitoring for couchdb

We will set up the monitoring infrastructure for the 2.0 version. Andrea Dell'Amico

03:57 PM D4Science Infrastructure Task #323 (Paused): Install couchdb 2.0 with fauxton

Andrea Dell'Amico

03:57 PM D4Science Infrastructure Task #323 (In Progress): Install couchdb 2.0 with fauxton

couchdb 2.0 is a pain to compile and after a lot of manual tweaking it does not start. We will try again when the s... Andrea Dell'Amico

03:56 PM D4Science Infrastructure Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster

couchdb 2.0 is still too immature to be used.
There's a single couchdb 1.6.1 instance answering at http://accounti... Andrea Dell'Amico

12:31 PM D4Science Infrastructure Task #348 (Closed): Reset crontab required on the development environment AMQ

Andrea Dell'Amico

12:31 PM D4Science Infrastructure Task #348 (In Progress): Reset crontab required on the development environment AMQ

Done:
~~~
00 00 * * 0 /root/restartBroker.sh > /root/restartBroker.log 2>&1
~~~ Andrea Dell'Amico

Jun 30, 2015

12:26 PM D4Science Infrastructure Task #325 (Closed): Nagios monitoring for couchdb

* nagios
* ganglia
Andrea Dell'Amico

12:25 PM D4Science Infrastructure Task #324 (Closed): Install haproxy as couchdb frontend

* Install haproxy on accounting-d4s.d4science.org
* Configure haproxy as couchdb frontend Andrea Dell'Amico

12:24 PM D4Science Infrastructure Task #323 (Closed): Install couchdb 2.0 with fauxton

Install coucdb0[1:4]-d4s.d4science.org with couchdb 2.0 and fauxton
Andrea Dell'Amico

12:18 PM D4Science Infrastructure Task #294 (Closed): SSL certificates for the couchdb cluster

Andrea Dell'Amico

Jun 29, 2015

07:57 PM D4Science Infrastructure Task #299: New VM to host a Virtuoso instance

Added a role that installs virtuoso from the ubuntu packages and sets a more sane 'virtuoso' user instead of root.
Andrea Dell'Amico

Jun 26, 2015

06:27 PM D4Science Infrastructure Task #317: manage.research-infrastructures.eu needs some love

I forgot: the ability to bulk add users from a text file.
Andrea Dell'Amico

06:26 PM D4Science Infrastructure Task #317 (Rejected): manage.research-infrastructures.eu needs some love

The application needs a better look and lacks some basic functionalities. While waiting a more modern authentication ... Andrea Dell'Amico

02:29 PM D4Science Infrastructure Task #172: Shut down the old d4science Trac instance

Pasquale Pagano wrote:
> According to my knowledge
>
> > d4science.research-infrastructures.eu
> - to be dismis... Andrea Dell'Amico

01:45 PM D4Science Infrastructure Support #306 (Feedback): Install additional R packages on the Worker nodes to support IRD - IFREMER computations

The two plugins are installed on all the worker nodes. Hope I got the right nodes list:
~~~
node11.d4science.org ... Andrea Dell'Amico

01:43 PM D4Science Infrastructure Support #306: Install additional R packages on the Worker nodes to support IRD - IFREMER computations

I added a new script called `install_R_modules.sh` inside the d4science-ghn-cluster.
It runs the playbook with the... Andrea Dell'Amico

01:41 PM D4Science Infrastructure Task #315 (Closed): Expand the R ansible role to let it install R plugins from sources

Andrea Dell'Amico

01:41 PM D4Science Infrastructure Task #315 (In Progress): Expand the R ansible role to let it install R plugins from sources

The source files are downloaded inside /var/cache/R and installed from there.
Andrea Dell'Amico

01:40 PM D4Science Infrastructure Task #315 (Closed): Expand the R ansible role to let it install R plugins from sources

Some R plugins need to be installed from source.
Add this step to the library R role. Andrea Dell'Amico

Jun 25, 2015

05:53 PM D4Science Infrastructure Task #299: New VM to host a Virtuoso instance

We will start with a 300GB data disk Andrea Dell'Amico

05:33 PM D4Science Infrastructure Task #299 (In Progress): New VM to host a Virtuoso instance

Other requirements:
8 GB RAM
2 CPUs
1 TB data disk
Andrea Dell'Amico

05:32 PM D4Science Infrastructure Task #299: New VM to host a Virtuoso instance

The new VM hostname will be virtuoso-openaire.d4science.org. Its IP 146.48.123.6.
Andrea Dell'Amico

05:36 PM D4Science Infrastructure Support #306 (In Progress): Install additional R packages on the Worker nodes to support IRD - IFREMER computations

Only a fraction of the worker nodes are installed via the provisioning system. I'm going to create a (hopefully) temp... Andrea Dell'Amico

05:32 PM D4Science Infrastructure Task #301 (Closed): New servername for node0.d.dli.research-infrastructures.eu

Andrea Dell'Amico

01:11 PM D4Science Infrastructure Task #301 (Feedback): New servername for node0.d.dli.research-infrastructures.eu

Done. Andrea Dell'Amico

11:32 AM D4Science Infrastructure Task #301 (In Progress): New servername for node0.d.dli.research-infrastructures.eu

The hostname has been registered on the DNS server.
The virtualhost is ready to be provided.
Andrea Dell'Amico

11:13 AM D4Science Infrastructure Task #301 (Closed): New servername for node0.d.dli.research-infrastructures.eu

The hostname is crossdata.research-infrastructure.eu and needs to be associated to a virtualhost that redirects all t... Andrea Dell'Amico

04:09 PM D4Science Infrastructure Task #281: Move to the D4Science.org domain from the Research infrastructure domain

The new URL are now working for plain http.
Andrea Dell'Amico

03:42 PM D4Science Infrastructure Task #281 (In Progress): Move to the D4Science.org domain from the Research infrastructure domain

Added nexus.d4science.org as CNAME for maven.research-infrastructures.eu and ci.d4science.org as CNAME for master.ci.... Andrea Dell'Amico

03:44 PM D4Science Infrastructure Task #308: SSL certificates needed for nexus.d4science.org and ci.d4science.org

Andrea Dell'Amico wrote:
> We need SSL certificates for the two hosts:
>
> nexus.d4science.org
> ci.d4science.or... Andrea Dell'Amico

03:38 PM D4Science Infrastructure Task #308 (Closed): SSL certificates needed for nexus.d4science.org and ci.d4science.org

We need SSL certificates for the two hosts:
nexus.d4science.org
ci.d4science.org Andrea Dell'Amico

03:29 PM D4Science Infrastructure Task #307 (Closed): New SSL certificates for manage.research-infrastructures.eu and issue.openaire.research-infrastructures.eu

The two services need certificates from a _known_ CA. Andrea Dell'Amico

Jun 24, 2015

08:40 PM D4Science Infrastructure Support #300 (Closed): Add the D-Net people to the d4science project

The D-Net people need access to the d4science infrastructure project Andrea Dell'Amico

08:38 PM D4Science Infrastructure Task #299 (Closed): New VM to host a Virtuoso instance

A new VM is needed to host a virtuoso install for the OpenAire project. See https://issue.openaire.research-infrastru... Andrea Dell'Amico

04:48 PM D4Science Infrastructure Task #294 (In Progress): SSL certificates for the couchdb cluster

We only need a certificate for accounting-d4s.d4science.org, for now.
Andrea Dell'Amico

12:05 PM D4Science Infrastructure Task #294 (Paused): SSL certificates for the couchdb cluster

We have to wait, the final architecture could be different. Andrea Dell'Amico

12:04 PM D4Science Infrastructure Task #294 (In Progress): SSL certificates for the couchdb cluster

Andrea Dell'Amico

04:47 PM D4Science Infrastructure Task #279 (Closed): Install the Fauxton couchdb interface

This becomes part of the couchdb 2.0 install
Andrea Dell'Amico

04:46 PM D4Science Infrastructure Task #110 (In Progress): Create 3 Virtual Machine for developement to host new noSQL Db cluster

couchdb 1.6 is too limited and its replica mechanism very fragile.
The still unreleased 2.0 version has a better c... Andrea Dell'Amico

12:10 PM D4Science Infrastructure Task #297 (Closed): New ldap instance

A new (open)ldap instance is needed.
It will be used by liferay to memorize the users registered on the portals and ... Andrea Dell'Amico

Jun 23, 2015

05:40 PM D4Science Infrastructure Task #110 (Feedback): Create 3 Virtual Machine for developement to host new noSQL Db cluster

Andrea Dell'Amico

05:40 PM D4Science Infrastructure Task #110 (In Progress): Create 3 Virtual Machine for developement to host new noSQL Db cluster

Andrea Dell'Amico

04:57 PM D4Science Infrastructure Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster

The three machines are configured. There is an admin user.
Andrea Dell'Amico

05:40 PM D4Science Infrastructure Task #279 (In Progress): Install the Fauxton couchdb interface

The git repo: https://github.com/apache/couchdb-fauxton Andrea Dell'Amico

05:10 PM D4Science Infrastructure Task #294 (Closed): SSL certificates for the couchdb cluster

Four cerficates are needed for the hosts:
couchdb01-d4s.d4science.org
couchdb02-d4s.d4science.org
couchdb03-d4s.d4... Andrea Dell'Amico

04:09 PM D4Science Infrastructure Task #293: Make any Liferay user to access Redmine (through LDAP Credentials)

Massimiliano Assante wrote:
> The Redmine instance for a given project should be accessed by any VRE user serving th... Andrea Dell'Amico

Jun 19, 2015

03:53 PM D4Science Infrastructure Task #87: Make new gCube and D4Science wiki available only on https

The ssl certificates are in place. To enable ssl the needed steps are:
Set
~~~
http_ssl_enabled
~~~
to *True*
... Andrea Dell'Amico

03:47 PM D4Science Infrastructure Task #85: Deploy wikimedia on wiki.gcube-system.org and wiki.d4science.org

Two mediawiki instances are now deployed on wiki.d4science.org. The root directories are:
~~~
ls -l /var/www/
... Andrea Dell'Amico

03:16 PM D4Science Infrastructure Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster

The latest stable version has a PPA, here: https://launchpad.net/~couchdb/+archive/ubuntu/stable
Andrea Dell'Amico

03:13 PM D4Science Infrastructure Task #110: Create 3 Virtual Machine for developement to host new noSQL Db cluster

The VMs will be: couch{01:03}-d4s.d4science.org.
The same cluster will serve devel and production.
Andrea Dell'Amico

03:15 PM D4Science Infrastructure Task #279 (Closed): Install the Fauxton couchdb interface

On a dedicated machine. Needs node.js.
fauxton-d4s.d4science.org
Andrea Dell'Amico